RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF692Q9BU19 519 aaPredicted RBP29.47■■■□□ 2.31
SHCBP1-205ENST00000566016 SSH2Q76I76 1423 aa29.47■■■□□ 2.31
SHCBP1-205ENST00000566016 MYOM1P52179 1685 aa29.45■■■□□ 2.31
SHCBP1-205ENST00000566016 PAK3O75914 559 aaPredicted RBP29.42■■■□□ 2.3
SHCBP1-205ENST00000566016 NUTM2BA6NNL0 878 aaPredicted RBP29.42■■■□□ 2.3
SHCBP1-205ENST00000566016 NUTM2EB1AL46 878 aaPredicted RBP29.42■■■□□ 2.3
SHCBP1-205ENST00000566016 NUTM2AQ8IVF1 878 aaPredicted RBP29.42■■■□□ 2.3
SHCBP1-205ENST00000566016 KTN1Q86UP2 1357 aaKnown RBP29.41■■■□□ 2.3
SHCBP1-205ENST00000566016 LMOD2Q6P5Q4 547 aa29.41■■■□□ 2.3
SHCBP1-205ENST00000566016 TMC1Q8TDI8 760 aa29.41■■■□□ 2.3
SHCBP1-205ENST00000566016 SLC12A5Q9H2X9 1139 aa29.41■■■□□ 2.3
SHCBP1-205ENST00000566016 PIK3C2AO00443 1686 aa29.41■■■□□ 2.3
SHCBP1-205ENST00000566016 PHRF1Q9P1Y6 1649 aaKnown RBP29.4■■■□□ 2.3
SHCBP1-205ENST00000566016 TERF2IPQ9NYB0 399 aa29.39■■■□□ 2.3
SHCBP1-205ENST00000566016 A0A1W2PP64 1363 aa29.38■■■□□ 2.29
SHCBP1-205ENST00000566016 MEX3CQ5U5Q3 659 aaKnown RBP29.38■■■□□ 2.29
SHCBP1-205ENST00000566016 HDGFL2Q7Z4V5 671 aaPredicted RBP29.37■■■□□ 2.29
SHCBP1-205ENST00000566016 ANKRD36BQ8N2N9 1353 aa29.37■■■□□ 2.29
SHCBP1-205ENST00000566016 EDC4Q6P2E9 1401 aaKnown RBP29.37■■■□□ 2.29
SHCBP1-205ENST00000566016 PHF23Q9BUL5 403 aaPredicted RBP29.36■■■□□ 2.29
SHCBP1-205ENST00000566016 TTC21AQ8NDW8 1320 aa29.36■■■□□ 2.29
SHCBP1-205ENST00000566016 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
SHCBP1-205ENST00000566016 ABTB2Q8N961 1025 aa29.34■■■□□ 2.29
SHCBP1-205ENST00000566016 TTC21BQ7Z4L5 1316 aa29.34■■■□□ 2.29
SHCBP1-205ENST00000566016 ADAMTS2O95450 1211 aa29.32■■■□□ 2.28
SHCBP1-205ENST00000566016 USP19O94966 1318 aa29.32■■■□□ 2.28
SHCBP1-205ENST00000566016 CABLES1Q8TDN4 633 aa29.31■■■□□ 2.28
SHCBP1-205ENST00000566016 SLIT3O75094 1523 aa29.3■■■□□ 2.28
SHCBP1-205ENST00000566016 HAP1P54257 671 aaPredicted RBP29.29■■■□□ 2.28
SHCBP1-205ENST00000566016 NLRP13Q86W25 1043 aa29.29■■■□□ 2.28
SHCBP1-205ENST00000566016 NWD2Q9ULI1 1742 aa29.29■■■□□ 2.28
SHCBP1-205ENST00000566016 RGS17Q9UGC6 210 aaPredicted RBP29.29■■■□□ 2.28
SHCBP1-205ENST00000566016 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.28■■■□□ 2.28
SHCBP1-205ENST00000566016 C8orf37Q96NL8 207 aa29.28■■■□□ 2.28
SHCBP1-205ENST00000566016 PLCH1Q4KWH8 1693 aa29.27■■■□□ 2.28
SHCBP1-205ENST00000566016 COL14A1Q05707 1796 aaKnown RBP29.26■■■□□ 2.28
SHCBP1-205ENST00000566016 AFF2P51816 1311 aa29.25■■■□□ 2.27
SHCBP1-205ENST00000566016 FNBP4Q8N3X1 1017 aaPredicted RBP29.25■■■□□ 2.27
SHCBP1-205ENST00000566016 USP31Q70CQ4 1352 aa29.25■■■□□ 2.27
SHCBP1-205ENST00000566016 NLRP6P59044 892 aa29.24■■■□□ 2.27
SHCBP1-205ENST00000566016 NUTM2GQ5VZR2 741 aa29.24■■■□□ 2.27
SHCBP1-205ENST00000566016 ZNF772Q68DY9 489 aaPredicted RBP29.24■■■□□ 2.27
SHCBP1-205ENST00000566016 NGLY1Q96IV0 654 aa29.24■■■□□ 2.27
SHCBP1-205ENST00000566016 SLIT2O94813 1529 aa29.24■■■□□ 2.27
SHCBP1-205ENST00000566016 ZEB1P37275 1124 aaPredicted RBP29.23■■■□□ 2.27
SHCBP1-205ENST00000566016 C11orf95C9JLR9 678 aaPredicted RBP29.22■■■□□ 2.27
SHCBP1-205ENST00000566016 KIF20BQ96Q89 1820 aa29.21■■■□□ 2.27
SHCBP1-205ENST00000566016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.21■■■□□ 2.27
SHCBP1-205ENST00000566016 CPDO75976 1380 aa29.21■■■□□ 2.27
SHCBP1-205ENST00000566016 PLEKHG5O94827 1062 aa29.2■■■□□ 2.26
SHCBP1-205ENST00000566016 OVOS2A0A0J9YW53 1432 aa29.19■■■□□ 2.26
SHCBP1-205ENST00000566016 OVOS2Q6IE36 1432 aa29.19■■■□□ 2.26
SHCBP1-205ENST00000566016 KIF7Q2M1P5 1343 aa29.19■■■□□ 2.26
SHCBP1-205ENST00000566016 BCL9LQ86UU0 1499 aa29.19■■■□□ 2.26
SHCBP1-205ENST00000566016 GCP02774 474 aa29.18■■■□□ 2.26
SHCBP1-205ENST00000566016 NRAPQ86VF7 1730 aa29.17■■■□□ 2.26
SHCBP1-205ENST00000566016 NFAT5O94916 1531 aa29.17■■■□□ 2.26
SHCBP1-205ENST00000566016 KIAA0232Q92628 1395 aa29.17■■■□□ 2.26
SHCBP1-205ENST00000566016 NME9Q86XW9 330 aa29.17■■■□□ 2.26
SHCBP1-205ENST00000566016 POLR3GLQ9BT43 218 aa29.16■■■□□ 2.26
SHCBP1-205ENST00000566016 LMO7Q8WWI1 1683 aa29.15■■■□□ 2.26
SHCBP1-205ENST00000566016 FAM83GA6ND36 823 aa29.15■■■□□ 2.26
SHCBP1-205ENST00000566016 KCNH5Q8NCM2 988 aa29.15■■■□□ 2.26
SHCBP1-205ENST00000566016 PRDM11Q9NQV5 511 aa29.15■■■□□ 2.26
SHCBP1-205ENST00000566016 USP21Q9UK80 565 aa29.15■■■□□ 2.26
SHCBP1-205ENST00000566016 NSD3Q9BZ95 1437 aa29.14■■■□□ 2.26
SHCBP1-205ENST00000566016 POTEAQ6S8J7 498 aa29.14■■■□□ 2.26
SHCBP1-205ENST00000566016 CARD14Q9BXL6 1004 aa29.13■■■□□ 2.25
SHCBP1-205ENST00000566016 ATRNO75882 1429 aa29.13■■■□□ 2.25
SHCBP1-205ENST00000566016 CCDC7Q96M83 1385 aa29.12■■■□□ 2.25
SHCBP1-205ENST00000566016 ABCC6O95255 1503 aa29.11■■■□□ 2.25
SHCBP1-205ENST00000566016 ZC3H6P61129 1189 aaKnown RBP29.1■■■□□ 2.25
SHCBP1-205ENST00000566016 UNC5CLQ8IV45 518 aa29.1■■■□□ 2.25
SHCBP1-205ENST00000566016 COL18A1P39060 1754 aa29.1■■■□□ 2.25
SHCBP1-205ENST00000566016 LTN1O94822 1766 aa29.09■■■□□ 2.25
SHCBP1-205ENST00000566016 ZRANB1Q9UGI0 708 aa29.09■■■□□ 2.25
SHCBP1-205ENST00000566016 TRPC5Q9UL62 973 aaPredicted RBP29.09■■■□□ 2.25
SHCBP1-205ENST00000566016 ANKRD26Q9UPS8 1709 aa29.08■■■□□ 2.25
SHCBP1-205ENST00000566016 WASHC2AQ641Q2 1341 aa29.08■■■□□ 2.25
SHCBP1-205ENST00000566016 FYB1O15117 783 aa29.07■■■□□ 2.24
SHCBP1-205ENST00000566016 AATKQ6ZMQ8 1374 aa29.06■■■□□ 2.24
SHCBP1-205ENST00000566016 COG3Q96JB2 828 aa29.06■■■□□ 2.24
SHCBP1-205ENST00000566016 QTRT2Q9H974 415 aaKnown RBP29.06■■■□□ 2.24
SHCBP1-205ENST00000566016 CGNL1Q0VF96 1302 aa29.05■■■□□ 2.24
SHCBP1-205ENST00000566016 PANK3Q9H999 370 aa29.05■■■□□ 2.24
SHCBP1-205ENST00000566016 BTG4Q9NY30 223 aa29.05■■■□□ 2.24
SHCBP1-205ENST00000566016 CDK12Q9NYV4 1490 aaPredicted RBP29.05■■■□□ 2.24
SHCBP1-205ENST00000566016 CAMTA1Q9Y6Y1 1673 aa29.05■■■□□ 2.24
SHCBP1-205ENST00000566016 CHRNA2Q15822 529 aa29.04■■■□□ 2.24
SHCBP1-205ENST00000566016 ARHGEF25Q86VW2 580 aa29.04■■■□□ 2.24
SHCBP1-205ENST00000566016 RBM6P78332 1123 aaKnown RBP29.02■■■□□ 2.24
SHCBP1-205ENST00000566016 RXRBP28702 533 aa29.01■■■□□ 2.23
SHCBP1-205ENST00000566016 VPS72Q15906 364 aa29.01■■■□□ 2.23
SHCBP1-205ENST00000566016 ILDR2Q71H61 639 aa29.01■■■□□ 2.23
SHCBP1-205ENST00000566016 GLI3P10071 1580 aa29.01■■■□□ 2.23
SHCBP1-205ENST00000566016 RGPD5Q99666 1765 aa29■■■□□ 2.23
SHCBP1-205ENST00000566016 GGNBP2Q9H3C7 697 aa29■■■□□ 2.23
SHCBP1-205ENST00000566016 NSD2O96028 1365 aa28.99■■■□□ 2.23
SHCBP1-205ENST00000566016 COL5A2P05997 1499 aaPredicted RBP28.99■■■□□ 2.23
SHCBP1-205ENST00000566016 SOX12O15370 315 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms