RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
NSMCE1-205ENST00000563512 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
NSMCE1-205ENST00000563512 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-205ENST00000563512 PARP9Q8IXQ6 854 aa12.91□□□□□ -0.34
NSMCE1-205ENST00000563512 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
NSMCE1-205ENST00000563512 ZPR1O75312 459 aa12.9□□□□□ -0.34
NSMCE1-205ENST00000563512 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
NSMCE1-205ENST00000563512 CASKIN1Q8WXD9 1431 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 MAGI3Q5TCQ9 1506 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 KIF14Q15058 1648 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 KDM4AO75164 1064 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
NSMCE1-205ENST00000563512 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
NSMCE1-205ENST00000563512 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-205ENST00000563512 TTC37Q6PGP7 1564 aa12.87□□□□□ -0.35
NSMCE1-205ENST00000563512 USP46P62068 366 aa12.87□□□□□ -0.35
NSMCE1-205ENST00000563512 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-205ENST00000563512 SCUBE3Q8IX30 993 aa12.86□□□□□ -0.35
NSMCE1-205ENST00000563512 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
NSMCE1-205ENST00000563512 ARAP3Q8WWN8 1544 aa12.85□□□□□ -0.35
NSMCE1-205ENST00000563512 A0A0G2JS52 829 aa12.85□□□□□ -0.35
NSMCE1-205ENST00000563512 MORN1Q5T089 497 aa12.85□□□□□ -0.35
NSMCE1-205ENST00000563512 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
NSMCE1-205ENST00000563512 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
NSMCE1-205ENST00000563512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.35
NSMCE1-205ENST00000563512 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
NSMCE1-205ENST00000563512 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
NSMCE1-205ENST00000563512 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
NSMCE1-205ENST00000563512 GGCXP38435 758 aa12.82□□□□□ -0.36
NSMCE1-205ENST00000563512 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
NSMCE1-205ENST00000563512 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
NSMCE1-205ENST00000563512 TLL1O43897 1013 aa12.81□□□□□ -0.36
NSMCE1-205ENST00000563512 SLC27A5Q9Y2P5 690 aa12.81□□□□□ -0.36
NSMCE1-205ENST00000563512 NEO1Q92859 1461 aa12.8□□□□□ -0.36
NSMCE1-205ENST00000563512 MS4A1P11836 297 aa12.8□□□□□ -0.36
NSMCE1-205ENST00000563512 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-205ENST00000563512 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
NSMCE1-205ENST00000563512 Q3C1V9 767 aa12.79□□□□□ -0.36
NSMCE1-205ENST00000563512 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
NSMCE1-205ENST00000563512 HOXA2O43364 376 aa12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 ADH1BP00325 375 aa12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 SPSB2Q99619 263 aa12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
NSMCE1-205ENST00000563512 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.36
NSMCE1-205ENST00000563512 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
NSMCE1-205ENST00000563512 SPIRE2Q8WWL2 714 aa12.77□□□□□ -0.37
NSMCE1-205ENST00000563512 PPP1R18Q6NYC8 613 aa12.76□□□□□ -0.37
NSMCE1-205ENST00000563512 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
NSMCE1-205ENST00000563512 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
NSMCE1-205ENST00000563512 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
NSMCE1-205ENST00000563512 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-205ENST00000563512 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-205ENST00000563512 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
NSMCE1-205ENST00000563512 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
NSMCE1-205ENST00000563512 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-205ENST00000563512 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
NSMCE1-205ENST00000563512 FANCAO15360 1455 aa12.73□□□□□ -0.37
NSMCE1-205ENST00000563512 HLA-CQ95604 372 aa12.73□□□□□ -0.37
NSMCE1-205ENST00000563512 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
NSMCE1-205ENST00000563512 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
NSMCE1-205ENST00000563512 FDX1P10109 184 aa12.72□□□□□ -0.37
NSMCE1-205ENST00000563512 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
NSMCE1-205ENST00000563512 RGS20O76081 388 aa12.71□□□□□ -0.37
NSMCE1-205ENST00000563512 S1PR4O95977 384 aa12.71□□□□□ -0.37
NSMCE1-205ENST00000563512 GUCA2AQ02747 115 aa12.71□□□□□ -0.37
NSMCE1-205ENST00000563512 BRICD5Q6PL45 260 aa12.71□□□□□ -0.37
NSMCE1-205ENST00000563512 THAP11Q96EK4 314 aa12.71□□□□□ -0.37
NSMCE1-205ENST00000563512 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
NSMCE1-205ENST00000563512 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
NSMCE1-205ENST00000563512 RNF19BQ6ZMZ0 732 aa12.7□□□□□ -0.38
NSMCE1-205ENST00000563512 PLCH2O75038 1416 aa12.7□□□□□ -0.38
NSMCE1-205ENST00000563512 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
NSMCE1-205ENST00000563512 ARHGEF40Q8TER5 1519 aa12.69□□□□□ -0.38
NSMCE1-205ENST00000563512 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-205ENST00000563512 COL17A1Q9UMD9 1497 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-205ENST00000563512 ABCC1P33527 1531 aa12.68□□□□□ -0.38
NSMCE1-205ENST00000563512 NDUFV2P19404 249 aa12.68□□□□□ -0.38
NSMCE1-205ENST00000563512 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
NSMCE1-205ENST00000563512 USB1Q9BQ65 265 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-205ENST00000563512 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
NSMCE1-205ENST00000563512 KDM5CP41229 1560 aa12.67□□□□□ -0.38
NSMCE1-205ENST00000563512 ADGRL1O94910 1474 aa12.66□□□□□ -0.38
NSMCE1-205ENST00000563512 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
NSMCE1-205ENST00000563512 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
NSMCE1-205ENST00000563512 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
NSMCE1-205ENST00000563512 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
NSMCE1-205ENST00000563512 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
NSMCE1-205ENST00000563512 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
NSMCE1-205ENST00000563512 MTUS2Q5JR59 1369 aa12.65□□□□□ -0.38
NSMCE1-205ENST00000563512 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
NSMCE1-205ENST00000563512 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
NSMCE1-205ENST00000563512 MSS51Q4VC12 460 aa12.64□□□□□ -0.39
NSMCE1-205ENST00000563512 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
NSMCE1-205ENST00000563512 FAM160A2Q8N612 972 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-205ENST00000563512 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 GJA5P36382 358 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 RSBN1LQ6PCB5 846 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms