RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 ABTB2Q8N961 1025 aa27.18■■□□□ 1.94
CBFB-204ENST00000563939 BCL9LQ86UU0 1499 aa27.18■■□□□ 1.94
CBFB-204ENST00000563939 TRPM3Q9HCF6 1732 aaPredicted RBP27.17■■□□□ 1.94
CBFB-204ENST00000563939 CCER1Q8TC90 406 aaPredicted RBP27.16■■□□□ 1.94
CBFB-204ENST00000563939 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
CBFB-204ENST00000563939 GJD4Q96KN9 370 aaPredicted RBP27.14■■□□□ 1.94
CBFB-204ENST00000563939 ATRNO75882 1429 aa27.14■■□□□ 1.93
CBFB-204ENST00000563939 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
CBFB-204ENST00000563939 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
CBFB-204ENST00000563939 TOPAZ1Q8N9V7 1692 aa27.12■■□□□ 1.93
CBFB-204ENST00000563939 CCDC9Q9Y3X0 531 aaKnown RBP27.12■■□□□ 1.93
CBFB-204ENST00000563939 MARF1Q9Y4F3 1742 aaKnown RBP27.12■■□□□ 1.93
CBFB-204ENST00000563939 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
CBFB-204ENST00000563939 SLIT2O94813 1529 aa27.11■■□□□ 1.93
CBFB-204ENST00000563939 PRDM11Q9NQV5 511 aa27.1■■□□□ 1.93
CBFB-204ENST00000563939 ST20-MTHFSA0A0A6YYL1 179 aa27.09■■□□□ 1.93
CBFB-204ENST00000563939 ZC3H6P61129 1189 aaKnown RBP27.09■■□□□ 1.93
CBFB-204ENST00000563939 NLRP13Q86W25 1043 aa27.09■■□□□ 1.93
CBFB-204ENST00000563939 ZNF692Q9BU19 519 aaPredicted RBP27.09■■□□□ 1.93
CBFB-204ENST00000563939 BTG4Q9NY30 223 aa27.09■■□□□ 1.93
CBFB-204ENST00000563939 ATAD2Q6PL18 1390 aa27.09■■□□□ 1.93
CBFB-204ENST00000563939 SBNO2Q9Y2G9 1366 aa27.08■■□□□ 1.93
CBFB-204ENST00000563939 RGS12O14924 1447 aa27.07■■□□□ 1.92
CBFB-204ENST00000563939 TMC1Q8TDI8 760 aa27.07■■□□□ 1.92
CBFB-204ENST00000563939 VPS72Q15906 364 aa27.06■■□□□ 1.92
CBFB-204ENST00000563939 NLRP6P59044 892 aa27.05■■□□□ 1.92
CBFB-204ENST00000563939 BRD4O60885 1362 aaPredicted RBP27.05■■□□□ 1.92
CBFB-204ENST00000563939 CHRNA2Q15822 529 aa27.04■■□□□ 1.92
CBFB-204ENST00000563939 USP6P35125 1406 aa27.04■■□□□ 1.92
CBFB-204ENST00000563939 KIAA0232Q92628 1395 aa27.03■■□□□ 1.92
CBFB-204ENST00000563939 UPF1Q92900 1129 aaKnown RBP eCLIP27.03■■□□□ 1.92
CBFB-204ENST00000563939 ABCA3Q99758 1704 aa27.02■■□□□ 1.92
CBFB-204ENST00000563939 SLC24A1O60721 1099 aa27.01■■□□□ 1.91
CBFB-204ENST00000563939 GCP02774 474 aa27■■□□□ 1.91
CBFB-204ENST00000563939 TESK2Q96S53 571 aa27■■□□□ 1.91
CBFB-204ENST00000563939 SLC12A5Q9H2X9 1139 aa27■■□□□ 1.91
CBFB-204ENST00000563939 KTN1Q86UP2 1357 aaKnown RBP26.99■■□□□ 1.91
CBFB-204ENST00000563939 TTC21BQ7Z4L5 1316 aa26.99■■□□□ 1.91
CBFB-204ENST00000563939 USP19O94966 1318 aa26.97■■□□□ 1.91
CBFB-204ENST00000563939 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
CBFB-204ENST00000563939 EVA1CP58658 441 aa26.97■■□□□ 1.91
CBFB-204ENST00000563939 HDGFL2Q7Z4V5 671 aaPredicted RBP26.97■■□□□ 1.91
CBFB-204ENST00000563939 PUS7Q96PZ0 661 aaKnown RBP26.97■■□□□ 1.91
CBFB-204ENST00000563939 STRN4Q9NRL3 753 aa26.97■■□□□ 1.91
CBFB-204ENST00000563939 USP47Q96K76 1375 aa26.97■■□□□ 1.91
CBFB-204ENST00000563939 A0A0G2JS52 829 aa26.96■■□□□ 1.91
CBFB-204ENST00000563939 MYT1Q01538 1121 aa26.96■■□□□ 1.91
CBFB-204ENST00000563939 PLCH1Q4KWH8 1693 aa26.95■■□□□ 1.91
CBFB-204ENST00000563939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.95■■□□□ 1.9
CBFB-204ENST00000563939 SEPT12Q8IYM1 358 aa26.95■■□□□ 1.9
CBFB-204ENST00000563939 SSH2Q76I76 1423 aa26.95■■□□□ 1.9
CBFB-204ENST00000563939 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.95■■□□□ 1.9
CBFB-204ENST00000563939 COL14A1Q05707 1796 aaKnown RBP26.94■■□□□ 1.9
CBFB-204ENST00000563939 CPSF1Q10570 1443 aaKnown RBP26.94■■□□□ 1.9
CBFB-204ENST00000563939 TERF2IPQ9NYB0 399 aa26.94■■□□□ 1.9
CBFB-204ENST00000563939 NWD2Q9ULI1 1742 aa26.93■■□□□ 1.9
CBFB-204ENST00000563939 TTC21AQ8NDW8 1320 aa26.93■■□□□ 1.9
CBFB-204ENST00000563939 TMF1P82094 1093 aa26.93■■□□□ 1.9
CBFB-204ENST00000563939 FAM98CQ17RN3 349 aaKnown RBP26.92■■□□□ 1.9
CBFB-204ENST00000563939 CRYBG1Q9Y4K1 1723 aa26.92■■□□□ 1.9
CBFB-204ENST00000563939 GLI3P10071 1580 aa26.92■■□□□ 1.9
CBFB-204ENST00000563939 SOX12O15370 315 aa26.91■■□□□ 1.9
CBFB-204ENST00000563939 ONECUT3O60422 494 aaPredicted RBP26.91■■□□□ 1.9
CBFB-204ENST00000563939 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
CBFB-204ENST00000563939 SPATA31A5Q5VU36 1347 aa26.9■■□□□ 1.9
CBFB-204ENST00000563939 SPATA31A7Q8IWB4 1347 aa26.9■■□□□ 1.9
CBFB-204ENST00000563939 CPDO75976 1380 aa26.89■■□□□ 1.9
CBFB-204ENST00000563939 KCNH5Q8NCM2 988 aa26.87■■□□□ 1.89
CBFB-204ENST00000563939 USP35Q9P2H5 1018 aa26.87■■□□□ 1.89
CBFB-204ENST00000563939 ZRANB1Q9UGI0 708 aa26.87■■□□□ 1.89
CBFB-204ENST00000563939 NME9Q86XW9 330 aa26.86■■□□□ 1.89
CBFB-204ENST00000563939 CDCA8Q53HL2 280 aa26.85■■□□□ 1.89
CBFB-204ENST00000563939 NRKQ7Z2Y5 1582 aa26.84■■□□□ 1.89
CBFB-204ENST00000563939 LARP1Q6PKG0 1096 aaKnown RBP26.84■■□□□ 1.89
CBFB-204ENST00000563939 KRT27Q7Z3Y8 459 aa26.84■■□□□ 1.89
CBFB-204ENST00000563939 CD163L1Q9NR16 1453 aa26.84■■□□□ 1.89
CBFB-204ENST00000563939 SPATA31A1Q5TZJ5 1347 aa26.84■■□□□ 1.89
CBFB-204ENST00000563939 AKAP12Q02952 1782 aa26.84■■□□□ 1.89
CBFB-204ENST00000563939 NRAPQ86VF7 1730 aa26.83■■□□□ 1.89
CBFB-204ENST00000563939 A0A1W2PP64 1363 aa26.82■■□□□ 1.88
CBFB-204ENST00000563939 NINLQ9Y2I6 1382 aa26.82■■□□□ 1.88
CBFB-204ENST00000563939 PIK3C2AO00443 1686 aa26.81■■□□□ 1.88
CBFB-204ENST00000563939 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
CBFB-204ENST00000563939 ARHGEF25Q86VW2 580 aa26.8■■□□□ 1.88
CBFB-204ENST00000563939 AATKQ6ZMQ8 1374 aa26.8■■□□□ 1.88
CBFB-204ENST00000563939 EDC4Q6P2E9 1401 aaKnown RBP26.8■■□□□ 1.88
CBFB-204ENST00000563939 SLIT3O75094 1523 aa26.79■■□□□ 1.88
CBFB-204ENST00000563939 CCDC125Q86Z20 511 aa26.78■■□□□ 1.88
CBFB-204ENST00000563939 USP31Q70CQ4 1352 aa26.77■■□□□ 1.88
CBFB-204ENST00000563939 AXIN2Q9Y2T1 843 aa26.77■■□□□ 1.88
CBFB-204ENST00000563939 EIF4G2P78344 907 aaKnown RBP eCLIP26.76■■□□□ 1.87
CBFB-204ENST00000563939 TCP11L2Q8N4U5 519 aa26.76■■□□□ 1.87
CBFB-204ENST00000563939 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
CBFB-204ENST00000563939 TOM1L2Q6ZVM7 507 aa26.74■■□□□ 1.87
CBFB-204ENST00000563939 POLR3GLQ9BT43 218 aa26.74■■□□□ 1.87
CBFB-204ENST00000563939 CSB-PGBD3P0DP91 1061 aa26.73■■□□□ 1.87
CBFB-204ENST00000563939 BARGINQ6ZT62 677 aa26.73■■□□□ 1.87
CBFB-204ENST00000563939 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
CBFB-204ENST00000563939 FAM182BQ5T319 152 aa26.72■■□□□ 1.87
CBFB-204ENST00000563939 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 283.2 ms