RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
TCF4-224ENST00000564403 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
TCF4-224ENST00000564403 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
TCF4-224ENST00000564403 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 RGS3P49796 1198 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
TCF4-224ENST00000564403 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 PATL2C9JE40 543 aaKnown RBP11.81□□□□□ -0.52
TCF4-224ENST00000564403 MTHFSP49914 203 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 NPC1L1Q9UHC9 1359 aa11.81□□□□□ -0.52
TCF4-224ENST00000564403 FBLN1P23142 703 aa11.8□□□□□ -0.52
TCF4-224ENST00000564403 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
TCF4-224ENST00000564403 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
TCF4-224ENST00000564403 EXOC6Q8TAG9 804 aa11.8□□□□□ -0.52
TCF4-224ENST00000564403 ARID3AQ99856 593 aa11.8□□□□□ -0.52
TCF4-224ENST00000564403 ZFYVE9O95405 1425 aa11.8□□□□□ -0.52
TCF4-224ENST00000564403 A2ML1A8K2U0 1454 aa11.8□□□□□ -0.52
TCF4-224ENST00000564403 PTMSP20962 102 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
TCF4-224ENST00000564403 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 CDK19Q9BWU1 502 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 AGLP35573 1532 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 MCCP23508 829 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 ZNF830Q96NB3 372 aaPredicted RBP11.79□□□□□ -0.52
TCF4-224ENST00000564403 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
TCF4-224ENST00000564403 RRP7AQ9Y3A4 280 aaKnown RBP11.79□□□□□ -0.52
TCF4-224ENST00000564403 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
TCF4-224ENST00000564403 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
TCF4-224ENST00000564403 CGNL1Q0VF96 1302 aa11.78□□□□□ -0.52
TCF4-224ENST00000564403 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
TCF4-224ENST00000564403 PTPRMP28827 1452 aa11.78□□□□□ -0.52
TCF4-224ENST00000564403 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.52
TCF4-224ENST00000564403 A0A1W2PP64 1363 aa11.77□□□□□ -0.52
TCF4-224ENST00000564403 ALKQ9UM73 1620 aa11.77□□□□□ -0.53
TCF4-224ENST00000564403 METP08581 1390 aa11.77□□□□□ -0.53
TCF4-224ENST00000564403 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
TCF4-224ENST00000564403 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
TCF4-224ENST00000564403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.75□□□□□ -0.53
TCF4-224ENST00000564403 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 FYB1O15117 783 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 ZNF521Q96K83 1311 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
TCF4-224ENST00000564403 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
TCF4-224ENST00000564403 NEFMP07197 916 aa11.74□□□□□ -0.53
TCF4-224ENST00000564403 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
TCF4-224ENST00000564403 LTKP29376 864 aa11.73□□□□□ -0.53
TCF4-224ENST00000564403 NBR1Q14596 966 aa11.73□□□□□ -0.53
TCF4-224ENST00000564403 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
TCF4-224ENST00000564403 SLC26A8Q96RN1 970 aa11.73□□□□□ -0.53
TCF4-224ENST00000564403 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
TCF4-224ENST00000564403 TNRQ92752 1358 aa11.72□□□□□ -0.53
TCF4-224ENST00000564403 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
TCF4-224ENST00000564403 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
TCF4-224ENST00000564403 CLGNO14967 610 aa11.72□□□□□ -0.53
TCF4-224ENST00000564403 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
TCF4-224ENST00000564403 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
TCF4-224ENST00000564403 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
TCF4-224ENST00000564403 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
TCF4-224ENST00000564403 SKAP1Q86WV1 359 aa11.72□□□□□ -0.53
TCF4-224ENST00000564403 INSRP06213 1382 aa11.71□□□□□ -0.53
TCF4-224ENST00000564403 TCP11L2Q8N4U5 519 aa11.71□□□□□ -0.53
TCF4-224ENST00000564403 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
TCF4-224ENST00000564403 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
TCF4-224ENST00000564403 CRBNQ96SW2 442 aa11.71□□□□□ -0.54
TCF4-224ENST00000564403 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.54
TCF4-224ENST00000564403 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
TCF4-224ENST00000564403 BCAR3O75815 825 aa11.7□□□□□ -0.54
TCF4-224ENST00000564403 ZNF428Q96B54 188 aa11.7□□□□□ -0.54
TCF4-224ENST00000564403 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
TCF4-224ENST00000564403 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
TCF4-224ENST00000564403 ATAD2Q6PL18 1390 aa11.69□□□□□ -0.54
TCF4-224ENST00000564403 ANAPC15P60006 121 aa11.69□□□□□ -0.54
TCF4-224ENST00000564403 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
TCF4-224ENST00000564403 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
TCF4-224ENST00000564403 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
TCF4-224ENST00000564403 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
TCF4-224ENST00000564403 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
TCF4-224ENST00000564403 TMEM2Q9UHN6 1383 aa11.68□□□□□ -0.54
TCF4-224ENST00000564403 TRMT2AQ8IZ69 625 aaKnown RBP11.67□□□□□ -0.54
TCF4-224ENST00000564403 NME9Q86XW9 330 aa11.67□□□□□ -0.54
TCF4-224ENST00000564403 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
TCF4-224ENST00000564403 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■■□□ 17.7
TCF4-224ENST00000564403 NUDT16Q96DE0 195 aaKnown RBP11.66□□□□□ -0.54
TCF4-224ENST00000564403 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
TCF4-224ENST00000564403 NRXN3Q9Y4C0 1643 aa11.66□□□□□ -0.54
TCF4-224ENST00000564403 ROBO2Q9HCK4 1378 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 SOX12O15370 315 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 GPATCH11Q8N954 259 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
TCF4-224ENST00000564403 TMEM51Q9NW97 253 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 MMP14P50281 582 aa11.65□□□□□ -0.54
TCF4-224ENST00000564403 SHPRHQ149N8 1683 aa11.65□□□□□ -0.55
TCF4-224ENST00000564403 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms