RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 BTG4Q9NY30 223 aa25.02■■□□□ 1.6
TSC2-219ENST00000563346 COL14A1Q05707 1796 aaKnown RBP25.01■■□□□ 1.59
TSC2-219ENST00000563346 BRWD3Q6RI45 1802 aa25.01■■□□□ 1.59
TSC2-219ENST00000563346 NBPF1Q3BBV0 1214 aa25.01■■□□□ 1.59
TSC2-219ENST00000563346 A0A0G2JS52 829 aa24.99■■□□□ 1.59
TSC2-219ENST00000563346 MYT1Q01538 1121 aa24.99■■□□□ 1.59
TSC2-219ENST00000563346 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
TSC2-219ENST00000563346 CCDC61Q9Y6R9 512 aa24.98■■□□□ 1.59
TSC2-219ENST00000563346 ONECUT3O60422 494 aaPredicted RBP24.97■■□□□ 1.59
TSC2-219ENST00000563346 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
TSC2-219ENST00000563346 PRDM11Q9NQV5 511 aa24.96■■□□□ 1.59
TSC2-219ENST00000563346 TOPAZ1Q8N9V7 1692 aa24.96■■□□□ 1.59
TSC2-219ENST00000563346 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.59
TSC2-219ENST00000563346 ACEP12821 1306 aa24.95■■□□□ 1.58
TSC2-219ENST00000563346 KRT27Q7Z3Y8 459 aa24.95■■□□□ 1.58
TSC2-219ENST00000563346 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
TSC2-219ENST00000563346 SRPK2P78362 688 aaKnown RBP24.94■■□□□ 1.58
TSC2-219ENST00000563346 SF3B2Q13435 895 aaKnown RBP24.94■■□□□ 1.58
TSC2-219ENST00000563346 DEFB132Q7Z7B7 95 aa24.94■■□□□ 1.58
TSC2-219ENST00000563346 POLR3AO14802 1390 aaPredicted RBP24.93■■□□□ 1.58
TSC2-219ENST00000563346 FAM98CQ17RN3 349 aaKnown RBP24.93■■□□□ 1.58
TSC2-219ENST00000563346 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
TSC2-219ENST00000563346 PLEKHG3A1L390 1219 aa24.92■■□□□ 1.58
TSC2-219ENST00000563346 NUTM2GQ5VZR2 741 aa24.92■■□□□ 1.58
TSC2-219ENST00000563346 L3MBTL2Q969R5 705 aa24.92■■□□□ 1.58
TSC2-219ENST00000563346 PHRF1Q9P1Y6 1649 aaKnown RBP24.9■■□□□ 1.58
TSC2-219ENST00000563346 KIAA0232Q92628 1395 aa24.9■■□□□ 1.58
TSC2-219ENST00000563346 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.58
TSC2-219ENST00000563346 PPIP5K1Q6PFW1 1433 aa24.88■■□□□ 1.57
TSC2-219ENST00000563346 ZC3H6P61129 1189 aaKnown RBP24.88■■□□□ 1.57
TSC2-219ENST00000563346 ABTB2Q8N961 1025 aa24.88■■□□□ 1.57
TSC2-219ENST00000563346 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
TSC2-219ENST00000563346 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
TSC2-219ENST00000563346 SPATA31A5Q5VU36 1347 aa24.87■■□□□ 1.57
TSC2-219ENST00000563346 SPATA31A7Q8IWB4 1347 aa24.87■■□□□ 1.57
TSC2-219ENST00000563346 NEUROD1Q13562 356 aa24.87■■□□□ 1.57
TSC2-219ENST00000563346 CHRNA2Q15822 529 aa24.87■■□□□ 1.57
TSC2-219ENST00000563346 STRN4Q9NRL3 753 aa24.85■■□□□ 1.57
TSC2-219ENST00000563346 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.56
TSC2-219ENST00000563346 EVA1CP58658 441 aa24.81■■□□□ 1.56
TSC2-219ENST00000563346 NLRP13Q86W25 1043 aa24.81■■□□□ 1.56
TSC2-219ENST00000563346 NRKQ7Z2Y5 1582 aa24.8■■□□□ 1.56
TSC2-219ENST00000563346 PSDA5PKW4 1024 aaPredicted RBP24.8■■□□□ 1.56
TSC2-219ENST00000563346 SPATA31A1Q5TZJ5 1347 aa24.8■■□□□ 1.56
TSC2-219ENST00000563346 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
TSC2-219ENST00000563346 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
TSC2-219ENST00000563346 EVC2Q86UK5 1308 aa24.79■■□□□ 1.56
TSC2-219ENST00000563346 THSD7AQ9UPZ6 1657 aa24.78■■□□□ 1.56
TSC2-219ENST00000563346 BAG6P46379 1132 aa24.78■■□□□ 1.56
TSC2-219ENST00000563346 BRD4O60885 1362 aaPredicted RBP24.78■■□□□ 1.56
TSC2-219ENST00000563346 FAM182BQ5T319 152 aa24.77■■□□□ 1.56
TSC2-219ENST00000563346 USP35Q9P2H5 1018 aa24.77■■□□□ 1.56
TSC2-219ENST00000563346 USP19O94966 1318 aa24.77■■□□□ 1.56
TSC2-219ENST00000563346 CPDO75976 1380 aa24.76■■□□□ 1.55
TSC2-219ENST00000563346 GCP02774 474 aa24.75■■□□□ 1.55
TSC2-219ENST00000563346 USP6P35125 1406 aa24.74■■□□□ 1.55
TSC2-219ENST00000563346 SSH2Q76I76 1423 aa24.74■■□□□ 1.55
TSC2-219ENST00000563346 RGPD1P0DJD0 1748 aa24.74■■□□□ 1.55
TSC2-219ENST00000563346 CAMTA1Q9Y6Y1 1673 aa24.72■■□□□ 1.55
TSC2-219ENST00000563346 NLRP6P59044 892 aa24.72■■□□□ 1.55
TSC2-219ENST00000563346 ZBTB7CA1YPR0 619 aa24.71■■□□□ 1.55
TSC2-219ENST00000563346 LARP1Q6PKG0 1096 aaKnown RBP24.71■■□□□ 1.55
TSC2-219ENST00000563346 LMO7Q8WWI1 1683 aa24.71■■□□□ 1.55
TSC2-219ENST00000563346 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
TSC2-219ENST00000563346 LRP5O75197 1615 aa24.68■■□□□ 1.54
TSC2-219ENST00000563346 EN1Q05925 392 aaPredicted RBP24.68■■□□□ 1.54
TSC2-219ENST00000563346 PDE3BQ13370 1112 aa24.68■■□□□ 1.54
TSC2-219ENST00000563346 FAM196AQ6ZSG2 479 aa24.68■■□□□ 1.54
TSC2-219ENST00000563346 TCP11L2Q8N4U5 519 aa24.68■■□□□ 1.54
TSC2-219ENST00000563346 ZNF692Q9BU19 519 aaPredicted RBP24.66■■□□□ 1.54
TSC2-219ENST00000563346 COL5A2P05997 1499 aaPredicted RBP24.65■■□□□ 1.54
TSC2-219ENST00000563346 PIK3C2AO00443 1686 aa24.65■■□□□ 1.54
TSC2-219ENST00000563346 SLIT3O75094 1523 aa24.65■■□□□ 1.54
TSC2-219ENST00000563346 TNS1Q9HBL0 1735 aaKnown RBP24.64■■□□□ 1.54
TSC2-219ENST00000563346 THRAP3Q9Y2W1 955 aaKnown RBP24.64■■□□□ 1.54
TSC2-219ENST00000563346 AKAP12Q02952 1782 aa24.63■■□□□ 1.53
TSC2-219ENST00000563346 TRIM37O94972 964 aa24.63■■□□□ 1.53
TSC2-219ENST00000563346 CARD11Q9BXL7 1154 aa24.62■■□□□ 1.53
TSC2-219ENST00000563346 AATKQ6ZMQ8 1374 aa24.62■■□□□ 1.53
TSC2-219ENST00000563346 TONSLQ96HA7 1378 aa24.62■■□□□ 1.53
TSC2-219ENST00000563346 TTC21BQ7Z4L5 1316 aa24.61■■□□□ 1.53
TSC2-219ENST00000563346 DISP2A7MBM2 1401 aa24.61■■□□□ 1.53
TSC2-219ENST00000563346 CRB1P82279 1406 aa24.61■■□□□ 1.53
TSC2-219ENST00000563346 R3HDM1Q15032 1099 aaKnown RBP24.6■■□□□ 1.53
TSC2-219ENST00000563346 TTC21AQ8NDW8 1320 aa24.6■■□□□ 1.53
TSC2-219ENST00000563346 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
TSC2-219ENST00000563346 KTN1Q86UP2 1357 aaKnown RBP24.58■■□□□ 1.53
TSC2-219ENST00000563346 SOX12O15370 315 aa24.58■■□□□ 1.53
TSC2-219ENST00000563346 APBA3O96018 575 aa24.58■■□□□ 1.53
TSC2-219ENST00000563346 EZH2Q15910 746 aaKnown RBP24.58■■□□□ 1.53
TSC2-219ENST00000563346 TOM1L2Q6ZVM7 507 aa24.58■■□□□ 1.53
TSC2-219ENST00000563346 SBNO2Q9Y2G9 1366 aa24.57■■□□□ 1.52
TSC2-219ENST00000563346 CPSF1Q10570 1443 aaKnown RBP24.57■■□□□ 1.52
TSC2-219ENST00000563346 PARP4Q9UKK3 1724 aaKnown RBP24.56■■□□□ 1.52
TSC2-219ENST00000563346 COL18A1P39060 1754 aa24.54■■□□□ 1.52
TSC2-219ENST00000563346 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
TSC2-219ENST00000563346 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
TSC2-219ENST00000563346 CAMKK2Q96RR4 588 aa24.53■■□□□ 1.52
TSC2-219ENST00000563346 PARD3Q8TEW0 1356 aa24.53■■□□□ 1.52
TSC2-219ENST00000563346 MON2Q7Z3U7 1717 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms