RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 MFRPQ9BY79 579 aa9.56□□□□□ -0.88
HERC2-205ENST00000564383 SLC52A1Q9NWF4 448 aa9.56□□□□□ -0.88
HERC2-205ENST00000564383 ZMYM3Q14202 1370 aa9.55□□□□□ -0.88
HERC2-205ENST00000564383 CCDC7Q96M83 1385 aa9.55□□□□□ -0.88
HERC2-205ENST00000564383 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
HERC2-205ENST00000564383 KIF7Q2M1P5 1343 aa9.55□□□□□ -0.88
HERC2-205ENST00000564383 ARID4BQ4LE39 1312 aaPredicted RBP9.55□□□□□ -0.88
HERC2-205ENST00000564383 SPATA31D1Q6ZQQ2 1576 aa9.54□□□□□ -0.88
HERC2-205ENST00000564383 ST20-MTHFSA0A0A6YYL1 179 aa9.54□□□□□ -0.88
HERC2-205ENST00000564383 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
HERC2-205ENST00000564383 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
HERC2-205ENST00000564383 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
HERC2-205ENST00000564383 CLTCQ00610 1675 aaKnown RBP9.53□□□□□ -0.88
HERC2-205ENST00000564383 RGS20O76081 388 aa9.53□□□□□ -0.88
HERC2-205ENST00000564383 PSEN2P49810 448 aa9.53□□□□□ -0.88
HERC2-205ENST00000564383 CFAP70Q5T0N1 1121 aa9.53□□□□□ -0.88
HERC2-205ENST00000564383 LAMC1P11047 1609 aa9.53□□□□□ -0.88
HERC2-205ENST00000564383 PIK3C2GO75747 1445 aa9.52□□□□□ -0.89
HERC2-205ENST00000564383 TESK2Q96S53 571 aa9.52□□□□□ -0.89
HERC2-205ENST00000564383 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
HERC2-205ENST00000564383 IFT172Q9UG01 1749 aa9.51□□□□□ -0.89
HERC2-205ENST00000564383 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
HERC2-205ENST00000564383 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
HERC2-205ENST00000564383 TMEM131LA2VDJ0 1609 aa9.51□□□□□ -0.89
HERC2-205ENST00000564383 ZFYVE9O95405 1425 aa9.5□□□□□ -0.89
HERC2-205ENST00000564383 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
HERC2-205ENST00000564383 IRX2Q9BZI1 471 aaPredicted RBP9.5□□□□□ -0.89
HERC2-205ENST00000564383 C14orf93Q9H972 538 aaKnown RBP9.5□□□□□ -0.89
HERC2-205ENST00000564383 A2ML1A8K2U0 1454 aa9.5□□□□□ -0.89
HERC2-205ENST00000564383 SCAF11Q99590 1463 aaKnown RBP9.49□□□□□ -0.89
HERC2-205ENST00000564383 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
HERC2-205ENST00000564383 KIF1BO60333 1816 aa9.49□□□□□ -0.89
HERC2-205ENST00000564383 TNRQ92752 1358 aa9.49□□□□□ -0.89
HERC2-205ENST00000564383 CEBPAP49715 358 aaPredicted RBP9.48□□□□□ -0.89
HERC2-205ENST00000564383 IFFO2Q5TF58 517 aa9.48□□□□□ -0.89
HERC2-205ENST00000564383 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
HERC2-205ENST00000564383 ADGRB1O14514 1584 aa9.48□□□□□ -0.89
HERC2-205ENST00000564383 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
HERC2-205ENST00000564383 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
HERC2-205ENST00000564383 PPLO60437 1756 aa9.47□□□□□ -0.89
HERC2-205ENST00000564383 IQGAP1P46940 1657 aa9.46□□□□□ -0.89
HERC2-205ENST00000564383 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.89
HERC2-205ENST00000564383 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.9
HERC2-205ENST00000564383 CFAP65Q6ZU64 1925 aaKnown RBP9.45□□□□□ -0.9
HERC2-205ENST00000564383 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
HERC2-205ENST00000564383 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
HERC2-205ENST00000564383 PTCD2Q8WV60 388 aaKnown RBP9.45□□□□□ -0.9
HERC2-205ENST00000564383 RIMS2Q9UQ26 1411 aa9.45□□□□□ -0.9
HERC2-205ENST00000564383 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
HERC2-205ENST00000564383 PTPN5P54829 565 aa9.44□□□□□ -0.9
HERC2-205ENST00000564383 PTPRMP28827 1452 aa9.42□□□□□ -0.9
HERC2-205ENST00000564383 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
HERC2-205ENST00000564383 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
HERC2-205ENST00000564383 A0A0G2JS52 829 aa9.42□□□□□ -0.9
HERC2-205ENST00000564383 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
HERC2-205ENST00000564383 EIF3AQ14152 1382 aaKnown RBP9.41□□□□□ -0.9
HERC2-205ENST00000564383 STK25O00506 426 aa9.41□□□□□ -0.9
HERC2-205ENST00000564383 ANP32CO43423 234 aa9.41□□□□□ -0.9
HERC2-205ENST00000564383 TMF1P82094 1093 aa9.41□□□□□ -0.9
HERC2-205ENST00000564383 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
HERC2-205ENST00000564383 C3P01024 1663 aa9.41□□□□□ -0.9
HERC2-205ENST00000564383 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
HERC2-205ENST00000564383 POLR1AO95602 1720 aaPredicted RBP9.4□□□□□ -0.9
HERC2-205ENST00000564383 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
HERC2-205ENST00000564383 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
HERC2-205ENST00000564383 MYO5BQ9ULV0 1848 aa9.4□□□□□ -0.91
HERC2-205ENST00000564383 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
HERC2-205ENST00000564383 ALKQ9UM73 1620 aa9.39□□□□□ -0.91
HERC2-205ENST00000564383 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
HERC2-205ENST00000564383 CCER2I3L3R5 266 aa9.39□□□□□ -0.91
HERC2-205ENST00000564383 LTKP29376 864 aa9.39□□□□□ -0.91
HERC2-205ENST00000564383 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
HERC2-205ENST00000564383 PRKRIP1Q9H875 184 aaPredicted RBP9.39□□□□□ -0.91
HERC2-205ENST00000564383 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
HERC2-205ENST00000564383 MYO3AQ8NEV4 1616 aa9.38□□□□□ -0.91
HERC2-205ENST00000564383 PER1O15534 1290 aaPredicted RBP9.38□□□□□ -0.91
HERC2-205ENST00000564383 UBR1Q8IWV7 1749 aa9.38□□□□□ -0.91
HERC2-205ENST00000564383 ARHGAP23Q9P227 1491 aa9.38□□□□□ -0.91
HERC2-205ENST00000564383 YTHDC2Q9H6S0 1430 aaKnown RBP9.38□□□□□ -0.91
HERC2-205ENST00000564383 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
HERC2-205ENST00000564383 METP08581 1390 aa9.37□□□□□ -0.91
HERC2-205ENST00000564383 KDM5AP29375 1690 aaKnown RBP9.37□□□□□ -0.91
HERC2-205ENST00000564383 CCDC184Q52MB2 194 aa9.37□□□□□ -0.91
HERC2-205ENST00000564383 STK26Q9P289 416 aa9.37□□□□□ -0.91
HERC2-205ENST00000564383 ADAMTS13Q76LX8 1427 aa9.37□□□□□ -0.91
HERC2-205ENST00000564383 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
HERC2-205ENST00000564383 SLIT1O75093 1534 aa9.36□□□□□ -0.91
HERC2-205ENST00000564383 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
HERC2-205ENST00000564383 YTHDC1Q96MU7 727 aaKnown RBP9.36□□□□□ -0.91
HERC2-205ENST00000564383 PANK3Q9H999 370 aa9.36□□□□□ -0.91
HERC2-205ENST00000564383 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
HERC2-205ENST00000564383 MED14O60244 1454 aa9.35□□□□□ -0.91
HERC2-205ENST00000564383 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
HERC2-205ENST00000564383 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
HERC2-205ENST00000564383 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
HERC2-205ENST00000564383 TULP4Q9NRJ4 1543 aa9.35□□□□□ -0.91
HERC2-205ENST00000564383 ABCC11Q96J66 1382 aa9.35□□□□□ -0.91
HERC2-205ENST00000564383 HDGFP51858 240 aaKnown RBP9.34□□□□□ -0.91
HERC2-205ENST00000564383 FOXK1P85037 733 aa9.34□□□□□ -0.91
HERC2-205ENST00000564383 CDCA8Q53HL2 280 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms