RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RABEP1Q15276 862 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 ERC2O15083 957 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 CCP110O43303 1012 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 ANKRD20A12PQ8NF67 263 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 CERKQ8TCT0 537 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 BACH2Q9BYV9 841 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 APBB1O00213 710 aa5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 CAVIN1Q6NZI2 390 aaKnown RBP5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.28□□□□□ -1.56
LPCAT2-208ENST00000566915 PDCP20941 246 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 YEATS2Q9ULM3 1422 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 WDR63Q8IWG1 891 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 FBXO41Q8TF61 875 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 NOC3LQ8WTT2 800 aaKnown RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 NAT10Q9H0A0 1025 aaKnown RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 AMPHP49418 695 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 A0A0U1RQG5 324 aaPredicted RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 IPO7O95373 1038 aaKnown RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 DDX58O95786 925 aaKnown RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 NASPP49321 788 aaPredicted RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 NEXNQ0ZGT2 675 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 SLC4A10Q6U841 1118 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 CCDC47Q96A33 483 aaKnown RBP5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 NGLY1Q96IV0 654 aa5.27□□□□□ -1.57
LPCAT2-208ENST00000566915 HIP1O00291 1037 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 SAFB2Q14151 953 aaKnown RBP eCLIP5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 NOM1Q5C9Z4 860 aaKnown RBP5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 NCKAP5LQ9HCH0 1330 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 ARHGEF40Q8TER5 1519 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 NPHP1O15259 732 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 PSMA5P28066 241 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 SYNE3Q6ZMZ3 975 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 VSIG10Q8N0Z9 540 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 RPRD2Q5VT52 1461 aaKnown RBP5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 CCDC66A2RUB6 948 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 PLIN1O60240 522 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 TRAK2O60296 914 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 CDR1P51861 262 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 TAF7LQ5H9L4 462 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 SASS6Q6UVJ0 657 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 PNISRQ8TF01 805 aaKnown RBP5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 SMC3Q9UQE7 1217 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 PLEKHG5O94827 1062 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 GNAI3P08754 354 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 RIPK4P57078 832 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 TRAK1Q9UPV9 953 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 KDM5DQ9BY66 1539 aa5.26□□□□□ -1.57
LPCAT2-208ENST00000566915 TRIM29Q14134 588 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 ERCC4Q92889 916 aaPredicted RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 RILPL2Q969X0 211 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 KCNA6P17658 529 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 CCDC73Q6ZRK6 1079 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 CWC15Q9P013 229 aaKnown RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 PTPRMP28827 1452 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 ABCC1P33527 1531 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 ARHGEF5Q12774 1597 aa5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 AKAP17AQ02040 695 aaKnown RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 NPHP4O75161 1426 aaPredicted RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 RRP9O43818 475 aaKnown RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 TPD52L1Q16890 204 aaPredicted RBP5.25□□□□□ -1.57
LPCAT2-208ENST00000566915 AGLP35573 1532 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 NUTM2DQ5VT03 806 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 ZNF771Q7L3S4 317 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 PDCL2Q8N4E4 241 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 IFIT2P09913 472 aaKnown RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 ESCO1Q5FWF5 840 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 ANO8Q9HCE9 1232 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 PREX2Q70Z35 1606 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 ABCC5O15440 1437 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 NUTM2BA6NNL0 878 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 NUTM2EB1AL46 878 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 C11orf95C9JLR9 678 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 PPP2R1AP30153 589 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 TEFQ10587 303 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 AEBP1Q8IUX7 1158 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 NUTM2AQ8IVF1 878 aaPredicted RBP5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 SRCIN1Q9C0H9 1055 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 RIMS2Q9UQ26 1411 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 SLC4A3P48751 1232 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 C1orf141Q5JVX7 400 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 TBX22Q9Y458 520 aa5.24□□□□□ -1.57
LPCAT2-208ENST00000566915 PIP4K2AP48426 406 aaPredicted RBP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 BICD2Q8TD16 824 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 LRRC59Q96AG4 307 aaKnown RBP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 C19orf44Q9H6X5 657 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 FOXD4L1Q9NU39 408 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 RRP7AQ9Y3A4 280 aaKnown RBP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 MAP3K4Q9Y6R4 1608 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 A2ML1A8K2U0 1454 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 TRDNQ13061 729 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 G3BP1Q13283 466 aaKnown RBP eCLIP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 TAF3Q5VWG9 929 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 FBXO31Q5XUX0 539 aaPredicted RBP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 ZNF772Q68DY9 489 aaPredicted RBP5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 ERC1Q8IUD2 1116 aa5.23□□□□□ -1.57
LPCAT2-208ENST00000566915 SLC26A8Q96RN1 970 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms