RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 ATP7BP35670 1465 aa14.52□□□□□ -0.08
GTF3C1-206ENST00000566779 SPATA31A3Q5VYP0 1347 aa14.52□□□□□ -0.08
GTF3C1-206ENST00000566779 GPRASP1Q5JY77 1395 aa14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 USP21Q9UK80 565 aa14.51□□□□□ -0.09
GTF3C1-206ENST00000566779 ROCK2O75116 1388 aaKnown RBP14.5□□□□□ -0.09
GTF3C1-206ENST00000566779 QTRT2Q9H974 415 aaKnown RBP14.5□□□□□ -0.09
GTF3C1-206ENST00000566779 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
GTF3C1-206ENST00000566779 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
GTF3C1-206ENST00000566779 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
GTF3C1-206ENST00000566779 RGS12O14924 1447 aa14.49□□□□□ -0.09
GTF3C1-206ENST00000566779 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
GTF3C1-206ENST00000566779 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
GTF3C1-206ENST00000566779 NUDT16Q96DE0 195 aaKnown RBP14.48□□□□□ -0.09
GTF3C1-206ENST00000566779 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
GTF3C1-206ENST00000566779 SBNO1A3KN83 1393 aa14.47□□□□□ -0.09
GTF3C1-206ENST00000566779 CRYBG1Q9Y4K1 1723 aa14.47□□□□□ -0.09
GTF3C1-206ENST00000566779 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
GTF3C1-206ENST00000566779 PHRF1Q9P1Y6 1649 aaKnown RBP14.47□□□□□ -0.09
GTF3C1-206ENST00000566779 NWD2Q9ULI1 1742 aa14.46□□□□□ -0.09
GTF3C1-206ENST00000566779 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-206ENST00000566779 TRPC5Q9UL62 973 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-206ENST00000566779 POLA2Q14181 598 aa14.45□□□□□ -0.1
GTF3C1-206ENST00000566779 CDK12Q9NYV4 1490 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 ATRNO75882 1429 aa14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 PPIP5K1Q6PFW1 1433 aa14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 BRWD3Q6RI45 1802 aa14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-206ENST00000566779 COL14A1Q05707 1796 aaKnown RBP14.43□□□□□ -0.1
GTF3C1-206ENST00000566779 PROM2Q8N271 834 aa14.43□□□□□ -0.1
GTF3C1-206ENST00000566779 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
GTF3C1-206ENST00000566779 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
GTF3C1-206ENST00000566779 CAPN15O75808 1086 aa14.42□□□□□ -0.1
GTF3C1-206ENST00000566779 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
GTF3C1-206ENST00000566779 GLI3P10071 1580 aa14.42□□□□□ -0.1
GTF3C1-206ENST00000566779 ACEP12821 1306 aa14.41□□□□□ -0.1
GTF3C1-206ENST00000566779 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-206ENST00000566779 SLIT2O94813 1529 aa14.41□□□□□ -0.1
GTF3C1-206ENST00000566779 AKAP12Q02952 1782 aa14.4□□□□□ -0.1
GTF3C1-206ENST00000566779 A0A0G2JS52 829 aa14.4□□□□□ -0.1
GTF3C1-206ENST00000566779 MYT1Q01538 1121 aa14.4□□□□□ -0.1
GTF3C1-206ENST00000566779 RALGAPBQ86X10 1494 aa14.39□□□□□ -0.11
GTF3C1-206ENST00000566779 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
GTF3C1-206ENST00000566779 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
GTF3C1-206ENST00000566779 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
GTF3C1-206ENST00000566779 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
GTF3C1-206ENST00000566779 UNC5CLQ8IV45 518 aa14.38□□□□□ -0.11
GTF3C1-206ENST00000566779 NRKQ7Z2Y5 1582 aa14.38□□□□□ -0.11
GTF3C1-206ENST00000566779 ZBTB7CA1YPR0 619 aa14.37□□□□□ -0.11
GTF3C1-206ENST00000566779 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
GTF3C1-206ENST00000566779 POLR3AO14802 1390 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-206ENST00000566779 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-206ENST00000566779 UPF1Q92900 1129 aaKnown RBP eCLIP14.36□□□□□ -0.11
GTF3C1-206ENST00000566779 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-206ENST00000566779 ATAD2Q6PL18 1390 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 CHRNA2Q15822 529 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 BTG4Q9NY30 223 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 PIK3C2AO00443 1686 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
GTF3C1-206ENST00000566779 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
GTF3C1-206ENST00000566779 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-206ENST00000566779 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.12
GTF3C1-206ENST00000566779 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
GTF3C1-206ENST00000566779 USP6P35125 1406 aa14.32□□□□□ -0.12
GTF3C1-206ENST00000566779 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
GTF3C1-206ENST00000566779 SOX12O15370 315 aa14.31□□□□□ -0.12
GTF3C1-206ENST00000566779 VPS72Q15906 364 aa14.31□□□□□ -0.12
GTF3C1-206ENST00000566779 SEPT12Q8IYM1 358 aa14.3□□□□□ -0.12
GTF3C1-206ENST00000566779 TMC1Q8TDI8 760 aa14.3□□□□□ -0.12
GTF3C1-206ENST00000566779 FAM98CQ17RN3 349 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-206ENST00000566779 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-206ENST00000566779 NLRP6P59044 892 aa14.28□□□□□ -0.12
GTF3C1-206ENST00000566779 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-206ENST00000566779 NLRP13Q86W25 1043 aa14.28□□□□□ -0.12
GTF3C1-206ENST00000566779 USP35Q9P2H5 1018 aa14.28□□□□□ -0.12
GTF3C1-206ENST00000566779 LTN1O94822 1766 aa14.27□□□□□ -0.12
GTF3C1-206ENST00000566779 LMO7Q8WWI1 1683 aa14.27□□□□□ -0.12
GTF3C1-206ENST00000566779 USP19O94966 1318 aa14.26□□□□□ -0.13
GTF3C1-206ENST00000566779 EVA1CP58658 441 aa14.26□□□□□ -0.13
GTF3C1-206ENST00000566779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
GTF3C1-206ENST00000566779 SBNO2Q9Y2G9 1366 aa14.25□□□□□ -0.13
GTF3C1-206ENST00000566779 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
GTF3C1-206ENST00000566779 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
GTF3C1-206ENST00000566779 SLIT3O75094 1523 aa14.25□□□□□ -0.13
GTF3C1-206ENST00000566779 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
GTF3C1-206ENST00000566779 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 SPATA31A5Q5VU36 1347 aa14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 SPATA31A7Q8IWB4 1347 aa14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 CCER1Q8TC90 406 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
GTF3C1-206ENST00000566779 BRD4O60885 1362 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms