RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 NPATQ14207 1427 aa9.72□□□□□ -0.85
ATXN3-249ENST00000564606 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 GGT6Q6P531 493 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.86
ATXN3-249ENST00000564606 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 DDX19BQ9UMR2 479 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 TRAK1Q9UPV9 953 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 KIF16BQ96L93 1317 aa9.71□□□□□ -0.86
ATXN3-249ENST00000564606 PPLO60437 1756 aa9.7□□□□□ -0.86
ATXN3-249ENST00000564606 PTMSP20962 102 aa9.7□□□□□ -0.86
ATXN3-249ENST00000564606 TCP11L2Q8N4U5 519 aa9.7□□□□□ -0.86
ATXN3-249ENST00000564606 ABCC3O15438 1527 aa9.7□□□□□ -0.86
ATXN3-249ENST00000564606 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
ATXN3-249ENST00000564606 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
ATXN3-249ENST00000564606 GSE1Q14687 1217 aa9.69□□□□□ -0.86
ATXN3-249ENST00000564606 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
ATXN3-249ENST00000564606 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
ATXN3-249ENST00000564606 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
ATXN3-249ENST00000564606 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-249ENST00000564606 RGS3P49796 1198 aa9.68□□□□□ -0.86
ATXN3-249ENST00000564606 MTHFSP49914 203 aa9.68□□□□□ -0.86
ATXN3-249ENST00000564606 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATXN3-249ENST00000564606 C8orf34Q49A92 452 aa9.68□□□□□ -0.86
ATXN3-249ENST00000564606 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-249ENST00000564606 POGKQ9P215 609 aa9.68□□□□□ -0.86
ATXN3-249ENST00000564606 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
ATXN3-249ENST00000564606 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
ATXN3-249ENST00000564606 L1TD1Q5T7N2 865 aaKnown RBP9.67□□□□□ -0.86
ATXN3-249ENST00000564606 C20orf194Q5TEA3 1177 aa9.67□□□□□ -0.86
ATXN3-249ENST00000564606 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
ATXN3-249ENST00000564606 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-249ENST00000564606 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
ATXN3-249ENST00000564606 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
ATXN3-249ENST00000564606 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
ATXN3-249ENST00000564606 BCAR3O75815 825 aa9.66□□□□□ -0.86
ATXN3-249ENST00000564606 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
ATXN3-249ENST00000564606 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATXN3-249ENST00000564606 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
ATXN3-249ENST00000564606 GLI2P10070 1586 aa9.66□□□□□ -0.86
ATXN3-249ENST00000564606 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
ATXN3-249ENST00000564606 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
ATXN3-249ENST00000564606 FCHSD2O94868 740 aa9.65□□□□□ -0.86
ATXN3-249ENST00000564606 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
ATXN3-249ENST00000564606 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
ATXN3-249ENST00000564606 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
ATXN3-249ENST00000564606 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
ATXN3-249ENST00000564606 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-249ENST00000564606 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-249ENST00000564606 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-249ENST00000564606 COG6Q9Y2V7 657 aa9.64□□□□□ -0.87
ATXN3-249ENST00000564606 PYGBP11216 843 aa9.63□□□□□ -0.87
ATXN3-249ENST00000564606 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATXN3-249ENST00000564606 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
ATXN3-249ENST00000564606 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
ATXN3-249ENST00000564606 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
ATXN3-249ENST00000564606 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
ATXN3-249ENST00000564606 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-249ENST00000564606 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 CHRM1P11229 460 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-249ENST00000564606 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 ARHGAP45Q92619 1136 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 ADGRB2O60241 1585 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 FRMPD1Q5SYB0 1578 aa9.62□□□□□ -0.87
ATXN3-249ENST00000564606 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 ATP7BP35670 1465 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
ATXN3-249ENST00000564606 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
ATXN3-249ENST00000564606 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
ATXN3-249ENST00000564606 GNAI1P63096 354 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 SIRT1Q96EB6 747 aa9.61□□□□□ -0.87
ATXN3-249ENST00000564606 ARHGEF28Q8N1W1 1705 aaKnown RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 DIP2CQ9Y2E4 1556 aa9.6□□□□□ -0.87
ATXN3-249ENST00000564606 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
ATXN3-249ENST00000564606 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
ATXN3-249ENST00000564606 SHPRHQ149N8 1683 aa9.6□□□□□ -0.87
ATXN3-249ENST00000564606 KIF24Q5T7B8 1368 aa9.6□□□□□ -0.87
ATXN3-249ENST00000564606 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 CLTCQ00610 1675 aaKnown RBP9.59□□□□□ -0.87
ATXN3-249ENST00000564606 IDI1Q13907 227 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 PNPLA6Q8IY17 1366 aa9.59□□□□□ -0.87
ATXN3-249ENST00000564606 PPIP5K1Q6PFW1 1433 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 AGLP35573 1532 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 IGHDP01880 384 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 RIPK4P57078 832 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 CHMP4AQ9BY43 222 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 API5Q9BZZ5 524 aaKnown RBP9.58□□□□□ -0.88
ATXN3-249ENST00000564606 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms