RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
CCNDBP1-210ENST00000566882 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
CCNDBP1-210ENST00000566882 E9PSI1 815 aa13.3□□□□□ -0.28
CCNDBP1-210ENST00000566882 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
CCNDBP1-210ENST00000566882 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
CCNDBP1-210ENST00000566882 CPS1P31327 1500 aa13.29□□□□□ -0.28
CCNDBP1-210ENST00000566882 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
CCNDBP1-210ENST00000566882 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
CCNDBP1-210ENST00000566882 TECPR2O15040 1411 aa13.29□□□□□ -0.28
CCNDBP1-210ENST00000566882 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 ATP7BP35670 1465 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
CCNDBP1-210ENST00000566882 MED14O60244 1454 aa13.27□□□□□ -0.28
CCNDBP1-210ENST00000566882 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
CCNDBP1-210ENST00000566882 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
CCNDBP1-210ENST00000566882 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
CCNDBP1-210ENST00000566882 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
CCNDBP1-210ENST00000566882 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
CCNDBP1-210ENST00000566882 HMOX1P09601 288 aa13.24□□□□□ -0.29
CCNDBP1-210ENST00000566882 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
CCNDBP1-210ENST00000566882 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
CCNDBP1-210ENST00000566882 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
CCNDBP1-210ENST00000566882 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 FANCIQ9NVI1 1328 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 SLIT1O75093 1534 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 ACEP12821 1306 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
CCNDBP1-210ENST00000566882 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
CCNDBP1-210ENST00000566882 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
CCNDBP1-210ENST00000566882 ITSN1Q15811 1721 aa13.21□□□□□ -0.29
CCNDBP1-210ENST00000566882 RARSP54136 660 aaKnown RBP13.21□□□□□ -0.29
CCNDBP1-210ENST00000566882 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.3
CCNDBP1-210ENST00000566882 SOX12O15370 315 aa13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 RIPK4P57078 832 aa13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 RIMS1Q86UR5 1692 aaKnown RBP13.2□□□□□ -0.3
CCNDBP1-210ENST00000566882 COG3Q96JB2 828 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 COG6Q9Y2V7 657 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 RLBP1P12271 317 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 KCNA6P17658 529 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 IL13P35225 146 aa13.19□□□□□ -0.3
CCNDBP1-210ENST00000566882 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
CCNDBP1-210ENST00000566882 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
CCNDBP1-210ENST00000566882 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
CCNDBP1-210ENST00000566882 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
CCNDBP1-210ENST00000566882 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
CCNDBP1-210ENST00000566882 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
CCNDBP1-210ENST00000566882 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
CCNDBP1-210ENST00000566882 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
CCNDBP1-210ENST00000566882 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
CCNDBP1-210ENST00000566882 FCHSD2O94868 740 aa13.16□□□□□ -0.3
CCNDBP1-210ENST00000566882 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CCNDBP1-210ENST00000566882 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
CCNDBP1-210ENST00000566882 IGHDP01880 384 aa13.15□□□□□ -0.3
CCNDBP1-210ENST00000566882 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
CCNDBP1-210ENST00000566882 USP6P35125 1406 aa13.15□□□□□ -0.31
CCNDBP1-210ENST00000566882 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
CCNDBP1-210ENST00000566882 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
CCNDBP1-210ENST00000566882 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
CCNDBP1-210ENST00000566882 AATKQ6ZMQ8 1374 aa13.14□□□□□ -0.31
CCNDBP1-210ENST00000566882 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
CCNDBP1-210ENST00000566882 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
CCNDBP1-210ENST00000566882 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
CCNDBP1-210ENST00000566882 NUTM2GQ5VZR2 741 aa13.13□□□□□ -0.31
CCNDBP1-210ENST00000566882 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
CCNDBP1-210ENST00000566882 PEAK1Q9H792 1746 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 PDE3AQ14432 1141 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
CCNDBP1-210ENST00000566882 PDE4AP27815 886 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms