RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 ITSN1Q15811 1721 aa21.24■□□□□ 0.99
VAC14-208ENST00000566655 KIF20BQ96Q89 1820 aa21.23■□□□□ 0.99
VAC14-208ENST00000566655 ADAMTS8Q9UP79 889 aa21.23■□□□□ 0.99
VAC14-208ENST00000566655 PHF8Q9UPP1 1060 aa21.23■□□□□ 0.99
VAC14-208ENST00000566655 NGDNQ8NEJ9 315 aaKnown RBP21.22■□□□□ 0.99
VAC14-208ENST00000566655 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
VAC14-208ENST00000566655 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
VAC14-208ENST00000566655 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
VAC14-208ENST00000566655 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.98
VAC14-208ENST00000566655 RGPD8O14715 1765 aaPredicted RBP21.2■□□□□ 0.98
VAC14-208ENST00000566655 TTC21AQ8NDW8 1320 aa21.2■□□□□ 0.98
VAC14-208ENST00000566655 DCCP43146 1447 aa21.2■□□□□ 0.98
VAC14-208ENST00000566655 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
VAC14-208ENST00000566655 PNPLA6Q8IY17 1366 aa21.19■□□□□ 0.98
VAC14-208ENST00000566655 COL3A1P02461 1466 aaPredicted RBP21.19■□□□□ 0.98
VAC14-208ENST00000566655 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
VAC14-208ENST00000566655 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
VAC14-208ENST00000566655 ZNF335Q9H4Z2 1342 aaPredicted RBP21.18■□□□□ 0.98
VAC14-208ENST00000566655 LRRC7Q96NW7 1537 aa21.18■□□□□ 0.98
VAC14-208ENST00000566655 POLKQ9UBT6 870 aa21.18■□□□□ 0.98
VAC14-208ENST00000566655 SMG6Q86US8 1419 aaKnown RBP21.17■□□□□ 0.98
VAC14-208ENST00000566655 FBLN1P23142 703 aa21.17■□□□□ 0.98
VAC14-208ENST00000566655 COG3Q96JB2 828 aa21.17■□□□□ 0.98
VAC14-208ENST00000566655 MST1RQ04912 1400 aa21.16■□□□□ 0.98
VAC14-208ENST00000566655 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.98
VAC14-208ENST00000566655 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
VAC14-208ENST00000566655 ORAI2Q96SN7 254 aa21.16■□□□□ 0.98
VAC14-208ENST00000566655 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
VAC14-208ENST00000566655 CFAP53Q96M91 514 aa21.13■□□□□ 0.97
VAC14-208ENST00000566655 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
VAC14-208ENST00000566655 ATF3P18847 181 aa21.1■□□□□ 0.97
VAC14-208ENST00000566655 PIK3C2AO00443 1686 aa21.1■□□□□ 0.97
VAC14-208ENST00000566655 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
VAC14-208ENST00000566655 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
VAC14-208ENST00000566655 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
VAC14-208ENST00000566655 MSH6P52701 1360 aa21.09■□□□□ 0.97
VAC14-208ENST00000566655 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
VAC14-208ENST00000566655 USP54Q70EL1 1684 aa21.08■□□□□ 0.96
VAC14-208ENST00000566655 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
VAC14-208ENST00000566655 RRS1Q15050 365 aaKnown RBP21.07■□□□□ 0.96
VAC14-208ENST00000566655 FOXO3O43524 673 aa21.06■□□□□ 0.96
VAC14-208ENST00000566655 PSME1Q06323 249 aa21.05■□□□□ 0.96
VAC14-208ENST00000566655 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
VAC14-208ENST00000566655 KIF1AQ12756 1690 aa21.04■□□□□ 0.96
VAC14-208ENST00000566655 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
VAC14-208ENST00000566655 NLRP6P59044 892 aa21.04■□□□□ 0.96
VAC14-208ENST00000566655 MARF1Q9Y4F3 1742 aaKnown RBP21.03■□□□□ 0.96
VAC14-208ENST00000566655 IL13P35225 146 aa21.03■□□□□ 0.96
VAC14-208ENST00000566655 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
VAC14-208ENST00000566655 ZNF521Q96K83 1311 aa21.02■□□□□ 0.96
VAC14-208ENST00000566655 PAK3O75914 559 aaPredicted RBP21.01■□□□□ 0.95
VAC14-208ENST00000566655 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
VAC14-208ENST00000566655 MAP3K19Q56UN5 1328 aa21■□□□□ 0.95
VAC14-208ENST00000566655 APAF1O14727 1248 aa21■□□□□ 0.95
VAC14-208ENST00000566655 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
VAC14-208ENST00000566655 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
VAC14-208ENST00000566655 NUTM2GQ5VZR2 741 aa21■□□□□ 0.95
VAC14-208ENST00000566655 PLEKHF1Q96S99 279 aa21■□□□□ 0.95
VAC14-208ENST00000566655 NUDCQ9Y266 331 aa21■□□□□ 0.95
VAC14-208ENST00000566655 IQSEC2Q5JU85 1478 aa21■□□□□ 0.95
VAC14-208ENST00000566655 TRPM3Q9HCF6 1732 aaPredicted RBP21■□□□□ 0.95
VAC14-208ENST00000566655 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
VAC14-208ENST00000566655 XPCQ01831 940 aaPredicted RBP20.99■□□□□ 0.95
VAC14-208ENST00000566655 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
VAC14-208ENST00000566655 PEAK1Q9H792 1746 aa20.99■□□□□ 0.95
VAC14-208ENST00000566655 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
VAC14-208ENST00000566655 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
VAC14-208ENST00000566655 BRINP3Q76B58 766 aa20.97■□□□□ 0.95
VAC14-208ENST00000566655 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
VAC14-208ENST00000566655 U2SURPO15042 1029 aaKnown RBP20.97■□□□□ 0.95
VAC14-208ENST00000566655 DDX17Q92841 729 aaKnown RBP20.97■□□□□ 0.95
VAC14-208ENST00000566655 MAP2P11137 1827 aaKnown RBP20.96■□□□□ 0.95
VAC14-208ENST00000566655 SBNO1A3KN83 1393 aa20.96■□□□□ 0.95
VAC14-208ENST00000566655 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
VAC14-208ENST00000566655 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
VAC14-208ENST00000566655 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
VAC14-208ENST00000566655 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
VAC14-208ENST00000566655 NFAT5O94916 1531 aa20.96■□□□□ 0.95
VAC14-208ENST00000566655 PXDNQ92626 1479 aa20.95■□□□□ 0.94
VAC14-208ENST00000566655 USP19O94966 1318 aa20.95■□□□□ 0.94
VAC14-208ENST00000566655 SLIT3O75094 1523 aa20.95■□□□□ 0.94
VAC14-208ENST00000566655 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
VAC14-208ENST00000566655 HSP90AB2PQ58FF8 381 aa20.95■□□□□ 0.94
VAC14-208ENST00000566655 KIF24Q5T7B8 1368 aa20.95■□□□□ 0.94
VAC14-208ENST00000566655 SOX12O15370 315 aa20.94■□□□□ 0.94
VAC14-208ENST00000566655 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
VAC14-208ENST00000566655 RSPH6AQ9H0K4 717 aa20.94■□□□□ 0.94
VAC14-208ENST00000566655 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
VAC14-208ENST00000566655 FCHSD2O94868 740 aa20.93■□□□□ 0.94
VAC14-208ENST00000566655 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
VAC14-208ENST00000566655 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
VAC14-208ENST00000566655 FLT4P35916 1363 aa20.93■□□□□ 0.94
VAC14-208ENST00000566655 ALS2Q96Q42 1657 aa20.91■□□□□ 0.94
VAC14-208ENST00000566655 HOXC9P31274 260 aa20.9■□□□□ 0.94
VAC14-208ENST00000566655 KCNH5Q8NCM2 988 aa20.9■□□□□ 0.94
VAC14-208ENST00000566655 CCDC27Q2M243 656 aa20.89■□□□□ 0.93
VAC14-208ENST00000566655 SPATA31A3Q5VYP0 1347 aa20.89■□□□□ 0.93
VAC14-208ENST00000566655 RTL1A6NKG5 1358 aa20.89■□□□□ 0.93
VAC14-208ENST00000566655 GCP02774 474 aa20.88■□□□□ 0.93
VAC14-208ENST00000566655 TRMT2AQ8IZ69 625 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms