RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 GLI3P10071 1580 aa17.32■□□□□ 0.36
UBR1-206ENST00000566493 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
UBR1-206ENST00000566493 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
UBR1-206ENST00000566493 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
UBR1-206ENST00000566493 NUDT16Q96DE0 195 aaKnown RBP17.3■□□□□ 0.36
UBR1-206ENST00000566493 FAM83GA6ND36 823 aa17.29■□□□□ 0.36
UBR1-206ENST00000566493 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
UBR1-206ENST00000566493 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
UBR1-206ENST00000566493 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
UBR1-206ENST00000566493 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
UBR1-206ENST00000566493 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
UBR1-206ENST00000566493 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
UBR1-206ENST00000566493 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
UBR1-206ENST00000566493 ZRANB1Q9UGI0 708 aa17.26■□□□□ 0.35
UBR1-206ENST00000566493 ATP7BP35670 1465 aa17.25■□□□□ 0.35
UBR1-206ENST00000566493 A0A0G2JS52 829 aa17.25■□□□□ 0.35
UBR1-206ENST00000566493 MYT1Q01538 1121 aa17.25■□□□□ 0.35
UBR1-206ENST00000566493 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
UBR1-206ENST00000566493 EP400Q96L91 3159 aa17.24■□□□□ 0.35
UBR1-206ENST00000566493 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
UBR1-206ENST00000566493 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
UBR1-206ENST00000566493 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
UBR1-206ENST00000566493 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
UBR1-206ENST00000566493 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
UBR1-206ENST00000566493 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
UBR1-206ENST00000566493 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
UBR1-206ENST00000566493 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
UBR1-206ENST00000566493 ACEP12821 1306 aa17.21■□□□□ 0.35
UBR1-206ENST00000566493 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
UBR1-206ENST00000566493 FAM98CQ17RN3 349 aaKnown RBP17.2■□□□□ 0.34
UBR1-206ENST00000566493 NBPF8Q3BBV2 869 aa17.2■□□□□ 0.34
UBR1-206ENST00000566493 CRYBG1Q9Y4K1 1723 aa17.2■□□□□ 0.34
UBR1-206ENST00000566493 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
UBR1-206ENST00000566493 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
UBR1-206ENST00000566493 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
UBR1-206ENST00000566493 TOPAZ1Q8N9V7 1692 aa17.18■□□□□ 0.34
UBR1-206ENST00000566493 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
UBR1-206ENST00000566493 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
UBR1-206ENST00000566493 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
UBR1-206ENST00000566493 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
UBR1-206ENST00000566493 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
UBR1-206ENST00000566493 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
UBR1-206ENST00000566493 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
UBR1-206ENST00000566493 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
UBR1-206ENST00000566493 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
UBR1-206ENST00000566493 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
UBR1-206ENST00000566493 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
UBR1-206ENST00000566493 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
UBR1-206ENST00000566493 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
UBR1-206ENST00000566493 EVA1CP58658 441 aa17.14■□□□□ 0.33
UBR1-206ENST00000566493 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
UBR1-206ENST00000566493 STRN4Q9NRL3 753 aa17.14■□□□□ 0.33
UBR1-206ENST00000566493 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
UBR1-206ENST00000566493 BAG6P46379 1132 aa17.12■□□□□ 0.33
UBR1-206ENST00000566493 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
UBR1-206ENST00000566493 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
UBR1-206ENST00000566493 EVC2Q86UK5 1308 aa17.1■□□□□ 0.33
UBR1-206ENST00000566493 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
UBR1-206ENST00000566493 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
UBR1-206ENST00000566493 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
UBR1-206ENST00000566493 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
UBR1-206ENST00000566493 TRPM1Q7Z4N2 1603 aa17.09■□□□□ 0.33
UBR1-206ENST00000566493 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
UBR1-206ENST00000566493 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.32
UBR1-206ENST00000566493 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
UBR1-206ENST00000566493 USP19O94966 1318 aa17.08■□□□□ 0.32
UBR1-206ENST00000566493 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
UBR1-206ENST00000566493 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
UBR1-206ENST00000566493 CPDO75976 1380 aa17.07■□□□□ 0.32
UBR1-206ENST00000566493 GCP02774 474 aa17.07■□□□□ 0.32
UBR1-206ENST00000566493 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
UBR1-206ENST00000566493 NLRP6P59044 892 aa17.06■□□□□ 0.32
UBR1-206ENST00000566493 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
UBR1-206ENST00000566493 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
UBR1-206ENST00000566493 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
UBR1-206ENST00000566493 USP6P35125 1406 aa17.04■□□□□ 0.32
UBR1-206ENST00000566493 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
UBR1-206ENST00000566493 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
UBR1-206ENST00000566493 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
UBR1-206ENST00000566493 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
UBR1-206ENST00000566493 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
UBR1-206ENST00000566493 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
UBR1-206ENST00000566493 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
UBR1-206ENST00000566493 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
UBR1-206ENST00000566493 SRCAPQ6ZRS2 3230 aa17.01■□□□□ 0.31
UBR1-206ENST00000566493 TRIM37O94972 964 aa17■□□□□ 0.31
UBR1-206ENST00000566493 SLC4A2P04920 1241 aa17■□□□□ 0.31
UBR1-206ENST00000566493 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
UBR1-206ENST00000566493 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
UBR1-206ENST00000566493 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
UBR1-206ENST00000566493 SLIT3O75094 1523 aa16.98■□□□□ 0.31
UBR1-206ENST00000566493 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
UBR1-206ENST00000566493 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
UBR1-206ENST00000566493 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
UBR1-206ENST00000566493 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
UBR1-206ENST00000566493 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
UBR1-206ENST00000566493 CRB1P82279 1406 aa16.97■□□□□ 0.31
UBR1-206ENST00000566493 APBA3O96018 575 aa16.97■□□□□ 0.31
UBR1-206ENST00000566493 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
UBR1-206ENST00000566493 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms