RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
LINC01858-201ENST00000564534 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
LINC01858-201ENST00000564534 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
LINC01858-201ENST00000564534 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
LINC01858-201ENST00000564534 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
LINC01858-201ENST00000564534 MSH6P52701 1360 aa12.55□□□□□ -0.4
LINC01858-201ENST00000564534 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
LINC01858-201ENST00000564534 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
LINC01858-201ENST00000564534 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
LINC01858-201ENST00000564534 PYGBP11216 843 aa12.53□□□□□ -0.4
LINC01858-201ENST00000564534 DCCP43146 1447 aa12.53□□□□□ -0.4
LINC01858-201ENST00000564534 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
LINC01858-201ENST00000564534 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
LINC01858-201ENST00000564534 ATF3P18847 181 aa12.53□□□□□ -0.4
LINC01858-201ENST00000564534 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
LINC01858-201ENST00000564534 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
LINC01858-201ENST00000564534 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
LINC01858-201ENST00000564534 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
LINC01858-201ENST00000564534 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
LINC01858-201ENST00000564534 TIE1P35590 1138 aa12.51□□□□□ -0.41
LINC01858-201ENST00000564534 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
LINC01858-201ENST00000564534 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
LINC01858-201ENST00000564534 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
LINC01858-201ENST00000564534 LHX8Q68G74 356 aa12.5□□□□□ -0.41
LINC01858-201ENST00000564534 PUS7Q96PZ0 661 aaKnown RBP12.5□□□□□ -0.41
LINC01858-201ENST00000564534 ATAD2Q6PL18 1390 aa12.5□□□□□ -0.41
LINC01858-201ENST00000564534 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
LINC01858-201ENST00000564534 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
LINC01858-201ENST00000564534 FMN2Q9NZ56 1722 aa12.49□□□□□ -0.41
LINC01858-201ENST00000564534 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
LINC01858-201ENST00000564534 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
LINC01858-201ENST00000564534 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
LINC01858-201ENST00000564534 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
LINC01858-201ENST00000564534 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
LINC01858-201ENST00000564534 KIF7Q2M1P5 1343 aa12.47□□□□□ -0.41
LINC01858-201ENST00000564534 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
LINC01858-201ENST00000564534 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
LINC01858-201ENST00000564534 BMP2KQ9NSY1 1161 aaPredicted RBP12.47□□□□□ -0.41
LINC01858-201ENST00000564534 ATP7BP35670 1465 aa12.46□□□□□ -0.41
LINC01858-201ENST00000564534 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
LINC01858-201ENST00000564534 C11orf95C9JLR9 678 aaPredicted RBP12.46□□□□□ -0.41
LINC01858-201ENST00000564534 NUDT16Q96DE0 195 aaKnown RBP12.46□□□□□ -0.41
LINC01858-201ENST00000564534 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
LINC01858-201ENST00000564534 MST1RQ04912 1400 aa12.46□□□□□ -0.42
LINC01858-201ENST00000564534 ITSN1Q15811 1721 aa12.46□□□□□ -0.42
LINC01858-201ENST00000564534 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
LINC01858-201ENST00000564534 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
LINC01858-201ENST00000564534 C1orf167Q5SNV9 1468 aa12.45□□□□□ -0.42
LINC01858-201ENST00000564534 PRR36Q9H6K5 1346 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 TOM1O60784 492 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
LINC01858-201ENST00000564534 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 SLAIN2Q9P270 581 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
LINC01858-201ENST00000564534 C7P10643 843 aa12.43□□□□□ -0.42
LINC01858-201ENST00000564534 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
LINC01858-201ENST00000564534 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
LINC01858-201ENST00000564534 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
LINC01858-201ENST00000564534 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
LINC01858-201ENST00000564534 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
LINC01858-201ENST00000564534 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
LINC01858-201ENST00000564534 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
LINC01858-201ENST00000564534 MYOM1P52179 1685 aa12.4□□□□□ -0.42
LINC01858-201ENST00000564534 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
LINC01858-201ENST00000564534 ORAI2Q96SN7 254 aa12.4□□□□□ -0.42
LINC01858-201ENST00000564534 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
LINC01858-201ENST00000564534 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
LINC01858-201ENST00000564534 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
LINC01858-201ENST00000564534 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
LINC01858-201ENST00000564534 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
LINC01858-201ENST00000564534 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
LINC01858-201ENST00000564534 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
LINC01858-201ENST00000564534 PCDHB8Q9UN66 801 aa12.38□□□□□ -0.43
LINC01858-201ENST00000564534 ACEP12821 1306 aa12.38□□□□□ -0.43
LINC01858-201ENST00000564534 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
LINC01858-201ENST00000564534 A0A1W2PP64 1363 aa12.37□□□□□ -0.43
LINC01858-201ENST00000564534 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
LINC01858-201ENST00000564534 PANK3Q9H999 370 aa12.37□□□□□ -0.43
LINC01858-201ENST00000564534 CPSF1Q10570 1443 aaKnown RBP12.36□□□□□ -0.43
LINC01858-201ENST00000564534 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
LINC01858-201ENST00000564534 FOXO3O43524 673 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 PSME1Q06323 249 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
LINC01858-201ENST00000564534 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
LINC01858-201ENST00000564534 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
LINC01858-201ENST00000564534 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
LINC01858-201ENST00000564534 USP6P35125 1406 aa12.34□□□□□ -0.43
LINC01858-201ENST00000564534 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
LINC01858-201ENST00000564534 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
LINC01858-201ENST00000564534 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms