RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 TRPM1Q7Z4N2 1603 aa21.98■■□□□ 1.11
SMPD3-208ENST00000566723 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
SMPD3-208ENST00000566723 FAM83GA6ND36 823 aa21.96■■□□□ 1.11
SMPD3-208ENST00000566723 PAK3O75914 559 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-208ENST00000566723 POLR3AO14802 1390 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-208ENST00000566723 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
SMPD3-208ENST00000566723 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
SMPD3-208ENST00000566723 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
SMPD3-208ENST00000566723 CCDC61Q9Y6R9 512 aa21.92■■□□□ 1.1
SMPD3-208ENST00000566723 ACEP12821 1306 aa21.91■■□□□ 1.1
SMPD3-208ENST00000566723 SEPT12Q8IYM1 358 aa21.9■■□□□ 1.1
SMPD3-208ENST00000566723 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
SMPD3-208ENST00000566723 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.09
SMPD3-208ENST00000566723 CCDC125Q86Z20 511 aa21.89■■□□□ 1.09
SMPD3-208ENST00000566723 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.09
SMPD3-208ENST00000566723 NRKQ7Z2Y5 1582 aa21.89■■□□□ 1.09
SMPD3-208ENST00000566723 ONECUT3O60422 494 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-208ENST00000566723 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
SMPD3-208ENST00000566723 NBPF8Q3BBV2 869 aa21.87■■□□□ 1.09
SMPD3-208ENST00000566723 PRDM11Q9NQV5 511 aa21.87■■□□□ 1.09
SMPD3-208ENST00000566723 BLMP54132 1417 aaPredicted RBP21.87■■□□□ 1.09
SMPD3-208ENST00000566723 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
SMPD3-208ENST00000566723 KIAA0232Q92628 1395 aa21.86■■□□□ 1.09
SMPD3-208ENST00000566723 THSD7AQ9UPZ6 1657 aa21.85■■□□□ 1.09
SMPD3-208ENST00000566723 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
SMPD3-208ENST00000566723 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
SMPD3-208ENST00000566723 ROCK2O75116 1388 aaKnown RBP21.83■■□□□ 1.08
SMPD3-208ENST00000566723 SPATA31A5Q5VU36 1347 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 SPATA31A7Q8IWB4 1347 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 A0A0G2JS52 829 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 MYT1Q01538 1121 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 FAM98CQ17RN3 349 aaKnown RBP21.82■■□□□ 1.08
SMPD3-208ENST00000566723 NUTM2GQ5VZR2 741 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
SMPD3-208ENST00000566723 BRD4O60885 1362 aaPredicted RBP21.81■■□□□ 1.08
SMPD3-208ENST00000566723 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
SMPD3-208ENST00000566723 USP19O94966 1318 aa21.8■■□□□ 1.08
SMPD3-208ENST00000566723 ABTB2Q8N961 1025 aa21.8■■□□□ 1.08
SMPD3-208ENST00000566723 SRCAPQ6ZRS2 3230 aa21.8■■□□□ 1.08
SMPD3-208ENST00000566723 CHRNA2Q15822 529 aa21.79■■□□□ 1.08
SMPD3-208ENST00000566723 USP6P35125 1406 aa21.79■■□□□ 1.08
SMPD3-208ENST00000566723 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
SMPD3-208ENST00000566723 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
SMPD3-208ENST00000566723 EVC2Q86UK5 1308 aa21.78■■□□□ 1.08
SMPD3-208ENST00000566723 RGPD1P0DJD0 1748 aa21.77■■□□□ 1.08
SMPD3-208ENST00000566723 CPDO75976 1380 aa21.77■■□□□ 1.08
SMPD3-208ENST00000566723 PIK3C2AO00443 1686 aa21.77■■□□□ 1.08
SMPD3-208ENST00000566723 ZRANB1Q9UGI0 708 aa21.76■■□□□ 1.07
SMPD3-208ENST00000566723 SSH2Q76I76 1423 aa21.75■■□□□ 1.07
SMPD3-208ENST00000566723 SF3B2Q13435 895 aaKnown RBP21.75■■□□□ 1.07
SMPD3-208ENST00000566723 CABP1Q9NZU7 370 aa21.75■■□□□ 1.07
SMPD3-208ENST00000566723 CAMTA1Q9Y6Y1 1673 aa21.75■■□□□ 1.07
SMPD3-208ENST00000566723 SPATA31A1Q5TZJ5 1347 aa21.75■■□□□ 1.07
SMPD3-208ENST00000566723 NLRP13Q86W25 1043 aa21.74■■□□□ 1.07
SMPD3-208ENST00000566723 STRN4Q9NRL3 753 aa21.74■■□□□ 1.07
SMPD3-208ENST00000566723 SLIT3O75094 1523 aa21.74■■□□□ 1.07
SMPD3-208ENST00000566723 TNS1Q9HBL0 1735 aaKnown RBP21.72■■□□□ 1.07
SMPD3-208ENST00000566723 DEFB132Q7Z7B7 95 aa21.72■■□□□ 1.07
SMPD3-208ENST00000566723 GCP02774 474 aa21.71■■□□□ 1.07
SMPD3-208ENST00000566723 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
SMPD3-208ENST00000566723 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
SMPD3-208ENST00000566723 COL5A2P05997 1499 aaPredicted RBP21.69■■□□□ 1.06
SMPD3-208ENST00000566723 EVA1CP58658 441 aa21.68■■□□□ 1.06
SMPD3-208ENST00000566723 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
SMPD3-208ENST00000566723 COL18A1P39060 1754 aa21.67■■□□□ 1.06
SMPD3-208ENST00000566723 PARP4Q9UKK3 1724 aaKnown RBP21.67■■□□□ 1.06
SMPD3-208ENST00000566723 NLRP6P59044 892 aa21.67■■□□□ 1.06
SMPD3-208ENST00000566723 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
SMPD3-208ENST00000566723 USP35Q9P2H5 1018 aa21.66■■□□□ 1.06
SMPD3-208ENST00000566723 CPSF1Q10570 1443 aaKnown RBP21.65■■□□□ 1.06
SMPD3-208ENST00000566723 BAG6P46379 1132 aa21.65■■□□□ 1.06
SMPD3-208ENST00000566723 LARP1Q6PKG0 1096 aaKnown RBP21.65■■□□□ 1.06
SMPD3-208ENST00000566723 BARGINQ6ZT62 677 aa21.65■■□□□ 1.06
SMPD3-208ENST00000566723 CARD11Q9BXL7 1154 aa21.65■■□□□ 1.06
SMPD3-208ENST00000566723 WNK3Q9BYP7 1800 aa21.64■■□□□ 1.06
SMPD3-208ENST00000566723 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
SMPD3-208ENST00000566723 RGPD5Q99666 1765 aa21.64■■□□□ 1.05
SMPD3-208ENST00000566723 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
SMPD3-208ENST00000566723 AATKQ6ZMQ8 1374 aa21.63■■□□□ 1.05
SMPD3-208ENST00000566723 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
SMPD3-208ENST00000566723 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
SMPD3-208ENST00000566723 USP54Q70EL1 1684 aa21.63■■□□□ 1.05
SMPD3-208ENST00000566723 CRB1P82279 1406 aa21.62■■□□□ 1.05
SMPD3-208ENST00000566723 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
SMPD3-208ENST00000566723 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
SMPD3-208ENST00000566723 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
SMPD3-208ENST00000566723 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
SMPD3-208ENST00000566723 NFAT5O94916 1531 aa21.6■■□□□ 1.05
SMPD3-208ENST00000566723 LRRC37A3O60309 1634 aa21.59■■□□□ 1.05
SMPD3-208ENST00000566723 FAM196AQ6ZSG2 479 aa21.59■■□□□ 1.05
SMPD3-208ENST00000566723 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
SMPD3-208ENST00000566723 CD163L1Q9NR16 1453 aa21.58■■□□□ 1.04
SMPD3-208ENST00000566723 ABCC6O95255 1503 aa21.57■■□□□ 1.04
SMPD3-208ENST00000566723 PDE3BQ13370 1112 aa21.57■■□□□ 1.04
SMPD3-208ENST00000566723 LRP5O75197 1615 aa21.57■■□□□ 1.04
SMPD3-208ENST00000566723 EN1Q05925 392 aaPredicted RBP21.56■■□□□ 1.04
SMPD3-208ENST00000566723 KCNH5Q8NCM2 988 aa21.56■■□□□ 1.04
SMPD3-208ENST00000566723 RREB1Q92766 1687 aa21.56■■□□□ 1.04
SMPD3-208ENST00000566723 LTN1O94822 1766 aa21.55■■□□□ 1.04
SMPD3-208ENST00000566723 SBF2Q86WG5 1849 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms