RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PLEKHG3A1L390 1219 aa8.14□□□□□ -1.11
CDR2-203ENST00000563573 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
CDR2-203ENST00000563573 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
CDR2-203ENST00000563573 SIAH2O43255 324 aa8.14□□□□□ -1.11
CDR2-203ENST00000563573 VARSP26640 1264 aaKnown RBP8.14□□□□□ -1.11
CDR2-203ENST00000563573 NUTM2DQ5VT03 806 aaPredicted RBP8.14□□□□□ -1.11
CDR2-203ENST00000563573 MYSM1Q5VVJ2 828 aa8.14□□□□□ -1.11
CDR2-203ENST00000563573 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
CDR2-203ENST00000563573 SENP2Q9HC62 589 aa8.14□□□□□ -1.11
CDR2-203ENST00000563573 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
CDR2-203ENST00000563573 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
CDR2-203ENST00000563573 MPNDQ8N594 471 aa8.13□□□□□ -1.11
CDR2-203ENST00000563573 ZNF511Q8NB15 262 aa8.13□□□□□ -1.11
CDR2-203ENST00000563573 BAP1Q92560 729 aa8.13□□□□□ -1.11
CDR2-203ENST00000563573 HPS1Q92902 700 aa8.13□□□□□ -1.11
CDR2-203ENST00000563573 CFAP99D6REC4 459 aa8.12□□□□□ -1.11
CDR2-203ENST00000563573 KIFC2Q96AC6 838 aa8.12□□□□□ -1.11
CDR2-203ENST00000563573 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
CDR2-203ENST00000563573 DACH1Q9UI36 760 aa8.12□□□□□ -1.11
CDR2-203ENST00000563573 LILRB3O75022 631 aa8.11□□□□□ -1.11
CDR2-203ENST00000563573 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
CDR2-203ENST00000563573 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
CDR2-203ENST00000563573 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
CDR2-203ENST00000563573 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
CDR2-203ENST00000563573 SUPT5HO00267 1087 aaKnown RBP8.1□□□□□ -1.11
CDR2-203ENST00000563573 CLK2P49760 499 aaKnown RBP8.1□□□□□ -1.11
CDR2-203ENST00000563573 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
CDR2-203ENST00000563573 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
CDR2-203ENST00000563573 LIMD1Q9UGP4 676 aa8.1□□□□□ -1.11
CDR2-203ENST00000563573 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
CDR2-203ENST00000563573 CECR2Q9BXF3 1484 aa8.09□□□□□ -1.11
CDR2-203ENST00000563573 F12P00748 615 aaPredicted RBP8.09□□□□□ -1.11
CDR2-203ENST00000563573 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
CDR2-203ENST00000563573 TSC1Q92574 1164 aa8.08□□□□□ -1.12
CDR2-203ENST00000563573 QPCTQ16769 361 aa8.07□□□□□ -1.12
CDR2-203ENST00000563573 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
CDR2-203ENST00000563573 TRIM47Q96LD4 638 aa8.07□□□□□ -1.12
CDR2-203ENST00000563573 CAPN5O15484 640 aaPredicted RBP8.06□□□□□ -1.12
CDR2-203ENST00000563573 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
CDR2-203ENST00000563573 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
CDR2-203ENST00000563573 MAP10Q9P2G4 905 aa8.06□□□□□ -1.12
CDR2-203ENST00000563573 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
CDR2-203ENST00000563573 AGERQ15109 404 aa8.05□□□□□ -1.12
CDR2-203ENST00000563573 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
CDR2-203ENST00000563573 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
CDR2-203ENST00000563573 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
CDR2-203ENST00000563573 PER1O15534 1290 aaPredicted RBP8.04□□□□□ -1.12
CDR2-203ENST00000563573 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
CDR2-203ENST00000563573 MROH2BQ7Z745 1585 aa8.04□□□□□ -1.12
CDR2-203ENST00000563573 RSF1Q96T23 1441 aaPredicted RBP8.03□□□□□ -1.12
CDR2-203ENST00000563573 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
CDR2-203ENST00000563573 RTL5Q5HYW3 569 aaPredicted RBP8.03□□□□□ -1.12
CDR2-203ENST00000563573 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
CDR2-203ENST00000563573 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
CDR2-203ENST00000563573 TLL2Q9Y6L7 1015 aa8.03□□□□□ -1.12
CDR2-203ENST00000563573 EIF4G1Q04637 1599 aaKnown RBP8.02□□□□□ -1.13
CDR2-203ENST00000563573 ADH1CP00326 375 aa8.02□□□□□ -1.13
CDR2-203ENST00000563573 NNTQ13423 1086 aa8.02□□□□□ -1.13
CDR2-203ENST00000563573 FOXJ1Q92949 421 aa8.02□□□□□ -1.13
CDR2-203ENST00000563573 WFS1O76024 890 aa8.01□□□□□ -1.13
CDR2-203ENST00000563573 NR5A1Q13285 461 aa8.01□□□□□ -1.13
CDR2-203ENST00000563573 ATP1B4Q9UN42 357 aaPredicted RBP8.01□□□□□ -1.13
CDR2-203ENST00000563573 WIZO95785 1651 aa8□□□□□ -1.13
CDR2-203ENST00000563573 SNRPBP14678 240 aaKnown RBP8□□□□□ -1.13
CDR2-203ENST00000563573 ARID5BQ14865 1188 aa7.99□□□□□ -1.13
CDR2-203ENST00000563573 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
CDR2-203ENST00000563573 SCARF1Q14162 830 aa7.98□□□□□ -1.13
CDR2-203ENST00000563573 PPP2R2DQ66LE6 453 aa7.98□□□□□ -1.13
CDR2-203ENST00000563573 GPBP1L1Q9HC44 474 aaPredicted RBP7.98□□□□□ -1.13
CDR2-203ENST00000563573 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
CDR2-203ENST00000563573 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
CDR2-203ENST00000563573 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 SH3RF1Q7Z6J0 888 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 TRMT44Q8IYL2 757 aaKnown RBP7.97□□□□□ -1.13
CDR2-203ENST00000563573 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDR2-203ENST00000563573 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 MAP4K5Q9Y4K4 846 aa7.97□□□□□ -1.13
CDR2-203ENST00000563573 ZC3H4Q9UPT8 1303 aaKnown RBP7.97□□□□□ -1.13
CDR2-203ENST00000563573 TIMP2P16035 220 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
CDR2-203ENST00000563573 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 SH3BP5LQ7L8J4 393 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 NPAS3Q8IXF0 933 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
CDR2-203ENST00000563573 BMP1P13497 986 aa7.95□□□□□ -1.14
CDR2-203ENST00000563573 MRPL14Q6P1L8 145 aaKnown RBP7.95□□□□□ -1.14
CDR2-203ENST00000563573 KLF16Q9BXK1 252 aaPredicted RBP7.95□□□□□ -1.14
CDR2-203ENST00000563573 CDV3Q9UKY7 258 aaKnown RBP7.95□□□□□ -1.14
CDR2-203ENST00000563573 PEG3Q9GZU2 1588 aa7.95□□□□□ -1.14
CDR2-203ENST00000563573 CC2D2AQ9P2K1 1620 aa7.95□□□□□ -1.14
CDR2-203ENST00000563573 ATAD2BQ9ULI0 1458 aa7.94□□□□□ -1.14
CDR2-203ENST00000563573 GRM5P41594 1212 aa7.94□□□□□ -1.14
CDR2-203ENST00000563573 VASH1Q7L8A9 365 aaPredicted RBP7.94□□□□□ -1.14
CDR2-203ENST00000563573 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
CDR2-203ENST00000563573 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms