RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 EVC2Q86UK5 1308 aa13.24□□□□□ -0.29
UBFD1-202ENST00000563366 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
UBFD1-202ENST00000563366 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
UBFD1-202ENST00000563366 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
UBFD1-202ENST00000563366 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
UBFD1-202ENST00000563366 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
UBFD1-202ENST00000563366 SOX12O15370 315 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 RALBP1Q15311 655 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 POGKQ9P215 609 aa13.21□□□□□ -0.29
UBFD1-202ENST00000563366 MED14O60244 1454 aa13.21□□□□□ -0.3
UBFD1-202ENST00000563366 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
UBFD1-202ENST00000563366 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
UBFD1-202ENST00000563366 HAX1O00165 279 aa13.2□□□□□ -0.3
UBFD1-202ENST00000563366 NLRP6P59044 892 aa13.2□□□□□ -0.3
UBFD1-202ENST00000563366 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
UBFD1-202ENST00000563366 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
UBFD1-202ENST00000563366 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
UBFD1-202ENST00000563366 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
UBFD1-202ENST00000563366 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 PANK3Q9H999 370 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 STK26Q9P289 416 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 METP08581 1390 aa13.18□□□□□ -0.3
UBFD1-202ENST00000563366 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-202ENST00000563366 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
UBFD1-202ENST00000563366 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
UBFD1-202ENST00000563366 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
UBFD1-202ENST00000563366 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
UBFD1-202ENST00000563366 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
UBFD1-202ENST00000563366 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
UBFD1-202ENST00000563366 PTCH1Q13635 1447 aa13.16□□□□□ -0.3
UBFD1-202ENST00000563366 LTKP29376 864 aa13.16□□□□□ -0.3
UBFD1-202ENST00000563366 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
UBFD1-202ENST00000563366 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
UBFD1-202ENST00000563366 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.3
UBFD1-202ENST00000563366 BRD4O60885 1362 aaPredicted RBP13.15□□□□□ -0.3
UBFD1-202ENST00000563366 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
UBFD1-202ENST00000563366 TIE1P35590 1138 aa13.13□□□□□ -0.31
UBFD1-202ENST00000563366 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
UBFD1-202ENST00000563366 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
UBFD1-202ENST00000563366 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
UBFD1-202ENST00000563366 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
UBFD1-202ENST00000563366 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
UBFD1-202ENST00000563366 NSD2O96028 1365 aa13.12□□□□□ -0.31
UBFD1-202ENST00000563366 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
UBFD1-202ENST00000563366 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
UBFD1-202ENST00000563366 ATP7BP35670 1465 aa13.11□□□□□ -0.31
UBFD1-202ENST00000563366 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
UBFD1-202ENST00000563366 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBFD1-202ENST00000563366 CLCN6P51797 869 aa13.1□□□□□ -0.31
UBFD1-202ENST00000563366 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
UBFD1-202ENST00000563366 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
UBFD1-202ENST00000563366 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
UBFD1-202ENST00000563366 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
UBFD1-202ENST00000563366 PPP1R37O75864 691 aa13.09□□□□□ -0.31
UBFD1-202ENST00000563366 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
UBFD1-202ENST00000563366 NSD3Q9BZ95 1437 aa13.09□□□□□ -0.31
UBFD1-202ENST00000563366 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.08□□□□□ -0.32
UBFD1-202ENST00000563366 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
UBFD1-202ENST00000563366 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
UBFD1-202ENST00000563366 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
UBFD1-202ENST00000563366 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
UBFD1-202ENST00000563366 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
UBFD1-202ENST00000563366 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
UBFD1-202ENST00000563366 EVX2Q03828 476 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 NBR1Q14596 966 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
UBFD1-202ENST00000563366 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
UBFD1-202ENST00000563366 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
UBFD1-202ENST00000563366 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
UBFD1-202ENST00000563366 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
UBFD1-202ENST00000563366 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
UBFD1-202ENST00000563366 CDC42BPGQ6DT37 1551 aa13.06□□□□□ -0.32
UBFD1-202ENST00000563366 INSRP06213 1382 aa13.06□□□□□ -0.32
UBFD1-202ENST00000563366 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
UBFD1-202ENST00000563366 WDR70Q9NW82 654 aa13.05□□□□□ -0.32
UBFD1-202ENST00000563366 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
UBFD1-202ENST00000563366 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
UBFD1-202ENST00000563366 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
UBFD1-202ENST00000563366 FMN2Q9NZ56 1722 aa13.03□□□□□ -0.32
UBFD1-202ENST00000563366 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
UBFD1-202ENST00000563366 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
UBFD1-202ENST00000563366 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
UBFD1-202ENST00000563366 NALCNQ8IZF0 1738 aa13.02□□□□□ -0.32
UBFD1-202ENST00000563366 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
UBFD1-202ENST00000563366 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.33
UBFD1-202ENST00000563366 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.33
UBFD1-202ENST00000563366 CCDC184Q52MB2 194 aa13.01□□□□□ -0.33
UBFD1-202ENST00000563366 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
UBFD1-202ENST00000563366 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms