RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 BLMP54132 1417 aaPredicted RBP29.24■■■□□ 2.27
COTL1-204ENST00000564662 SEPT12Q8IYM1 358 aa29.24■■■□□ 2.27
COTL1-204ENST00000564662 PAK3O75914 559 aaPredicted RBP29.21■■■□□ 2.27
COTL1-204ENST00000564662 A0A0G2JS52 829 aa29.19■■■□□ 2.26
COTL1-204ENST00000564662 MYT1Q01538 1121 aa29.19■■■□□ 2.26
COTL1-204ENST00000564662 BTG4Q9NY30 223 aa29.19■■■□□ 2.26
COTL1-204ENST00000564662 ZRANB1Q9UGI0 708 aa29.19■■■□□ 2.26
COTL1-204ENST00000564662 NUDT16Q96DE0 195 aaKnown RBP29.17■■■□□ 2.26
COTL1-204ENST00000564662 QRICH2Q9H0J4 1663 aa29.16■■■□□ 2.26
COTL1-204ENST00000564662 KRT27Q7Z3Y8 459 aa29.14■■■□□ 2.26
COTL1-204ENST00000564662 THSD7AQ9UPZ6 1657 aa29.13■■■□□ 2.25
COTL1-204ENST00000564662 ONECUT3O60422 494 aaPredicted RBP29.13■■■□□ 2.25
COTL1-204ENST00000564662 FAM98CQ17RN3 349 aaKnown RBP29.13■■■□□ 2.25
COTL1-204ENST00000564662 CDK19Q9BWU1 502 aa29.13■■■□□ 2.25
COTL1-204ENST00000564662 NRKQ7Z2Y5 1582 aa29.11■■■□□ 2.25
COTL1-204ENST00000564662 SF3B2Q13435 895 aaKnown RBP29.11■■■□□ 2.25
COTL1-204ENST00000564662 PRDM11Q9NQV5 511 aa29.11■■■□□ 2.25
COTL1-204ENST00000564662 RGPD1P0DJD0 1748 aa29.11■■■□□ 2.25
COTL1-204ENST00000564662 DEFB132Q7Z7B7 95 aa29.1■■■□□ 2.25
COTL1-204ENST00000564662 POLR3AO14802 1390 aaPredicted RBP29.1■■■□□ 2.25
COTL1-204ENST00000564662 NBPF1Q3BBV0 1214 aa29.09■■■□□ 2.25
COTL1-204ENST00000564662 KIAA0232Q92628 1395 aa29.08■■■□□ 2.25
COTL1-204ENST00000564662 ACEP12821 1306 aa29.07■■■□□ 2.24
COTL1-204ENST00000564662 SPATA31A5Q5VU36 1347 aa29.06■■■□□ 2.24
COTL1-204ENST00000564662 SPATA31A7Q8IWB4 1347 aa29.06■■■□□ 2.24
COTL1-204ENST00000564662 NUTM2GQ5VZR2 741 aa29.06■■■□□ 2.24
COTL1-204ENST00000564662 TNS1Q9HBL0 1735 aaKnown RBP29.04■■■□□ 2.24
COTL1-204ENST00000564662 CCDC61Q9Y6R9 512 aa29.04■■■□□ 2.24
COTL1-204ENST00000564662 TRPM1Q7Z4N2 1603 aa29.04■■■□□ 2.24
COTL1-204ENST00000564662 CHRNA2Q15822 529 aa29.03■■■□□ 2.24
COTL1-204ENST00000564662 PPIP5K1Q6PFW1 1433 aa29.03■■■□□ 2.24
COTL1-204ENST00000564662 CENPJQ9HC77 1338 aaPredicted RBP29.02■■■□□ 2.24
COTL1-204ENST00000564662 NBPF8Q3BBV2 869 aa29.01■■■□□ 2.23
COTL1-204ENST00000564662 LMO7Q8WWI1 1683 aa29■■■□□ 2.23
COTL1-204ENST00000564662 ZC3H6P61129 1189 aaKnown RBP29■■■□□ 2.23
COTL1-204ENST00000564662 SRPK2P78362 688 aaKnown RBP29■■■□□ 2.23
COTL1-204ENST00000564662 PLEKHG3A1L390 1219 aa28.99■■■□□ 2.23
COTL1-204ENST00000564662 FAM182BQ5T319 152 aa28.99■■■□□ 2.23
COTL1-204ENST00000564662 STRN4Q9NRL3 753 aa28.99■■■□□ 2.23
COTL1-204ENST00000564662 SPATA31A1Q5TZJ5 1347 aa28.96■■■□□ 2.23
COTL1-204ENST00000564662 BAG6P46379 1132 aa28.96■■■□□ 2.23
COTL1-204ENST00000564662 SRCAPQ6ZRS2 3230 aa28.95■■■□□ 2.23
COTL1-204ENST00000564662 ABTB2Q8N961 1025 aa28.95■■■□□ 2.22
COTL1-204ENST00000564662 CABP2Q9NPB3 220 aa28.95■■■□□ 2.22
COTL1-204ENST00000564662 SSH2Q76I76 1423 aa28.94■■■□□ 2.22
COTL1-204ENST00000564662 CAMTA1Q9Y6Y1 1673 aa28.94■■■□□ 2.22
COTL1-204ENST00000564662 USP19O94966 1318 aa28.94■■■□□ 2.22
COTL1-204ENST00000564662 LRP5O75197 1615 aa28.93■■■□□ 2.22
COTL1-204ENST00000564662 L3MBTL2Q969R5 705 aa28.92■■■□□ 2.22
COTL1-204ENST00000564662 PIK3C2AO00443 1686 aa28.9■■■□□ 2.22
COTL1-204ENST00000564662 USP35Q9P2H5 1018 aa28.9■■■□□ 2.22
COTL1-204ENST00000564662 CPDO75976 1380 aa28.89■■■□□ 2.22
COTL1-204ENST00000564662 USP6P35125 1406 aa28.88■■■□□ 2.21
COTL1-204ENST00000564662 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
COTL1-204ENST00000564662 EVA1CP58658 441 aa28.87■■■□□ 2.21
COTL1-204ENST00000564662 SIN3AQ96ST3 1273 aa28.87■■■□□ 2.21
COTL1-204ENST00000564662 NLRP13Q86W25 1043 aa28.86■■■□□ 2.21
COTL1-204ENST00000564662 DISP2A7MBM2 1401 aa28.86■■■□□ 2.21
COTL1-204ENST00000564662 SLIT3O75094 1523 aa28.85■■■□□ 2.21
COTL1-204ENST00000564662 EN1Q05925 392 aaPredicted RBP28.85■■■□□ 2.21
COTL1-204ENST00000564662 PARP4Q9UKK3 1724 aaKnown RBP28.85■■■□□ 2.21
COTL1-204ENST00000564662 BRD4O60885 1362 aaPredicted RBP28.85■■■□□ 2.21
COTL1-204ENST00000564662 COL5A2P05997 1499 aaPredicted RBP28.85■■■□□ 2.21
COTL1-204ENST00000564662 PSDA5PKW4 1024 aaPredicted RBP28.84■■■□□ 2.21
COTL1-204ENST00000564662 ROCK2O75116 1388 aaKnown RBP28.84■■■□□ 2.21
COTL1-204ENST00000564662 LARP1Q6PKG0 1096 aaKnown RBP28.83■■■□□ 2.21
COTL1-204ENST00000564662 CABP1Q9NZU7 370 aa28.83■■■□□ 2.21
COTL1-204ENST00000564662 GCP02774 474 aa28.82■■■□□ 2.2
COTL1-204ENST00000564662 NEUROD1Q13562 356 aa28.82■■■□□ 2.2
COTL1-204ENST00000564662 WNK3Q9BYP7 1800 aa28.82■■■□□ 2.2
COTL1-204ENST00000564662 EVC2Q86UK5 1308 aa28.81■■■□□ 2.2
COTL1-204ENST00000564662 RREB1Q92766 1687 aa28.8■■■□□ 2.2
COTL1-204ENST00000564662 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
COTL1-204ENST00000564662 BARGINQ6ZT62 677 aa28.8■■■□□ 2.2
COTL1-204ENST00000564662 COL18A1P39060 1754 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 TRIM37O94972 964 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 NLRP6P59044 892 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 FAM196AQ6ZSG2 479 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 TCP11L2Q8N4U5 519 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 LRRC37A3O60309 1634 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 RGPD5Q99666 1765 aa28.78■■■□□ 2.2
COTL1-204ENST00000564662 NUP188Q5SRE5 1749 aa28.77■■■□□ 2.2
COTL1-204ENST00000564662 CRB1P82279 1406 aa28.76■■■□□ 2.19
COTL1-204ENST00000564662 MON2Q7Z3U7 1717 aa28.75■■■□□ 2.19
COTL1-204ENST00000564662 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
COTL1-204ENST00000564662 EZH2Q15910 746 aaKnown RBP28.75■■■□□ 2.19
COTL1-204ENST00000564662 R3HDM1Q15032 1099 aaKnown RBP28.71■■■□□ 2.19
COTL1-204ENST00000564662 THRAP3Q9Y2W1 955 aaKnown RBP28.71■■■□□ 2.19
COTL1-204ENST00000564662 AATKQ6ZMQ8 1374 aa28.71■■■□□ 2.19
COTL1-204ENST00000564662 PEAK1Q9H792 1746 aa28.71■■■□□ 2.19
COTL1-204ENST00000564662 CPSF1Q10570 1443 aaKnown RBP28.7■■■□□ 2.19
COTL1-204ENST00000564662 APBA3O96018 575 aa28.7■■■□□ 2.18
COTL1-204ENST00000564662 SBF2Q86WG5 1849 aa28.7■■■□□ 2.18
COTL1-204ENST00000564662 CAMKK2Q96RR4 588 aa28.68■■■□□ 2.18
COTL1-204ENST00000564662 PARD3Q8TEW0 1356 aa28.67■■■□□ 2.18
COTL1-204ENST00000564662 TTC21BQ7Z4L5 1316 aa28.66■■■□□ 2.18
COTL1-204ENST00000564662 NFAT5O94916 1531 aa28.65■■■□□ 2.18
COTL1-204ENST00000564662 OVOS2A0A0G2JMS6 1433 aa28.64■■■□□ 2.18
COTL1-204ENST00000564662 OVOS2A0A0J9YW53 1432 aa28.64■■■□□ 2.18
COTL1-204ENST00000564662 OVOS2Q6IE36 1432 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms