RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PLCH1Q4KWH8 1693 aa20.53■□□□□ 0.88
COMMD4-216ENST00000567023 CENPJQ9HC77 1338 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-216ENST00000567023 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-216ENST00000567023 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
COMMD4-216ENST00000567023 NBPF8Q3BBV2 869 aa20.51■□□□□ 0.87
COMMD4-216ENST00000567023 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
COMMD4-216ENST00000567023 ACEP12821 1306 aa20.51■□□□□ 0.87
COMMD4-216ENST00000567023 CRYBG1Q9Y4K1 1723 aa20.5■□□□□ 0.87
COMMD4-216ENST00000567023 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
COMMD4-216ENST00000567023 BTG4Q9NY30 223 aa20.48■□□□□ 0.87
COMMD4-216ENST00000567023 COL14A1Q05707 1796 aaKnown RBP20.48■□□□□ 0.87
COMMD4-216ENST00000567023 SRPK2P78362 688 aaKnown RBP20.47■□□□□ 0.87
COMMD4-216ENST00000567023 SEPT12Q8IYM1 358 aa20.47■□□□□ 0.87
COMMD4-216ENST00000567023 TRPM1Q7Z4N2 1603 aa20.46■□□□□ 0.87
COMMD4-216ENST00000567023 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
COMMD4-216ENST00000567023 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
COMMD4-216ENST00000567023 CCDC9Q9Y3X0 531 aaKnown RBP20.45■□□□□ 0.86
COMMD4-216ENST00000567023 QRICH2Q9H0J4 1663 aa20.44■□□□□ 0.86
COMMD4-216ENST00000567023 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
COMMD4-216ENST00000567023 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
COMMD4-216ENST00000567023 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
COMMD4-216ENST00000567023 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
COMMD4-216ENST00000567023 BRWD3Q6RI45 1802 aa20.42■□□□□ 0.86
COMMD4-216ENST00000567023 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
COMMD4-216ENST00000567023 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
COMMD4-216ENST00000567023 KIAA0232Q92628 1395 aa20.42■□□□□ 0.86
COMMD4-216ENST00000567023 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
COMMD4-216ENST00000567023 PHRF1Q9P1Y6 1649 aaKnown RBP20.41■□□□□ 0.86
COMMD4-216ENST00000567023 SPATA31A5Q5VU36 1347 aa20.4■□□□□ 0.86
COMMD4-216ENST00000567023 KRT27Q7Z3Y8 459 aa20.4■□□□□ 0.86
COMMD4-216ENST00000567023 SPATA31A7Q8IWB4 1347 aa20.4■□□□□ 0.86
COMMD4-216ENST00000567023 BLMP54132 1417 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-216ENST00000567023 USP19O94966 1318 aa20.39■□□□□ 0.85
COMMD4-216ENST00000567023 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.85
COMMD4-216ENST00000567023 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
COMMD4-216ENST00000567023 FAM98CQ17RN3 349 aaKnown RBP20.38■□□□□ 0.85
COMMD4-216ENST00000567023 CPDO75976 1380 aa20.37■□□□□ 0.85
COMMD4-216ENST00000567023 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
COMMD4-216ENST00000567023 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
COMMD4-216ENST00000567023 CHRNA2Q15822 529 aa20.36■□□□□ 0.85
COMMD4-216ENST00000567023 USP6P35125 1406 aa20.36■□□□□ 0.85
COMMD4-216ENST00000567023 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
COMMD4-216ENST00000567023 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
COMMD4-216ENST00000567023 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
COMMD4-216ENST00000567023 GCP02774 474 aa20.34■□□□□ 0.85
COMMD4-216ENST00000567023 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
COMMD4-216ENST00000567023 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-216ENST00000567023 ZNF692Q9BU19 519 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-216ENST00000567023 A0A0G2JS52 829 aa20.32■□□□□ 0.84
COMMD4-216ENST00000567023 MYT1Q01538 1121 aa20.32■□□□□ 0.84
COMMD4-216ENST00000567023 STRN4Q9NRL3 753 aa20.31■□□□□ 0.84
COMMD4-216ENST00000567023 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
COMMD4-216ENST00000567023 THSD7AQ9UPZ6 1657 aa20.31■□□□□ 0.84
COMMD4-216ENST00000567023 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
COMMD4-216ENST00000567023 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
COMMD4-216ENST00000567023 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
COMMD4-216ENST00000567023 TONSLQ96HA7 1378 aa20.3■□□□□ 0.84
COMMD4-216ENST00000567023 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
COMMD4-216ENST00000567023 EVA1CP58658 441 aa20.29■□□□□ 0.84
COMMD4-216ENST00000567023 NLRP6P59044 892 aa20.29■□□□□ 0.84
COMMD4-216ENST00000567023 BARGINQ6ZT62 677 aa20.28■□□□□ 0.84
COMMD4-216ENST00000567023 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
COMMD4-216ENST00000567023 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.84
COMMD4-216ENST00000567023 SLIT3O75094 1523 aa20.27■□□□□ 0.84
COMMD4-216ENST00000567023 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
COMMD4-216ENST00000567023 TTC21BQ7Z4L5 1316 aa20.26■□□□□ 0.83
COMMD4-216ENST00000567023 THRAP3Q9Y2W1 955 aaKnown RBP20.25■□□□□ 0.83
COMMD4-216ENST00000567023 PIK3C2AO00443 1686 aa20.25■□□□□ 0.83
COMMD4-216ENST00000567023 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
COMMD4-216ENST00000567023 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
COMMD4-216ENST00000567023 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-216ENST00000567023 AKAP12Q02952 1782 aa20.23■□□□□ 0.83
COMMD4-216ENST00000567023 TCP11L2Q8N4U5 519 aa20.23■□□□□ 0.83
COMMD4-216ENST00000567023 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
COMMD4-216ENST00000567023 BAG6P46379 1132 aa20.22■□□□□ 0.83
COMMD4-216ENST00000567023 FAM182BQ5T319 152 aa20.22■□□□□ 0.83
COMMD4-216ENST00000567023 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
COMMD4-216ENST00000567023 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
COMMD4-216ENST00000567023 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
COMMD4-216ENST00000567023 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
COMMD4-216ENST00000567023 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
COMMD4-216ENST00000567023 DISP2A7MBM2 1401 aa20.19■□□□□ 0.82
COMMD4-216ENST00000567023 CRB1P82279 1406 aa20.19■□□□□ 0.82
COMMD4-216ENST00000567023 COL18A1P39060 1754 aa20.18■□□□□ 0.82
COMMD4-216ENST00000567023 RGPD1P0DJD0 1748 aa20.18■□□□□ 0.82
COMMD4-216ENST00000567023 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
COMMD4-216ENST00000567023 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
COMMD4-216ENST00000567023 PDE3BQ13370 1112 aa20.17■□□□□ 0.82
COMMD4-216ENST00000567023 AXIN2Q9Y2T1 843 aa20.17■□□□□ 0.82
COMMD4-216ENST00000567023 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
COMMD4-216ENST00000567023 TESK2Q96S53 571 aa20.16■□□□□ 0.82
COMMD4-216ENST00000567023 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
COMMD4-216ENST00000567023 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
COMMD4-216ENST00000567023 WDR17Q8IZU2 1322 aa20.14■□□□□ 0.81
COMMD4-216ENST00000567023 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
COMMD4-216ENST00000567023 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-216ENST00000567023 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
COMMD4-216ENST00000567023 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
COMMD4-216ENST00000567023 NFAT5O94916 1531 aa20.13■□□□□ 0.81
COMMD4-216ENST00000567023 ST20-MTHFSA0A0A6YYL1 179 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms