RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 MAP10Q9P2G4 905 aa14□□□□□ -0.17
CCP110-208ENST00000566523 J3QL48 77 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 SIAH2O43255 324 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 LINC01559Q495D7 138 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 CRIPAKQ8N1N5 446 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 PROCA1Q8NCQ7 364 aaPredicted RBP13.99□□□□□ -0.17
CCP110-208ENST00000566523 TSC1Q92574 1164 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 AAASQ9NRG9 546 aa13.99□□□□□ -0.17
CCP110-208ENST00000566523 ST8SIA5O15466 376 aa13.98□□□□□ -0.17
CCP110-208ENST00000566523 FBXO31Q5XUX0 539 aaPredicted RBP13.98□□□□□ -0.17
CCP110-208ENST00000566523 ZNF511Q8NB15 262 aa13.98□□□□□ -0.17
CCP110-208ENST00000566523 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCP110-208ENST00000566523 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
CCP110-208ENST00000566523 HELBQ8NG08 1087 aaPredicted RBP13.96□□□□□ -0.17
CCP110-208ENST00000566523 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
CCP110-208ENST00000566523 SMCPP49901 116 aaPredicted RBP13.94□□□□□ -0.18
CCP110-208ENST00000566523 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
CCP110-208ENST00000566523 PPP2R2DQ66LE6 453 aa13.94□□□□□ -0.18
CCP110-208ENST00000566523 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
CCP110-208ENST00000566523 ZNF787Q6DD87 383 aa13.93□□□□□ -0.18
CCP110-208ENST00000566523 BRPF1P55201 1214 aaPredicted RBP13.91□□□□□ -0.18
CCP110-208ENST00000566523 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
CCP110-208ENST00000566523 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
CCP110-208ENST00000566523 VARSP26640 1264 aaKnown RBP13.9□□□□□ -0.18
CCP110-208ENST00000566523 HPS1Q92902 700 aa13.9□□□□□ -0.18
CCP110-208ENST00000566523 AXIN1O15169 862 aa13.89□□□□□ -0.19
CCP110-208ENST00000566523 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
CCP110-208ENST00000566523 POTECB2RU33 542 aa13.88□□□□□ -0.19
CCP110-208ENST00000566523 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
CCP110-208ENST00000566523 FOXJ1Q92949 421 aa13.87□□□□□ -0.19
CCP110-208ENST00000566523 MPNDQ8N594 471 aa13.86□□□□□ -0.19
CCP110-208ENST00000566523 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
CCP110-208ENST00000566523 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
CCP110-208ENST00000566523 TLL2Q9Y6L7 1015 aa13.85□□□□□ -0.19
CCP110-208ENST00000566523 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
CCP110-208ENST00000566523 LRRN4Q8WUT4 740 aa13.84□□□□□ -0.19
CCP110-208ENST00000566523 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
CCP110-208ENST00000566523 FAM174AQ8TBP5 190 aa13.81□□□□□ -0.2
CCP110-208ENST00000566523 WASF2Q9Y6W5 498 aa13.81□□□□□ -0.2
CCP110-208ENST00000566523 AP1G2O75843 785 aa13.79□□□□□ -0.2
CCP110-208ENST00000566523 RFC5P40937 340 aa13.79□□□□□ -0.2
CCP110-208ENST00000566523 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
CCP110-208ENST00000566523 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
CCP110-208ENST00000566523 BPHLQ86WA6 291 aaPredicted RBP13.79□□□□□ -0.2
CCP110-208ENST00000566523 PCMTD1Q96MG8 357 aaPredicted RBP13.79□□□□□ -0.2
CCP110-208ENST00000566523 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
CCP110-208ENST00000566523 CDK15Q96Q40 435 aa13.78□□□□□ -0.2
CCP110-208ENST00000566523 AGERQ15109 404 aa13.77□□□□□ -0.21
CCP110-208ENST00000566523 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
CCP110-208ENST00000566523 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
CCP110-208ENST00000566523 NR6A1Q15406 480 aa13.76□□□□□ -0.21
CCP110-208ENST00000566523 C1QTNF2Q9BXJ5 285 aa13.76□□□□□ -0.21
CCP110-208ENST00000566523 ATP13A2Q9NQ11 1180 aa13.76□□□□□ -0.21
CCP110-208ENST00000566523 ADH1CP00326 375 aa13.73□□□□□ -0.21
CCP110-208ENST00000566523 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
CCP110-208ENST00000566523 NNTQ13423 1086 aa13.73□□□□□ -0.21
CCP110-208ENST00000566523 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
CCP110-208ENST00000566523 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
CCP110-208ENST00000566523 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
CCP110-208ENST00000566523 CAPN5O15484 640 aaPredicted RBP13.71□□□□□ -0.21
CCP110-208ENST00000566523 PDXDC2PQ6P474 469 aa13.71□□□□□ -0.21
CCP110-208ENST00000566523 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
CCP110-208ENST00000566523 EPS8L1Q8TE68 723 aa13.7□□□□□ -0.22
CCP110-208ENST00000566523 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
CCP110-208ENST00000566523 GRM5P41594 1212 aa13.69□□□□□ -0.22
CCP110-208ENST00000566523 ARID5BQ14865 1188 aa13.69□□□□□ -0.22
CCP110-208ENST00000566523 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
CCP110-208ENST00000566523 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
CCP110-208ENST00000566523 TMEM259Q4ZIN3 620 aa13.68□□□□□ -0.22
CCP110-208ENST00000566523 KLF16Q9BXK1 252 aaPredicted RBP13.68□□□□□ -0.22
CCP110-208ENST00000566523 MAP4K5Q9Y4K4 846 aa13.67□□□□□ -0.22
CCP110-208ENST00000566523 NR3C2P08235 984 aa13.66□□□□□ -0.22
CCP110-208ENST00000566523 NR5A1Q13285 461 aa13.66□□□□□ -0.22
CCP110-208ENST00000566523 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
CCP110-208ENST00000566523 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
CCP110-208ENST00000566523 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
CCP110-208ENST00000566523 TIMP2P16035 220 aa13.65□□□□□ -0.22
CCP110-208ENST00000566523 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
CCP110-208ENST00000566523 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
CCP110-208ENST00000566523 ARHGAP9Q9BRR9 750 aa13.65□□□□□ -0.22
CCP110-208ENST00000566523 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
CCP110-208ENST00000566523 OCSTAMPQ9BR26 566 aa13.64□□□□□ -0.23
CCP110-208ENST00000566523 BMP1P13497 986 aa13.63□□□□□ -0.23
CCP110-208ENST00000566523 SNRPBP14678 240 aaKnown RBP13.63□□□□□ -0.23
CCP110-208ENST00000566523 WDR4P57081 412 aaKnown RBP13.63□□□□□ -0.23
CCP110-208ENST00000566523 TRIM34Q9BYJ4 488 aa13.63□□□□□ -0.23
CCP110-208ENST00000566523 GPSM3Q9Y4H4 160 aa13.62□□□□□ -0.23
CCP110-208ENST00000566523 VASH1Q7L8A9 365 aaPredicted RBP13.61□□□□□ -0.23
CCP110-208ENST00000566523 KIFC2Q96AC6 838 aa13.61□□□□□ -0.23
CCP110-208ENST00000566523 PTK2Q05397 1052 aa13.6□□□□□ -0.23
CCP110-208ENST00000566523 FSHRP23945 695 aa13.59□□□□□ -0.23
CCP110-208ENST00000566523 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
CCP110-208ENST00000566523 ZIC2O95409 532 aaPredicted RBP13.58□□□□□ -0.24
CCP110-208ENST00000566523 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
CCP110-208ENST00000566523 ITPKCQ96DU7 683 aa13.58□□□□□ -0.24
CCP110-208ENST00000566523 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
CCP110-208ENST00000566523 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
CCP110-208ENST00000566523 MRPL14Q6P1L8 145 aaKnown RBP13.55□□□□□ -0.24
CCP110-208ENST00000566523 BANK1Q8NDB2 785 aa13.55□□□□□ -0.24
CCP110-208ENST00000566523 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms