RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 A0A0G2JS52 829 aa22.16■■□□□ 1.14
CDR2-206ENST00000567406 MYT1Q01538 1121 aa22.16■■□□□ 1.14
CDR2-206ENST00000567406 FAM98CQ17RN3 349 aaKnown RBP22.15■■□□□ 1.14
CDR2-206ENST00000567406 CCDC125Q86Z20 511 aa22.15■■□□□ 1.14
CDR2-206ENST00000567406 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.13
CDR2-206ENST00000567406 DEFB132Q7Z7B7 95 aa22.14■■□□□ 1.13
CDR2-206ENST00000567406 KRT27Q7Z3Y8 459 aa22.13■■□□□ 1.13
CDR2-206ENST00000567406 ACEP12821 1306 aa22.12■■□□□ 1.13
CDR2-206ENST00000567406 NRAPQ86VF7 1730 aa22.12■■□□□ 1.13
CDR2-206ENST00000567406 CHRNA2Q15822 529 aa22.12■■□□□ 1.13
CDR2-206ENST00000567406 SIN3AQ96ST3 1273 aa22.12■■□□□ 1.13
CDR2-206ENST00000567406 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
CDR2-206ENST00000567406 PRDM11Q9NQV5 511 aa22.11■■□□□ 1.13
CDR2-206ENST00000567406 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
CDR2-206ENST00000567406 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
CDR2-206ENST00000567406 BLMP54132 1417 aaPredicted RBP22.1■■□□□ 1.13
CDR2-206ENST00000567406 ZC3H6P61129 1189 aaKnown RBP22.1■■□□□ 1.13
CDR2-206ENST00000567406 KIAA1210Q9ULL0 1709 aa22.1■■□□□ 1.13
CDR2-206ENST00000567406 CRYBG1Q9Y4K1 1723 aa22.1■■□□□ 1.13
CDR2-206ENST00000567406 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
CDR2-206ENST00000567406 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
CDR2-206ENST00000567406 FAM182BQ5T319 152 aa22.09■■□□□ 1.13
CDR2-206ENST00000567406 L3MBTL2Q969R5 705 aa22.09■■□□□ 1.13
CDR2-206ENST00000567406 CABP2Q9NPB3 220 aa22.09■■□□□ 1.13
CDR2-206ENST00000567406 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
CDR2-206ENST00000567406 SRPK2P78362 688 aaKnown RBP22.08■■□□□ 1.13
CDR2-206ENST00000567406 PLEKHG3A1L390 1219 aa22.07■■□□□ 1.12
CDR2-206ENST00000567406 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
CDR2-206ENST00000567406 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
CDR2-206ENST00000567406 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
CDR2-206ENST00000567406 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
CDR2-206ENST00000567406 SF3B2Q13435 895 aaKnown RBP22.06■■□□□ 1.12
CDR2-206ENST00000567406 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
CDR2-206ENST00000567406 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
CDR2-206ENST00000567406 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
CDR2-206ENST00000567406 ABTB2Q8N961 1025 aa22.04■■□□□ 1.12
CDR2-206ENST00000567406 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.12
CDR2-206ENST00000567406 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
CDR2-206ENST00000567406 USP35Q9P2H5 1018 aa22.01■■□□□ 1.11
CDR2-206ENST00000567406 CABP1Q9NZU7 370 aa22■■□□□ 1.11
CDR2-206ENST00000567406 QRICH2Q9H0J4 1663 aa21.99■■□□□ 1.11
CDR2-206ENST00000567406 SPATA31A1Q5TZJ5 1347 aa21.99■■□□□ 1.11
CDR2-206ENST00000567406 EVA1CP58658 441 aa21.98■■□□□ 1.11
CDR2-206ENST00000567406 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
CDR2-206ENST00000567406 LARP1Q6PKG0 1096 aaKnown RBP21.95■■□□□ 1.1
CDR2-206ENST00000567406 NRKQ7Z2Y5 1582 aa21.95■■□□□ 1.1
CDR2-206ENST00000567406 THSD7AQ9UPZ6 1657 aa21.95■■□□□ 1.1
CDR2-206ENST00000567406 GCP02774 474 aa21.94■■□□□ 1.1
CDR2-206ENST00000567406 BAG6P46379 1132 aa21.94■■□□□ 1.1
CDR2-206ENST00000567406 EN1Q05925 392 aaPredicted RBP21.94■■□□□ 1.1
CDR2-206ENST00000567406 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
CDR2-206ENST00000567406 USP19O94966 1318 aa21.94■■□□□ 1.1
CDR2-206ENST00000567406 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
CDR2-206ENST00000567406 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
CDR2-206ENST00000567406 SSH2Q76I76 1423 aa21.92■■□□□ 1.1
CDR2-206ENST00000567406 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
CDR2-206ENST00000567406 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
CDR2-206ENST00000567406 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
CDR2-206ENST00000567406 NLRP6P59044 892 aa21.91■■□□□ 1.1
CDR2-206ENST00000567406 TRIM37O94972 964 aa21.9■■□□□ 1.1
CDR2-206ENST00000567406 USP6P35125 1406 aa21.89■■□□□ 1.1
CDR2-206ENST00000567406 CPDO75976 1380 aa21.89■■□□□ 1.1
CDR2-206ENST00000567406 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
CDR2-206ENST00000567406 EZH2Q15910 746 aaKnown RBP21.86■■□□□ 1.09
CDR2-206ENST00000567406 BARGINQ6ZT62 677 aa21.86■■□□□ 1.09
CDR2-206ENST00000567406 TCP11L2Q8N4U5 519 aa21.86■■□□□ 1.09
CDR2-206ENST00000567406 RGPD1P0DJD0 1748 aa21.86■■□□□ 1.09
CDR2-206ENST00000567406 SOX12O15370 315 aa21.85■■□□□ 1.09
CDR2-206ENST00000567406 PDE3BQ13370 1112 aa21.85■■□□□ 1.09
CDR2-206ENST00000567406 FAM196AQ6ZSG2 479 aa21.85■■□□□ 1.09
CDR2-206ENST00000567406 TNS1Q9HBL0 1735 aaKnown RBP21.83■■□□□ 1.08
CDR2-206ENST00000567406 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.08
CDR2-206ENST00000567406 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
CDR2-206ENST00000567406 PIK3C2AO00443 1686 aa21.82■■□□□ 1.08
CDR2-206ENST00000567406 APBA3O96018 575 aa21.82■■□□□ 1.08
CDR2-206ENST00000567406 AXIN2Q9Y2T1 843 aa21.82■■□□□ 1.08
CDR2-206ENST00000567406 BRD4O60885 1362 aaPredicted RBP21.82■■□□□ 1.08
CDR2-206ENST00000567406 R3HDM1Q15032 1099 aaKnown RBP21.81■■□□□ 1.08
CDR2-206ENST00000567406 CAMKK2Q96RR4 588 aa21.8■■□□□ 1.08
CDR2-206ENST00000567406 SLIT3O75094 1523 aa21.8■■□□□ 1.08
CDR2-206ENST00000567406 CARD11Q9BXL7 1154 aa21.79■■□□□ 1.08
CDR2-206ENST00000567406 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
CDR2-206ENST00000567406 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
CDR2-206ENST00000567406 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
CDR2-206ENST00000567406 TOM1L2Q6ZVM7 507 aa21.77■■□□□ 1.08
CDR2-206ENST00000567406 DISP2A7MBM2 1401 aa21.77■■□□□ 1.08
CDR2-206ENST00000567406 CRB1P82279 1406 aa21.77■■□□□ 1.08
CDR2-206ENST00000567406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.07
CDR2-206ENST00000567406 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
CDR2-206ENST00000567406 KTN1Q86UP2 1357 aaKnown RBP21.75■■□□□ 1.07
CDR2-206ENST00000567406 COL18A1P39060 1754 aa21.75■■□□□ 1.07
CDR2-206ENST00000567406 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
CDR2-206ENST00000567406 ARHGEF25Q86VW2 580 aa21.74■■□□□ 1.07
CDR2-206ENST00000567406 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
CDR2-206ENST00000567406 RGPD5Q99666 1765 aa21.73■■□□□ 1.07
CDR2-206ENST00000567406 TTC21AQ8NDW8 1320 aa21.72■■□□□ 1.07
CDR2-206ENST00000567406 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
CDR2-206ENST00000567406 CSB-PGBD3P0DP91 1061 aa21.71■■□□□ 1.07
CDR2-206ENST00000567406 NME9Q86XW9 330 aa21.71■■□□□ 1.07
CDR2-206ENST00000567406 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms