RNA–Protein interactions for RNA: ENST00000563505.5

STUB1-202, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 894 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-202ENST00000563505 NBPF8Q3BBV2 869 aa34.7■■■■□ 3.15
STUB1-202ENST00000563505 POLR3AO14802 1390 aaPredicted RBP34.7■■■■□ 3.15
STUB1-202ENST00000563505 FAM83GA6ND36 823 aa34.69■■■■□ 3.14
STUB1-202ENST00000563505 ACEP12821 1306 aa34.69■■■■□ 3.14
STUB1-202ENST00000563505 TRPM1Q7Z4N2 1603 aa34.69■■■■□ 3.14
STUB1-202ENST00000563505 ITSN1Q15811 1721 aa34.69■■■■□ 3.14
STUB1-202ENST00000563505 PAK3O75914 559 aaPredicted RBP34.68■■■■□ 3.14
STUB1-202ENST00000563505 EP400Q96L91 3159 aa34.66■■■■□ 3.14
STUB1-202ENST00000563505 SRPK2P78362 688 aaKnown RBP34.66■■■■□ 3.14
STUB1-202ENST00000563505 CABP2Q9NPB3 220 aa34.66■■■■□ 3.14
STUB1-202ENST00000563505 ROCK2O75116 1388 aaKnown RBP34.65■■■■□ 3.14
STUB1-202ENST00000563505 TOPAZ1Q8N9V7 1692 aa34.65■■■■□ 3.14
STUB1-202ENST00000563505 BRWD3Q6RI45 1802 aa34.64■■■■□ 3.14
STUB1-202ENST00000563505 SEPT12Q8IYM1 358 aa34.63■■■■□ 3.13
STUB1-202ENST00000563505 CCDC9Q9Y3X0 531 aaKnown RBP34.63■■■■□ 3.13
STUB1-202ENST00000563505 ONECUT3O60422 494 aaPredicted RBP34.61■■■■□ 3.13
STUB1-202ENST00000563505 ZRANB1Q9UGI0 708 aa34.61■■■■□ 3.13
STUB1-202ENST00000563505 QRICH2Q9H0J4 1663 aa34.6■■■■□ 3.13
STUB1-202ENST00000563505 BLMP54132 1417 aaPredicted RBP34.58■■■■□ 3.13
STUB1-202ENST00000563505 PPIP5K1Q6PFW1 1433 aa34.58■■■■□ 3.13
STUB1-202ENST00000563505 CRYBG1Q9Y4K1 1723 aa34.55■■■■□ 3.12
STUB1-202ENST00000563505 EVC2Q86UK5 1308 aa34.55■■■■□ 3.12
STUB1-202ENST00000563505 COL14A1Q05707 1796 aaKnown RBP34.54■■■■□ 3.12
STUB1-202ENST00000563505 CABP1Q9NZU7 370 aa34.54■■■■□ 3.12
STUB1-202ENST00000563505 NRAPQ86VF7 1730 aa34.54■■■■□ 3.12
STUB1-202ENST00000563505 TONSLQ96HA7 1378 aa34.53■■■■□ 3.12
STUB1-202ENST00000563505 BTG4Q9NY30 223 aa34.53■■■■□ 3.12
STUB1-202ENST00000563505 NUTM2GQ5VZR2 741 aa34.52■■■■□ 3.12
STUB1-202ENST00000563505 KRT27Q7Z3Y8 459 aa34.51■■■■□ 3.12
STUB1-202ENST00000563505 SF3B2Q13435 895 aaKnown RBP34.5■■■■□ 3.11
STUB1-202ENST00000563505 ABTB2Q8N961 1025 aa34.49■■■■□ 3.11
STUB1-202ENST00000563505 PRDM11Q9NQV5 511 aa34.48■■■■□ 3.11
STUB1-202ENST00000563505 CARD11Q9BXL7 1154 aa34.47■■■■□ 3.11
STUB1-202ENST00000563505 BRD4O60885 1362 aaPredicted RBP34.47■■■■□ 3.11
STUB1-202ENST00000563505 KIAA0232Q92628 1395 aa34.46■■■■□ 3.11
STUB1-202ENST00000563505 A0A0G2JS52 829 aa34.45■■■■□ 3.11
STUB1-202ENST00000563505 MYT1Q01538 1121 aa34.45■■■■□ 3.11
STUB1-202ENST00000563505 FAM98CQ17RN3 349 aaKnown RBP34.44■■■■□ 3.1
STUB1-202ENST00000563505 USP19O94966 1318 aa34.43■■■■□ 3.1
STUB1-202ENST00000563505 USP6P35125 1406 aa34.42■■■■□ 3.1
STUB1-202ENST00000563505 SBNO2Q9Y2G9 1366 aa34.42■■■■□ 3.1
STUB1-202ENST00000563505 ZC3H6P61129 1189 aaKnown RBP34.42■■■■□ 3.1
STUB1-202ENST00000563505 CHRNA2Q15822 529 aa34.41■■■■□ 3.1
STUB1-202ENST00000563505 DEFB132Q7Z7B7 95 aa34.41■■■■□ 3.1
STUB1-202ENST00000563505 NLRP13Q86W25 1043 aa34.41■■■■□ 3.1
STUB1-202ENST00000563505 PHRF1Q9P1Y6 1649 aaKnown RBP34.41■■■■□ 3.1
STUB1-202ENST00000563505 SSH2Q76I76 1423 aa34.4■■■■□ 3.1
STUB1-202ENST00000563505 SPATA31A5Q5VU36 1347 aa34.4■■■■□ 3.1
STUB1-202ENST00000563505 SPATA31A7Q8IWB4 1347 aa34.4■■■■□ 3.1
STUB1-202ENST00000563505 CPDO75976 1380 aa34.36■■■■□ 3.09
STUB1-202ENST00000563505 GCP02774 474 aa34.35■■■■□ 3.09
STUB1-202ENST00000563505 ZNF692Q9BU19 519 aaPredicted RBP34.35■■■■□ 3.09
STUB1-202ENST00000563505 SRCAPQ6ZRS2 3230 aa34.35■■■■□ 3.09
STUB1-202ENST00000563505 NRKQ7Z2Y5 1582 aa34.33■■■■□ 3.09
STUB1-202ENST00000563505 NLRP6P59044 892 aa34.31■■■■□ 3.08
STUB1-202ENST00000563505 BAG6P46379 1132 aa34.3■■■■□ 3.08
STUB1-202ENST00000563505 CPSF1Q10570 1443 aaKnown RBP34.3■■■■□ 3.08
STUB1-202ENST00000563505 THSD7AQ9UPZ6 1657 aa34.29■■■■□ 3.08
STUB1-202ENST00000563505 SPATA31A1Q5TZJ5 1347 aa34.29■■■■□ 3.08
STUB1-202ENST00000563505 TTC21BQ7Z4L5 1316 aa34.29■■■■□ 3.08
STUB1-202ENST00000563505 STRN4Q9NRL3 753 aa34.28■■■■□ 3.08
STUB1-202ENST00000563505 CAMTA1Q9Y6Y1 1673 aa34.26■■■■□ 3.08
STUB1-202ENST00000563505 RGPD1P0DJD0 1748 aa34.24■■■■□ 3.07
STUB1-202ENST00000563505 EVA1CP58658 441 aa34.23■■■■□ 3.07
STUB1-202ENST00000563505 SLIT3O75094 1523 aa34.23■■■■□ 3.07
STUB1-202ENST00000563505 PUS7Q96PZ0 661 aaKnown RBP34.22■■■■□ 3.07
STUB1-202ENST00000563505 TESK2Q96S53 571 aa34.22■■■■□ 3.07
STUB1-202ENST00000563505 TTC21AQ8NDW8 1320 aa34.22■■■■□ 3.07
STUB1-202ENST00000563505 LMO7Q8WWI1 1683 aa34.22■■■■□ 3.07
STUB1-202ENST00000563505 PIK3C2AO00443 1686 aa34.21■■■■□ 3.07
STUB1-202ENST00000563505 KTN1Q86UP2 1357 aaKnown RBP34.21■■■■□ 3.07
STUB1-202ENST00000563505 AKAP12Q02952 1782 aa34.21■■■■□ 3.07
STUB1-202ENST00000563505 ST20-MTHFSA0A0A6YYL1 179 aa34.2■■■■□ 3.07
STUB1-202ENST00000563505 FAM182BQ5T319 152 aa34.2■■■■□ 3.07
STUB1-202ENST00000563505 LARP1Q6PKG0 1096 aaKnown RBP34.2■■■■□ 3.07
STUB1-202ENST00000563505 SLC12A5Q9H2X9 1139 aa34.18■■■■□ 3.06
STUB1-202ENST00000563505 CD163L1Q9NR16 1453 aa34.18■■■■□ 3.06
STUB1-202ENST00000563505 AATKQ6ZMQ8 1374 aa34.16■■■■□ 3.06
STUB1-202ENST00000563505 BARGINQ6ZT62 677 aa34.15■■■■□ 3.06
STUB1-202ENST00000563505 TMC1Q8TDI8 760 aa34.15■■■■□ 3.06
STUB1-202ENST00000563505 EN1Q05925 392 aaPredicted RBP34.14■■■■□ 3.06
STUB1-202ENST00000563505 FAM196AQ6ZSG2 479 aa34.14■■■■□ 3.06
STUB1-202ENST00000563505 USP35Q9P2H5 1018 aa34.14■■■■□ 3.06
STUB1-202ENST00000563505 CLSPNQ9HAW4 1339 aa34.13■■■■□ 3.05
STUB1-202ENST00000563505 KCNH5Q8NCM2 988 aa34.13■■■■□ 3.05
STUB1-202ENST00000563505 PCGF6Q9BYE7 350 aa34.13■■■■□ 3.05
STUB1-202ENST00000563505 COL5A2P05997 1499 aaPredicted RBP34.13■■■■□ 3.05
STUB1-202ENST00000563505 DISP2A7MBM2 1401 aa34.13■■■■□ 3.05
STUB1-202ENST00000563505 ARHGEF25Q86VW2 580 aa34.12■■■■□ 3.05
STUB1-202ENST00000563505 TIMELESSQ9UNS1 1208 aa34.12■■■■□ 3.05
STUB1-202ENST00000563505 ZBTB7CA1YPR0 619 aa34.11■■■■□ 3.05
STUB1-202ENST00000563505 TCP11L2Q8N4U5 519 aa34.11■■■■□ 3.05
STUB1-202ENST00000563505 TNS1Q9HBL0 1735 aaKnown RBP34.1■■■■□ 3.05
STUB1-202ENST00000563505 SLC24A1O60721 1099 aa34.1■■■■□ 3.05
STUB1-202ENST00000563505 MON2Q7Z3U7 1717 aa34.1■■■■□ 3.05
STUB1-202ENST00000563505 USP31Q70CQ4 1352 aa34.1■■■■□ 3.05
STUB1-202ENST00000563505 HDGFL2Q7Z4V5 671 aaPredicted RBP34.09■■■■□ 3.05
STUB1-202ENST00000563505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.09■■■■□ 3.05
STUB1-202ENST00000563505 AXIN2Q9Y2T1 843 aa34.09■■■■□ 3.05
STUB1-202ENST00000563505 PDE3BQ13370 1112 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms