RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 ZRANB1Q9UGI0 708 aa27.36■■□□□ 1.97
SPSB3-207ENST00000565550 KRT27Q7Z3Y8 459 aa27.33■■□□□ 1.97
SPSB3-207ENST00000565550 CCDC61Q9Y6R9 512 aa27.33■■□□□ 1.97
SPSB3-207ENST00000565550 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.96
SPSB3-207ENST00000565550 A0A0G2JS52 829 aa27.32■■□□□ 1.96
SPSB3-207ENST00000565550 MYT1Q01538 1121 aa27.32■■□□□ 1.96
SPSB3-207ENST00000565550 FAM98CQ17RN3 349 aaKnown RBP27.32■■□□□ 1.96
SPSB3-207ENST00000565550 PCGF6Q9BYE7 350 aa27.31■■□□□ 1.96
SPSB3-207ENST00000565550 BRWD3Q6RI45 1802 aa27.31■■□□□ 1.96
SPSB3-207ENST00000565550 ACEP12821 1306 aa27.31■■□□□ 1.96
SPSB3-207ENST00000565550 NBPF8Q3BBV2 869 aa27.3■■□□□ 1.96
SPSB3-207ENST00000565550 PRDM11Q9NQV5 511 aa27.3■■□□□ 1.96
SPSB3-207ENST00000565550 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
SPSB3-207ENST00000565550 NUTM2GQ5VZR2 741 aa27.29■■□□□ 1.96
SPSB3-207ENST00000565550 DEFB132Q7Z7B7 95 aa27.29■■□□□ 1.96
SPSB3-207ENST00000565550 POLR3AO14802 1390 aaPredicted RBP27.28■■□□□ 1.96
SPSB3-207ENST00000565550 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SPSB3-207ENST00000565550 SF3B2Q13435 895 aaKnown RBP27.28■■□□□ 1.96
SPSB3-207ENST00000565550 COL14A1Q05707 1796 aaKnown RBP27.27■■□□□ 1.96
SPSB3-207ENST00000565550 ITSN1Q15811 1721 aa27.27■■□□□ 1.96
SPSB3-207ENST00000565550 NRAPQ86VF7 1730 aa27.27■■□□□ 1.96
SPSB3-207ENST00000565550 SPATA31A5Q5VU36 1347 aa27.26■■□□□ 1.95
SPSB3-207ENST00000565550 SPATA31A7Q8IWB4 1347 aa27.26■■□□□ 1.95
SPSB3-207ENST00000565550 KIAA0232Q92628 1395 aa27.25■■□□□ 1.95
SPSB3-207ENST00000565550 CENPJQ9HC77 1338 aaPredicted RBP27.25■■□□□ 1.95
SPSB3-207ENST00000565550 CHRNA2Q15822 529 aa27.25■■□□□ 1.95
SPSB3-207ENST00000565550 L3MBTL2Q969R5 705 aa27.25■■□□□ 1.95
SPSB3-207ENST00000565550 ZC3H6P61129 1189 aaKnown RBP27.24■■□□□ 1.95
SPSB3-207ENST00000565550 SRPK2P78362 688 aaKnown RBP27.24■■□□□ 1.95
SPSB3-207ENST00000565550 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
SPSB3-207ENST00000565550 SIN3AQ96ST3 1273 aa27.22■■□□□ 1.95
SPSB3-207ENST00000565550 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
SPSB3-207ENST00000565550 ABTB2Q8N961 1025 aa27.21■■□□□ 1.95
SPSB3-207ENST00000565550 STRN4Q9NRL3 753 aa27.2■■□□□ 1.94
SPSB3-207ENST00000565550 TOPAZ1Q8N9V7 1692 aa27.19■■□□□ 1.94
SPSB3-207ENST00000565550 FAM182BQ5T319 152 aa27.18■■□□□ 1.94
SPSB3-207ENST00000565550 SRCAPQ6ZRS2 3230 aa27.18■■□□□ 1.94
SPSB3-207ENST00000565550 PPIP5K1Q6PFW1 1433 aa27.17■■□□□ 1.94
SPSB3-207ENST00000565550 SPATA31A1Q5TZJ5 1347 aa27.16■■□□□ 1.94
SPSB3-207ENST00000565550 NEUROD1Q13562 356 aa27.16■■□□□ 1.94
SPSB3-207ENST00000565550 EVA1CP58658 441 aa27.14■■□□□ 1.94
SPSB3-207ENST00000565550 CABP1Q9NZU7 370 aa27.14■■□□□ 1.94
SPSB3-207ENST00000565550 PHRF1Q9P1Y6 1649 aaKnown RBP27.14■■□□□ 1.94
SPSB3-207ENST00000565550 BAG6P46379 1132 aa27.13■■□□□ 1.93
SPSB3-207ENST00000565550 NLRP13Q86W25 1043 aa27.13■■□□□ 1.93
SPSB3-207ENST00000565550 USP19O94966 1318 aa27.12■■□□□ 1.93
SPSB3-207ENST00000565550 USP35Q9P2H5 1018 aa27.11■■□□□ 1.93
SPSB3-207ENST00000565550 GCP02774 474 aa27.1■■□□□ 1.93
SPSB3-207ENST00000565550 CPDO75976 1380 aa27.09■■□□□ 1.93
SPSB3-207ENST00000565550 THSD7AQ9UPZ6 1657 aa27.08■■□□□ 1.93
SPSB3-207ENST00000565550 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.92
SPSB3-207ENST00000565550 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
SPSB3-207ENST00000565550 EN1Q05925 392 aaPredicted RBP27.07■■□□□ 1.92
SPSB3-207ENST00000565550 LARP1Q6PKG0 1096 aaKnown RBP27.07■■□□□ 1.92
SPSB3-207ENST00000565550 EVC2Q86UK5 1308 aa27.07■■□□□ 1.92
SPSB3-207ENST00000565550 BRD4O60885 1362 aaPredicted RBP27.07■■□□□ 1.92
SPSB3-207ENST00000565550 NRKQ7Z2Y5 1582 aa27.06■■□□□ 1.92
SPSB3-207ENST00000565550 CAMTA1Q9Y6Y1 1673 aa27.06■■□□□ 1.92
SPSB3-207ENST00000565550 NLRP6P59044 892 aa27.05■■□□□ 1.92
SPSB3-207ENST00000565550 BARGINQ6ZT62 677 aa27.05■■□□□ 1.92
SPSB3-207ENST00000565550 ROCK2O75116 1388 aaKnown RBP27.05■■□□□ 1.92
SPSB3-207ENST00000565550 USP6P35125 1406 aa27.04■■□□□ 1.92
SPSB3-207ENST00000565550 FAM196AQ6ZSG2 479 aa27.03■■□□□ 1.92
SPSB3-207ENST00000565550 TRPM1Q7Z4N2 1603 aa27.02■■□□□ 1.92
SPSB3-207ENST00000565550 TCP11L2Q8N4U5 519 aa27.02■■□□□ 1.92
SPSB3-207ENST00000565550 ZBTB7CA1YPR0 619 aa27.01■■□□□ 1.91
SPSB3-207ENST00000565550 PSDA5PKW4 1024 aaPredicted RBP27■■□□□ 1.91
SPSB3-207ENST00000565550 TRIM37O94972 964 aa27■■□□□ 1.91
SPSB3-207ENST00000565550 PDE3BQ13370 1112 aa27■■□□□ 1.91
SPSB3-207ENST00000565550 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
SPSB3-207ENST00000565550 ZNF692Q9BU19 519 aaPredicted RBP26.97■■□□□ 1.91
SPSB3-207ENST00000565550 THRAP3Q9Y2W1 955 aaKnown RBP26.97■■□□□ 1.91
SPSB3-207ENST00000565550 RGPD1P0DJD0 1748 aa26.96■■□□□ 1.91
SPSB3-207ENST00000565550 EZH2Q15910 746 aaKnown RBP26.96■■□□□ 1.91
SPSB3-207ENST00000565550 DISP2A7MBM2 1401 aa26.95■■□□□ 1.9
SPSB3-207ENST00000565550 COL5A2P05997 1499 aaPredicted RBP26.94■■□□□ 1.9
SPSB3-207ENST00000565550 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
SPSB3-207ENST00000565550 AATKQ6ZMQ8 1374 aa26.94■■□□□ 1.9
SPSB3-207ENST00000565550 APBA3O96018 575 aa26.93■■□□□ 1.9
SPSB3-207ENST00000565550 CAMKK2Q96RR4 588 aa26.93■■□□□ 1.9
SPSB3-207ENST00000565550 SLIT3O75094 1523 aa26.92■■□□□ 1.9
SPSB3-207ENST00000565550 CRB1P82279 1406 aa26.9■■□□□ 1.9
SPSB3-207ENST00000565550 R3HDM1Q15032 1099 aaKnown RBP26.9■■□□□ 1.9
SPSB3-207ENST00000565550 TNS1Q9HBL0 1735 aaKnown RBP26.9■■□□□ 1.9
SPSB3-207ENST00000565550 CARD11Q9BXL7 1154 aa26.89■■□□□ 1.9
SPSB3-207ENST00000565550 AXIN2Q9Y2T1 843 aa26.89■■□□□ 1.9
SPSB3-207ENST00000565550 TOM1L2Q6ZVM7 507 aa26.88■■□□□ 1.89
SPSB3-207ENST00000565550 PIK3C2AO00443 1686 aa26.88■■□□□ 1.89
SPSB3-207ENST00000565550 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
SPSB3-207ENST00000565550 SOX12O15370 315 aa26.87■■□□□ 1.89
SPSB3-207ENST00000565550 ARHGEF25Q86VW2 580 aa26.87■■□□□ 1.89
SPSB3-207ENST00000565550 KCNH5Q8NCM2 988 aa26.87■■□□□ 1.89
SPSB3-207ENST00000565550 CPSF1Q10570 1443 aaKnown RBP26.87■■□□□ 1.89
SPSB3-207ENST00000565550 TTC21AQ8NDW8 1320 aa26.87■■□□□ 1.89
SPSB3-207ENST00000565550 KTN1Q86UP2 1357 aaKnown RBP26.85■■□□□ 1.89
SPSB3-207ENST00000565550 WDR17Q8IZU2 1322 aa26.83■■□□□ 1.89
SPSB3-207ENST00000565550 PARD3Q8TEW0 1356 aa26.83■■□□□ 1.88
SPSB3-207ENST00000565550 SBNO2Q9Y2G9 1366 aa26.83■■□□□ 1.88
SPSB3-207ENST00000565550 LRP5O75197 1615 aa26.81■■□□□ 1.88
SPSB3-207ENST00000565550 DDB1Q16531 1140 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms