RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 ROCK2O75116 1388 aaKnown RBP10.84□□□□□ -0.67
GINS3-207ENST00000567400 PHRF1Q9P1Y6 1649 aaKnown RBP10.84□□□□□ -0.67
GINS3-207ENST00000567400 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 UNC5CLQ8IV45 518 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 NGDNQ8NEJ9 315 aaKnown RBP10.83□□□□□ -0.68
GINS3-207ENST00000567400 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 ACEP12821 1306 aa10.83□□□□□ -0.68
GINS3-207ENST00000567400 GJD4Q96KN9 370 aaPredicted RBP10.82□□□□□ -0.68
GINS3-207ENST00000567400 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
GINS3-207ENST00000567400 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
GINS3-207ENST00000567400 NRKQ7Z2Y5 1582 aa10.82□□□□□ -0.68
GINS3-207ENST00000567400 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
GINS3-207ENST00000567400 BRWD3Q6RI45 1802 aa10.8□□□□□ -0.68
GINS3-207ENST00000567400 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
GINS3-207ENST00000567400 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
GINS3-207ENST00000567400 USP6P35125 1406 aa10.79□□□□□ -0.68
GINS3-207ENST00000567400 SSH2Q76I76 1423 aa10.79□□□□□ -0.68
GINS3-207ENST00000567400 VPS72Q15906 364 aa10.79□□□□□ -0.68
GINS3-207ENST00000567400 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 SBNO2Q9Y2G9 1366 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 USP19O94966 1318 aa10.78□□□□□ -0.68
GINS3-207ENST00000567400 ATAD2Q6PL18 1390 aa10.77□□□□□ -0.68
GINS3-207ENST00000567400 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
GINS3-207ENST00000567400 LMO7Q8WWI1 1683 aa10.77□□□□□ -0.69
GINS3-207ENST00000567400 BTG4Q9NY30 223 aa10.77□□□□□ -0.69
GINS3-207ENST00000567400 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
GINS3-207ENST00000567400 AKAP12Q02952 1782 aa10.77□□□□□ -0.69
GINS3-207ENST00000567400 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
GINS3-207ENST00000567400 THSD7AQ9UPZ6 1657 aa10.76□□□□□ -0.69
GINS3-207ENST00000567400 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
GINS3-207ENST00000567400 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 SLIT3O75094 1523 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 CHRNA2Q15822 529 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 CARD11Q9BXL7 1154 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 PRDM11Q9NQV5 511 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 CAMTA1Q9Y6Y1 1673 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 CPDO75976 1380 aa10.75□□□□□ -0.69
GINS3-207ENST00000567400 CD163L1Q9NR16 1453 aa10.74□□□□□ -0.69
GINS3-207ENST00000567400 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
GINS3-207ENST00000567400 SEPT12Q8IYM1 358 aa10.74□□□□□ -0.69
GINS3-207ENST00000567400 MON2Q7Z3U7 1717 aa10.74□□□□□ -0.69
GINS3-207ENST00000567400 BRD4O60885 1362 aaPredicted RBP10.74□□□□□ -0.69
GINS3-207ENST00000567400 SPATA31A5Q5VU36 1347 aa10.73□□□□□ -0.69
GINS3-207ENST00000567400 SPATA31A7Q8IWB4 1347 aa10.73□□□□□ -0.69
GINS3-207ENST00000567400 GCP02774 474 aa10.72□□□□□ -0.69
GINS3-207ENST00000567400 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
GINS3-207ENST00000567400 TESK2Q96S53 571 aa10.72□□□□□ -0.69
GINS3-207ENST00000567400 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
GINS3-207ENST00000567400 COL5A2P05997 1499 aaPredicted RBP10.71□□□□□ -0.69
GINS3-207ENST00000567400 COL18A1P39060 1754 aa10.71□□□□□ -0.69
GINS3-207ENST00000567400 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
GINS3-207ENST00000567400 NFAT5O94916 1531 aa10.7□□□□□ -0.7
GINS3-207ENST00000567400 SPATA31A1Q5TZJ5 1347 aa10.7□□□□□ -0.7
GINS3-207ENST00000567400 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
GINS3-207ENST00000567400 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
GINS3-207ENST00000567400 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
GINS3-207ENST00000567400 KTN1Q86UP2 1357 aaKnown RBP10.69□□□□□ -0.7
GINS3-207ENST00000567400 NLRP6P59044 892 aa10.69□□□□□ -0.7
GINS3-207ENST00000567400 KRT27Q7Z3Y8 459 aa10.69□□□□□ -0.7
GINS3-207ENST00000567400 STRN4Q9NRL3 753 aa10.69□□□□□ -0.7
GINS3-207ENST00000567400 ST20-MTHFSA0A0A6YYL1 179 aa10.68□□□□□ -0.7
GINS3-207ENST00000567400 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
GINS3-207ENST00000567400 A0A1W2PP64 1363 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 AATKQ6ZMQ8 1374 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 TTC21AQ8NDW8 1320 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 FAM182BQ5T319 152 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
GINS3-207ENST00000567400 SLC12A5Q9H2X9 1139 aa10.67□□□□□ -0.7
GINS3-207ENST00000567400 USP47Q96K76 1375 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 A0A0G2JS52 829 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 MYT1Q01538 1121 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 RGPD5Q99666 1765 aa10.66□□□□□ -0.7
GINS3-207ENST00000567400 TNS1Q9HBL0 1735 aaKnown RBP10.66□□□□□ -0.7
GINS3-207ENST00000567400 USP31Q70CQ4 1352 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 CLSPNQ9HAW4 1339 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 BARGINQ6ZT62 677 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 DEFB132Q7Z7B7 95 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 PUS7Q96PZ0 661 aaKnown RBP10.65□□□□□ -0.7
GINS3-207ENST00000567400 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 CRB1P82279 1406 aa10.65□□□□□ -0.7
GINS3-207ENST00000567400 EDC4Q6P2E9 1401 aaKnown RBP10.65□□□□□ -0.7
GINS3-207ENST00000567400 WNK3Q9BYP7 1800 aa10.65□□□□□ -0.71
GINS3-207ENST00000567400 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
GINS3-207ENST00000567400 NME9Q86XW9 330 aa10.64□□□□□ -0.71
GINS3-207ENST00000567400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.64□□□□□ -0.71
GINS3-207ENST00000567400 LRRC37A3O60309 1634 aa10.64□□□□□ -0.71
GINS3-207ENST00000567400 OVOS2A0A0J9YW53 1432 aa10.64□□□□□ -0.71
GINS3-207ENST00000567400 OVOS2Q6IE36 1432 aa10.64□□□□□ -0.71
GINS3-207ENST00000567400 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms