RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 AHDC1Q5TGY3 1603 aaPredicted RBP9.56□□□□□ -0.88
TCF4-229ENST00000565580 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
TCF4-229ENST00000565580 SETD1AO15047 1707 aaKnown RBP9.55□□□□□ -0.88
TCF4-229ENST00000565580 DCCP43146 1447 aa9.55□□□□□ -0.88
TCF4-229ENST00000565580 MST1RQ04912 1400 aa9.55□□□□□ -0.88
TCF4-229ENST00000565580 ADGRL3Q9HAR2 1447 aa9.54□□□□□ -0.88
TCF4-229ENST00000565580 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
TCF4-229ENST00000565580 LRP6O75581 1613 aa9.53□□□□□ -0.88
TCF4-229ENST00000565580 PPLO60437 1756 aa9.53□□□□□ -0.88
TCF4-229ENST00000565580 ASXL1Q8IXJ9 1541 aa9.53□□□□□ -0.88
TCF4-229ENST00000565580 VGFO15240 615 aaPredicted RBP9.53□□□□□ -0.88
TCF4-229ENST00000565580 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
TCF4-229ENST00000565580 MPHOSPH9Q99550 1183 aa9.53□□□□□ -0.88
TCF4-229ENST00000565580 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
TCF4-229ENST00000565580 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.88
TCF4-229ENST00000565580 PTCH1Q13635 1447 aa9.52□□□□□ -0.89
TCF4-229ENST00000565580 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
TCF4-229ENST00000565580 CCDC144AA2RUR9 1427 aa9.51□□□□□ -0.89
TCF4-229ENST00000565580 SPATA31E1Q6ZUB1 1445 aa9.51□□□□□ -0.89
TCF4-229ENST00000565580 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
TCF4-229ENST00000565580 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
TCF4-229ENST00000565580 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
TCF4-229ENST00000565580 SPATA31A6Q5VVP1 1343 aa9.51□□□□□ -0.89
TCF4-229ENST00000565580 PRAG1Q86YV5 1406 aa9.5□□□□□ -0.89
TCF4-229ENST00000565580 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
TCF4-229ENST00000565580 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
TCF4-229ENST00000565580 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
TCF4-229ENST00000565580 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
TCF4-229ENST00000565580 IFT172Q9UG01 1749 aa9.48□□□□□ -0.89
TCF4-229ENST00000565580 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
TCF4-229ENST00000565580 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
TCF4-229ENST00000565580 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
TCF4-229ENST00000565580 EMP3P54852 163 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
TCF4-229ENST00000565580 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 ORAI2Q96SN7 254 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 ANKRD30BQ9BXX2 1392 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
TCF4-229ENST00000565580 TMEM132EQ6IEE7 984 aa9.46□□□□□ -0.9
TCF4-229ENST00000565580 LRRC59Q96AG4 307 aaKnown RBP9.46□□□□□ -0.9
TCF4-229ENST00000565580 STK26Q9P289 416 aa9.46□□□□□ -0.9
TCF4-229ENST00000565580 PNPLA6Q8IY17 1366 aa9.46□□□□□ -0.9
TCF4-229ENST00000565580 PIK3C2GO75747 1445 aa9.46□□□□□ -0.9
TCF4-229ENST00000565580 WAPLQ7Z5K2 1190 aa9.45□□□□□ -0.9
TCF4-229ENST00000565580 LRPPRCP42704 1394 aaKnown RBP9.45□□□□□ -0.9
TCF4-229ENST00000565580 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
TCF4-229ENST00000565580 TECPR2O15040 1411 aa9.45□□□□□ -0.9
TCF4-229ENST00000565580 LAMC1P11047 1609 aa9.45□□□□□ -0.9
TCF4-229ENST00000565580 ZNF772Q68DY9 489 aaPredicted RBP9.44□□□□□ -0.9
TCF4-229ENST00000565580 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
TCF4-229ENST00000565580 NRXN1Q9ULB1 1477 aa9.43□□□□□ -0.9
TCF4-229ENST00000565580 ABCC11Q96J66 1382 aa9.43□□□□□ -0.9
TCF4-229ENST00000565580 AFF2P51816 1311 aa9.43□□□□□ -0.9
TCF4-229ENST00000565580 SOS2Q07890 1332 aaPredicted RBP9.43□□□□□ -0.9
TCF4-229ENST00000565580 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
TCF4-229ENST00000565580 KNDC1Q76NI1 1749 aa9.42□□□□□ -0.9
TCF4-229ENST00000565580 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
TCF4-229ENST00000565580 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
TCF4-229ENST00000565580 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
TCF4-229ENST00000565580 CFAP70Q5T0N1 1121 aa9.42□□□□□ -0.9
TCF4-229ENST00000565580 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
TCF4-229ENST00000565580 MYOM2P54296 1465 aa9.41□□□□□ -0.9
TCF4-229ENST00000565580 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
TCF4-229ENST00000565580 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
TCF4-229ENST00000565580 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
TCF4-229ENST00000565580 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
TCF4-229ENST00000565580 PXDNQ92626 1479 aa9.4□□□□□ -0.9
TCF4-229ENST00000565580 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
TCF4-229ENST00000565580 RXRBP28702 533 aa9.4□□□□□ -0.9
TCF4-229ENST00000565580 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
TCF4-229ENST00000565580 NPHP3Q7Z494 1330 aa9.39□□□□□ -0.91
TCF4-229ENST00000565580 FOXO3O43524 673 aa9.39□□□□□ -0.91
TCF4-229ENST00000565580 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
TCF4-229ENST00000565580 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
TCF4-229ENST00000565580 DOK7Q18PE1 504 aa9.38□□□□□ -0.91
TCF4-229ENST00000565580 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
TCF4-229ENST00000565580 SIRT1Q96EB6 747 aa9.38□□□□□ -0.91
TCF4-229ENST00000565580 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
TCF4-229ENST00000565580 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
TCF4-229ENST00000565580 CDK12Q9NYV4 1490 aaPredicted RBP9.37□□□□□ -0.91
TCF4-229ENST00000565580 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
TCF4-229ENST00000565580 NGLY1Q96IV0 654 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 PRAM1Q96QH2 718 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
TCF4-229ENST00000565580 RGS12O14924 1447 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 ADGRB1O14514 1584 aa9.37□□□□□ -0.91
TCF4-229ENST00000565580 UPF1Q92900 1129 aaKnown RBP eCLIP9.36□□□□□ -0.91
TCF4-229ENST00000565580 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
TCF4-229ENST00000565580 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
TCF4-229ENST00000565580 SOX12O15370 315 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 HRCP23327 699 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
TCF4-229ENST00000565580 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 USP21Q9UK80 565 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 KIF1AQ12756 1690 aa9.35□□□□□ -0.91
TCF4-229ENST00000565580 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms