RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 UBAP1LF5GYI3 381 aa25.36■■□□□ 1.65
VAC14-205ENST00000564512 PER1O15534 1290 aaPredicted RBP25.36■■□□□ 1.65
VAC14-205ENST00000564512 NGDNQ8NEJ9 315 aaKnown RBP25.36■■□□□ 1.65
VAC14-205ENST00000564512 ABCA3Q99758 1704 aa25.34■■□□□ 1.65
VAC14-205ENST00000564512 MED1Q15648 1581 aaPredicted RBP25.34■■□□□ 1.65
VAC14-205ENST00000564512 NPC1L1Q9UHC9 1359 aa25.33■■□□□ 1.65
VAC14-205ENST00000564512 SBNO1A3KN83 1393 aa25.32■■□□□ 1.64
VAC14-205ENST00000564512 FOXO3O43524 673 aa25.32■■□□□ 1.64
VAC14-205ENST00000564512 COL22A1Q8NFW1 1626 aaPredicted RBP25.32■■□□□ 1.64
VAC14-205ENST00000564512 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
VAC14-205ENST00000564512 PHRF1Q9P1Y6 1649 aaKnown RBP25.31■■□□□ 1.64
VAC14-205ENST00000564512 TTC21AQ8NDW8 1320 aa25.31■■□□□ 1.64
VAC14-205ENST00000564512 NSD2O96028 1365 aa25.31■■□□□ 1.64
VAC14-205ENST00000564512 TNS3Q68CZ2 1445 aa25.3■■□□□ 1.64
VAC14-205ENST00000564512 TTC21BQ7Z4L5 1316 aa25.3■■□□□ 1.64
VAC14-205ENST00000564512 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
VAC14-205ENST00000564512 OVOS2A0A0J9YW53 1432 aa25.29■■□□□ 1.64
VAC14-205ENST00000564512 OVOS2Q6IE36 1432 aa25.29■■□□□ 1.64
VAC14-205ENST00000564512 PSME1Q06323 249 aa25.27■■□□□ 1.64
VAC14-205ENST00000564512 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
VAC14-205ENST00000564512 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
VAC14-205ENST00000564512 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
VAC14-205ENST00000564512 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
VAC14-205ENST00000564512 USP31Q70CQ4 1352 aa25.26■■□□□ 1.63
VAC14-205ENST00000564512 SLIT3O75094 1523 aa25.26■■□□□ 1.63
VAC14-205ENST00000564512 DDX17Q92841 729 aaKnown RBP25.25■■□□□ 1.63
VAC14-205ENST00000564512 PIP4K2BP78356 416 aa25.23■■□□□ 1.63
VAC14-205ENST00000564512 SPATA31A3Q5VYP0 1347 aa25.22■■□□□ 1.63
VAC14-205ENST00000564512 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
VAC14-205ENST00000564512 ARHGEF10O15013 1369 aa25.21■■□□□ 1.63
VAC14-205ENST00000564512 FYB1O15117 783 aa25.2■■□□□ 1.62
VAC14-205ENST00000564512 PARD3Q8TEW0 1356 aa25.19■■□□□ 1.62
VAC14-205ENST00000564512 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
VAC14-205ENST00000564512 LTN1O94822 1766 aa25.19■■□□□ 1.62
VAC14-205ENST00000564512 NME9Q86XW9 330 aa25.19■■□□□ 1.62
VAC14-205ENST00000564512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.19■■□□□ 1.62
VAC14-205ENST00000564512 NFAT5O94916 1531 aa25.18■■□□□ 1.62
VAC14-205ENST00000564512 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
VAC14-205ENST00000564512 USP19O94966 1318 aa25.16■■□□□ 1.62
VAC14-205ENST00000564512 PAK3O75914 559 aaPredicted RBP25.14■■□□□ 1.62
VAC14-205ENST00000564512 PNPLA6Q8IY17 1366 aa25.14■■□□□ 1.61
VAC14-205ENST00000564512 DIEXFQ68CQ4 756 aaKnown RBP25.13■■□□□ 1.61
VAC14-205ENST00000564512 ABTB2Q8N961 1025 aa25.13■■□□□ 1.61
VAC14-205ENST00000564512 GGNBP2Q9H3C7 697 aa25.13■■□□□ 1.61
VAC14-205ENST00000564512 LRRC59Q96AG4 307 aaKnown RBP25.12■■□□□ 1.61
VAC14-205ENST00000564512 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
VAC14-205ENST00000564512 SMG6Q86US8 1419 aaKnown RBP25.11■■□□□ 1.61
VAC14-205ENST00000564512 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
VAC14-205ENST00000564512 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
VAC14-205ENST00000564512 AATKQ6ZMQ8 1374 aa25.09■■□□□ 1.61
VAC14-205ENST00000564512 ABCC6O95255 1503 aa25.09■■□□□ 1.61
VAC14-205ENST00000564512 NLRP13Q86W25 1043 aa25.09■■□□□ 1.61
VAC14-205ENST00000564512 COG3Q96JB2 828 aa25.09■■□□□ 1.61
VAC14-205ENST00000564512 NLRP6P59044 892 aa25.08■■□□□ 1.61
VAC14-205ENST00000564512 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.61
VAC14-205ENST00000564512 FBXO41Q8TF61 875 aa25.07■■□□□ 1.6
VAC14-205ENST00000564512 COL18A1P39060 1754 aa25.07■■□□□ 1.6
VAC14-205ENST00000564512 JCADQ9P266 1359 aa25.06■■□□□ 1.6
VAC14-205ENST00000564512 RALBP1Q15311 655 aa25.06■■□□□ 1.6
VAC14-205ENST00000564512 HSPA1LP34931 641 aa25.04■■□□□ 1.6
VAC14-205ENST00000564512 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
VAC14-205ENST00000564512 MORC1Q86VD1 984 aa25.04■■□□□ 1.6
VAC14-205ENST00000564512 LMO7Q8WWI1 1683 aa25.04■■□□□ 1.6
VAC14-205ENST00000564512 RGPD5Q99666 1765 aa25.03■■□□□ 1.6
VAC14-205ENST00000564512 ANP32CO43423 234 aa25.02■■□□□ 1.6
VAC14-205ENST00000564512 LMOD2Q6P5Q4 547 aa25.02■■□□□ 1.6
VAC14-205ENST00000564512 CDK12Q9NYV4 1490 aaPredicted RBP25.02■■□□□ 1.6
VAC14-205ENST00000564512 KCNH5Q8NCM2 988 aa25.01■■□□□ 1.59
VAC14-205ENST00000564512 PLCH1Q4KWH8 1693 aa25.01■■□□□ 1.59
VAC14-205ENST00000564512 COL14A1Q05707 1796 aaKnown RBP25■■□□□ 1.59
VAC14-205ENST00000564512 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
VAC14-205ENST00000564512 CPDO75976 1380 aa25■■□□□ 1.59
VAC14-205ENST00000564512 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
VAC14-205ENST00000564512 RTL1A6NKG5 1358 aa24.98■■□□□ 1.59
VAC14-205ENST00000564512 GCP02774 474 aa24.98■■□□□ 1.59
VAC14-205ENST00000564512 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
VAC14-205ENST00000564512 COL3A1P02461 1466 aaPredicted RBP24.97■■□□□ 1.59
VAC14-205ENST00000564512 NWD2Q9ULI1 1742 aa24.97■■□□□ 1.59
VAC14-205ENST00000564512 PPP2R1AP30153 589 aa24.96■■□□□ 1.59
VAC14-205ENST00000564512 NRAPQ86VF7 1730 aa24.95■■□□□ 1.59
VAC14-205ENST00000564512 LRP6O75581 1613 aa24.95■■□□□ 1.58
VAC14-205ENST00000564512 CNGB1Q14028 1251 aaPredicted RBP24.95■■□□□ 1.58
VAC14-205ENST00000564512 SPATA31A6Q5VVP1 1343 aa24.94■■□□□ 1.58
VAC14-205ENST00000564512 CABLES1Q8TDN4 633 aa24.94■■□□□ 1.58
VAC14-205ENST00000564512 MAP3K19Q56UN5 1328 aa24.93■■□□□ 1.58
VAC14-205ENST00000564512 RGPD1P0DJD0 1748 aa24.93■■□□□ 1.58
VAC14-205ENST00000564512 CAMTA1Q9Y6Y1 1673 aa24.93■■□□□ 1.58
VAC14-205ENST00000564512 INSRP06213 1382 aa24.93■■□□□ 1.58
VAC14-205ENST00000564512 POLKQ9UBT6 870 aa24.92■■□□□ 1.58
VAC14-205ENST00000564512 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
VAC14-205ENST00000564512 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
VAC14-205ENST00000564512 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.91■■□□□ 1.58
VAC14-205ENST00000564512 FLT4P35916 1363 aa24.91■■□□□ 1.58
VAC14-205ENST00000564512 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
VAC14-205ENST00000564512 BLMP54132 1417 aaPredicted RBP24.9■■□□□ 1.58
VAC14-205ENST00000564512 FBLN1P23142 703 aa24.9■■□□□ 1.58
VAC14-205ENST00000564512 RRS1Q15050 365 aaKnown RBP24.89■■□□□ 1.58
VAC14-205ENST00000564512 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
VAC14-205ENST00000564512 RGPD2P0DJD1 1756 aa24.88■■□□□ 1.57
VAC14-205ENST00000564512 SOX12O15370 315 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms