RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 POLR3AO14802 1390 aaPredicted RBP14.45□□□□□ -0.1
CMTM3-209ENST00000565003 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
CMTM3-209ENST00000565003 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
CMTM3-209ENST00000565003 ATAD2Q6PL18 1390 aa14.44□□□□□ -0.1
CMTM3-209ENST00000565003 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
CMTM3-209ENST00000565003 ACEP12821 1306 aa14.42□□□□□ -0.1
CMTM3-209ENST00000565003 PLEKHG3A1L390 1219 aa14.42□□□□□ -0.1
CMTM3-209ENST00000565003 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
CMTM3-209ENST00000565003 VPS72Q15906 364 aa14.42□□□□□ -0.1
CMTM3-209ENST00000565003 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
CMTM3-209ENST00000565003 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
CMTM3-209ENST00000565003 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
CMTM3-209ENST00000565003 NBPF8Q3BBV2 869 aa14.41□□□□□ -0.1
CMTM3-209ENST00000565003 COL14A1Q05707 1796 aaKnown RBP14.41□□□□□ -0.1
CMTM3-209ENST00000565003 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
CMTM3-209ENST00000565003 NUTM2GQ5VZR2 741 aa14.39□□□□□ -0.11
CMTM3-209ENST00000565003 BTG4Q9NY30 223 aa14.39□□□□□ -0.11
CMTM3-209ENST00000565003 CCDC9Q9Y3X0 531 aaKnown RBP14.39□□□□□ -0.11
CMTM3-209ENST00000565003 BRWD3Q6RI45 1802 aa14.38□□□□□ -0.11
CMTM3-209ENST00000565003 KIAA0232Q92628 1395 aa14.37□□□□□ -0.11
CMTM3-209ENST00000565003 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
CMTM3-209ENST00000565003 SEPT12Q8IYM1 358 aa14.37□□□□□ -0.11
CMTM3-209ENST00000565003 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
CMTM3-209ENST00000565003 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
CMTM3-209ENST00000565003 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
CMTM3-209ENST00000565003 EP400Q96L91 3159 aa14.35□□□□□ -0.11
CMTM3-209ENST00000565003 USP6P35125 1406 aa14.35□□□□□ -0.11
CMTM3-209ENST00000565003 ONECUT3O60422 494 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-209ENST00000565003 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
CMTM3-209ENST00000565003 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
CMTM3-209ENST00000565003 USP19O94966 1318 aa14.35□□□□□ -0.11
CMTM3-209ENST00000565003 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
CMTM3-209ENST00000565003 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
CMTM3-209ENST00000565003 CHRNA2Q15822 529 aa14.34□□□□□ -0.11
CMTM3-209ENST00000565003 FAM98CQ17RN3 349 aaKnown RBP14.33□□□□□ -0.12
CMTM3-209ENST00000565003 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.12
CMTM3-209ENST00000565003 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.12
CMTM3-209ENST00000565003 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
CMTM3-209ENST00000565003 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
CMTM3-209ENST00000565003 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-209ENST00000565003 LMO7Q8WWI1 1683 aa14.31□□□□□ -0.12
CMTM3-209ENST00000565003 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
CMTM3-209ENST00000565003 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
CMTM3-209ENST00000565003 BLMP54132 1417 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-209ENST00000565003 PIK3C2AO00443 1686 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 A0A0G2JS52 829 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 MYT1Q01538 1121 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 STRN4Q9NRL3 753 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 CPDO75976 1380 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
CMTM3-209ENST00000565003 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
CMTM3-209ENST00000565003 SLIT3O75094 1523 aa14.29□□□□□ -0.12
CMTM3-209ENST00000565003 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
CMTM3-209ENST00000565003 GCP02774 474 aa14.28□□□□□ -0.12
CMTM3-209ENST00000565003 CPSF1Q10570 1443 aaKnown RBP14.28□□□□□ -0.12
CMTM3-209ENST00000565003 NLRP6P59044 892 aa14.27□□□□□ -0.13
CMTM3-209ENST00000565003 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-209ENST00000565003 TTC21BQ7Z4L5 1316 aa14.25□□□□□ -0.13
CMTM3-209ENST00000565003 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
CMTM3-209ENST00000565003 DEFB132Q7Z7B7 95 aa14.25□□□□□ -0.13
CMTM3-209ENST00000565003 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-209ENST00000565003 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
CMTM3-209ENST00000565003 EVA1CP58658 441 aa14.24□□□□□ -0.13
CMTM3-209ENST00000565003 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
CMTM3-209ENST00000565003 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
CMTM3-209ENST00000565003 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
CMTM3-209ENST00000565003 KTN1Q86UP2 1357 aaKnown RBP14.23□□□□□ -0.13
CMTM3-209ENST00000565003 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
CMTM3-209ENST00000565003 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
CMTM3-209ENST00000565003 COL18A1P39060 1754 aa14.22□□□□□ -0.13
CMTM3-209ENST00000565003 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
CMTM3-209ENST00000565003 SF3B2Q13435 895 aaKnown RBP14.22□□□□□ -0.13
CMTM3-209ENST00000565003 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
CMTM3-209ENST00000565003 NFAT5O94916 1531 aa14.2□□□□□ -0.14
CMTM3-209ENST00000565003 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
CMTM3-209ENST00000565003 TESK2Q96S53 571 aa14.2□□□□□ -0.14
CMTM3-209ENST00000565003 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
CMTM3-209ENST00000565003 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 CRB1P82279 1406 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 ST20-MTHFSA0A0A6YYL1 179 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 SOX12O15370 315 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 ARHGEF25Q86VW2 580 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
CMTM3-209ENST00000565003 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 SLC12A5Q9H2X9 1139 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
CMTM3-209ENST00000565003 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
CMTM3-209ENST00000565003 USP54Q70EL1 1684 aa14.18□□□□□ -0.14
CMTM3-209ENST00000565003 KCNH5Q8NCM2 988 aa14.18□□□□□ -0.14
CMTM3-209ENST00000565003 A0A1W2PP64 1363 aa14.18□□□□□ -0.14
CMTM3-209ENST00000565003 BAG6P46379 1132 aa14.17□□□□□ -0.14
CMTM3-209ENST00000565003 NME9Q86XW9 330 aa14.17□□□□□ -0.14
CMTM3-209ENST00000565003 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
CMTM3-209ENST00000565003 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
CMTM3-209ENST00000565003 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
CMTM3-209ENST00000565003 EDC4Q6P2E9 1401 aaKnown RBP14.16□□□□□ -0.14
CMTM3-209ENST00000565003 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms