RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 TESK2Q96S53 571 aa18.18■□□□□ 0.5
CNEP1R1-208ENST00000566482 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
CNEP1R1-208ENST00000566482 HAP1P54257 671 aaPredicted RBP18.16■□□□□ 0.5
CNEP1R1-208ENST00000566482 USP6P35125 1406 aa18.15■□□□□ 0.5
CNEP1R1-208ENST00000566482 CRYBG1Q9Y4K1 1723 aa18.13■□□□□ 0.49
CNEP1R1-208ENST00000566482 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
CNEP1R1-208ENST00000566482 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
CNEP1R1-208ENST00000566482 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
CNEP1R1-208ENST00000566482 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
CNEP1R1-208ENST00000566482 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
CNEP1R1-208ENST00000566482 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-208ENST00000566482 USP21Q9UK80 565 aa18.11■□□□□ 0.49
CNEP1R1-208ENST00000566482 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-208ENST00000566482 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
CNEP1R1-208ENST00000566482 ABTB2Q8N961 1025 aa18.1■□□□□ 0.49
CNEP1R1-208ENST00000566482 QTRT2Q9H974 415 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-208ENST00000566482 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
CNEP1R1-208ENST00000566482 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
CNEP1R1-208ENST00000566482 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
CNEP1R1-208ENST00000566482 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
CNEP1R1-208ENST00000566482 SLIT2O94813 1529 aa18.08■□□□□ 0.49
CNEP1R1-208ENST00000566482 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.49
CNEP1R1-208ENST00000566482 SOCS7O14512 581 aa18.08■□□□□ 0.48
CNEP1R1-208ENST00000566482 TMF1P82094 1093 aa18.08■□□□□ 0.48
CNEP1R1-208ENST00000566482 SLC12A5Q9H2X9 1139 aa18.08■□□□□ 0.48
CNEP1R1-208ENST00000566482 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.48
CNEP1R1-208ENST00000566482 CD163L1Q9NR16 1453 aa18.07■□□□□ 0.48
CNEP1R1-208ENST00000566482 ATRNO75882 1429 aa18.07■□□□□ 0.48
CNEP1R1-208ENST00000566482 USP19O94966 1318 aa18.07■□□□□ 0.48
CNEP1R1-208ENST00000566482 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
CNEP1R1-208ENST00000566482 RXRBP28702 533 aa18.07■□□□□ 0.48
CNEP1R1-208ENST00000566482 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
CNEP1R1-208ENST00000566482 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
CNEP1R1-208ENST00000566482 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
CNEP1R1-208ENST00000566482 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-208ENST00000566482 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
CNEP1R1-208ENST00000566482 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
CNEP1R1-208ENST00000566482 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-208ENST00000566482 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
CNEP1R1-208ENST00000566482 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 NLRP6P59044 892 aa18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 KIAA0232Q92628 1395 aa18.03■□□□□ 0.48
CNEP1R1-208ENST00000566482 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
CNEP1R1-208ENST00000566482 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
CNEP1R1-208ENST00000566482 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
CNEP1R1-208ENST00000566482 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
CNEP1R1-208ENST00000566482 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
CNEP1R1-208ENST00000566482 SLIT3O75094 1523 aa18.01■□□□□ 0.47
CNEP1R1-208ENST00000566482 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
CNEP1R1-208ENST00000566482 GCP02774 474 aa18■□□□□ 0.47
CNEP1R1-208ENST00000566482 CHRNA2Q15822 529 aa18■□□□□ 0.47
CNEP1R1-208ENST00000566482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
CNEP1R1-208ENST00000566482 BTG4Q9NY30 223 aa18■□□□□ 0.47
CNEP1R1-208ENST00000566482 RGS12O14924 1447 aa17.99■□□□□ 0.47
CNEP1R1-208ENST00000566482 GJD4Q96KN9 370 aaPredicted RBP17.98■□□□□ 0.47
CNEP1R1-208ENST00000566482 CPDO75976 1380 aa17.98■□□□□ 0.47
CNEP1R1-208ENST00000566482 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
CNEP1R1-208ENST00000566482 GLI3P10071 1580 aa17.97■□□□□ 0.47
CNEP1R1-208ENST00000566482 VPS72Q15906 364 aa17.97■□□□□ 0.47
CNEP1R1-208ENST00000566482 NME9Q86XW9 330 aa17.97■□□□□ 0.47
CNEP1R1-208ENST00000566482 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
CNEP1R1-208ENST00000566482 MYOM1P52179 1685 aa17.96■□□□□ 0.47
CNEP1R1-208ENST00000566482 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
CNEP1R1-208ENST00000566482 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
CNEP1R1-208ENST00000566482 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
CNEP1R1-208ENST00000566482 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
CNEP1R1-208ENST00000566482 NFAT5O94916 1531 aa17.93■□□□□ 0.46
CNEP1R1-208ENST00000566482 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
CNEP1R1-208ENST00000566482 SOX12O15370 315 aa17.93■□□□□ 0.46
CNEP1R1-208ENST00000566482 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
CNEP1R1-208ENST00000566482 CAMTA1Q9Y6Y1 1673 aa17.93■□□□□ 0.46
CNEP1R1-208ENST00000566482 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
CNEP1R1-208ENST00000566482 OVOS2A0A0J9YW53 1432 aa17.91■□□□□ 0.46
CNEP1R1-208ENST00000566482 OVOS2Q6IE36 1432 aa17.91■□□□□ 0.46
CNEP1R1-208ENST00000566482 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
CNEP1R1-208ENST00000566482 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
CNEP1R1-208ENST00000566482 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
CNEP1R1-208ENST00000566482 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
CNEP1R1-208ENST00000566482 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
CNEP1R1-208ENST00000566482 EVA1CP58658 441 aa17.89■□□□□ 0.45
CNEP1R1-208ENST00000566482 COL18A1P39060 1754 aa17.89■□□□□ 0.45
CNEP1R1-208ENST00000566482 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
CNEP1R1-208ENST00000566482 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
CNEP1R1-208ENST00000566482 CARD14Q9BXL6 1004 aa17.87■□□□□ 0.45
CNEP1R1-208ENST00000566482 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 LARP1Q6PKG0 1096 aaKnown RBP17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 SEPT12Q8IYM1 358 aa17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 COG3Q96JB2 828 aa17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 SPATA31A1Q5TZJ5 1347 aa17.86■□□□□ 0.45
CNEP1R1-208ENST00000566482 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms