RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
CNOT1-210ENST00000567133 RGS12O14924 1447 aa15.59■□□□□ 0.09
CNOT1-210ENST00000567133 CCDC9Q9Y3X0 531 aaKnown RBP15.58■□□□□ 0.08
CNOT1-210ENST00000567133 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
CNOT1-210ENST00000567133 PLEKHG3A1L390 1219 aa15.57■□□□□ 0.08
CNOT1-210ENST00000567133 POLR3AO14802 1390 aaPredicted RBP15.57■□□□□ 0.08
CNOT1-210ENST00000567133 ATRNO75882 1429 aa15.57■□□□□ 0.08
CNOT1-210ENST00000567133 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
CNOT1-210ENST00000567133 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
CNOT1-210ENST00000567133 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
CNOT1-210ENST00000567133 ABTB2Q8N961 1025 aa15.56■□□□□ 0.08
CNOT1-210ENST00000567133 SLIT2O94813 1529 aa15.54■□□□□ 0.08
CNOT1-210ENST00000567133 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-210ENST00000567133 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-210ENST00000567133 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
CNOT1-210ENST00000567133 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
CNOT1-210ENST00000567133 CHRNA2Q15822 529 aa15.53■□□□□ 0.08
CNOT1-210ENST00000567133 GJD4Q96KN9 370 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-210ENST00000567133 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
CNOT1-210ENST00000567133 CRYBG1Q9Y4K1 1723 aa15.53■□□□□ 0.08
CNOT1-210ENST00000567133 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.08
CNOT1-210ENST00000567133 BTG4Q9NY30 223 aa15.52■□□□□ 0.08
CNOT1-210ENST00000567133 PHRF1Q9P1Y6 1649 aaKnown RBP15.52■□□□□ 0.08
CNOT1-210ENST00000567133 A0A0G2JS52 829 aa15.51■□□□□ 0.07
CNOT1-210ENST00000567133 MYT1Q01538 1121 aa15.51■□□□□ 0.07
CNOT1-210ENST00000567133 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
CNOT1-210ENST00000567133 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
CNOT1-210ENST00000567133 COL14A1Q05707 1796 aaKnown RBP15.5■□□□□ 0.07
CNOT1-210ENST00000567133 NWD2Q9ULI1 1742 aa15.5■□□□□ 0.07
CNOT1-210ENST00000567133 USP6P35125 1406 aa15.5■□□□□ 0.07
CNOT1-210ENST00000567133 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
CNOT1-210ENST00000567133 GLI3P10071 1580 aa15.49■□□□□ 0.07
CNOT1-210ENST00000567133 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
CNOT1-210ENST00000567133 UPF1Q92900 1129 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNOT1-210ENST00000567133 SOX12O15370 315 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 NLRP6P59044 892 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 VPS72Q15906 364 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 STRN4Q9NRL3 753 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
CNOT1-210ENST00000567133 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
CNOT1-210ENST00000567133 NRKQ7Z2Y5 1582 aa15.47■□□□□ 0.07
CNOT1-210ENST00000567133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
CNOT1-210ENST00000567133 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
CNOT1-210ENST00000567133 USP47Q96K76 1375 aa15.46■□□□□ 0.07
CNOT1-210ENST00000567133 SBNO2Q9Y2G9 1366 aa15.46■□□□□ 0.07
CNOT1-210ENST00000567133 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
CNOT1-210ENST00000567133 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
CNOT1-210ENST00000567133 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 GCP02774 474 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 EVA1CP58658 441 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 SEPT12Q8IYM1 358 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
CNOT1-210ENST00000567133 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
CNOT1-210ENST00000567133 USP19O94966 1318 aa15.43■□□□□ 0.06
CNOT1-210ENST00000567133 BRWD3Q6RI45 1802 aa15.43■□□□□ 0.06
CNOT1-210ENST00000567133 TESK2Q96S53 571 aa15.43■□□□□ 0.06
CNOT1-210ENST00000567133 BRD4O60885 1362 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-210ENST00000567133 HDGFL2Q7Z4V5 671 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-210ENST00000567133 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
CNOT1-210ENST00000567133 CPSF1Q10570 1443 aaKnown RBP15.42■□□□□ 0.06
CNOT1-210ENST00000567133 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
CNOT1-210ENST00000567133 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
CNOT1-210ENST00000567133 NME9Q86XW9 330 aa15.4■□□□□ 0.06
CNOT1-210ENST00000567133 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
CNOT1-210ENST00000567133 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
CNOT1-210ENST00000567133 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
CNOT1-210ENST00000567133 CAMTA1Q9Y6Y1 1673 aa15.39■□□□□ 0.05
CNOT1-210ENST00000567133 TMF1P82094 1093 aa15.39■□□□□ 0.05
CNOT1-210ENST00000567133 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
CNOT1-210ENST00000567133 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
CNOT1-210ENST00000567133 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
CNOT1-210ENST00000567133 CD163L1Q9NR16 1453 aa15.39■□□□□ 0.05
CNOT1-210ENST00000567133 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
CNOT1-210ENST00000567133 CPDO75976 1380 aa15.38■□□□□ 0.05
CNOT1-210ENST00000567133 SLIT3O75094 1523 aa15.38■□□□□ 0.05
CNOT1-210ENST00000567133 FAM182BQ5T319 152 aa15.37■□□□□ 0.05
CNOT1-210ENST00000567133 KRT27Q7Z3Y8 459 aa15.37■□□□□ 0.05
CNOT1-210ENST00000567133 POLR3GLQ9BT43 218 aa15.37■□□□□ 0.05
CNOT1-210ENST00000567133 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
CNOT1-210ENST00000567133 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
CNOT1-210ENST00000567133 EDC4Q6P2E9 1401 aaKnown RBP15.34■□□□□ 0.05
CNOT1-210ENST00000567133 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-210ENST00000567133 KCNH5Q8NCM2 988 aa15.34■□□□□ 0.05
CNOT1-210ENST00000567133 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
CNOT1-210ENST00000567133 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.05
CNOT1-210ENST00000567133 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
CNOT1-210ENST00000567133 CSB-PGBD3P0DP91 1061 aa15.33■□□□□ 0.04
CNOT1-210ENST00000567133 PUS7Q96PZ0 661 aaKnown RBP15.33■□□□□ 0.04
CNOT1-210ENST00000567133 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 TCP11L2Q8N4U5 519 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 AATKQ6ZMQ8 1374 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 NINLQ9Y2I6 1382 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 THSD7AQ9UPZ6 1657 aa15.32■□□□□ 0.04
CNOT1-210ENST00000567133 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
CNOT1-210ENST00000567133 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
CNOT1-210ENST00000567133 NFAT5O94916 1531 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms