RNA–Protein interactions for RNA: ENST00000563028.1

KIFC3-213, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-213ENST00000563028 UNC5CLQ8IV45 518 aa33.47■■■□□ 2.95
KIFC3-213ENST00000563028 POLR3AO14802 1390 aaPredicted RBP33.47■■■□□ 2.95
KIFC3-213ENST00000563028 GJD4Q96KN9 370 aaPredicted RBP33.43■■■□□ 2.94
KIFC3-213ENST00000563028 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.42■■■□□ 2.94
KIFC3-213ENST00000563028 UPF1Q92900 1129 aaKnown RBP eCLIP33.42■■■□□ 2.94
KIFC3-213ENST00000563028 PPIP5K1Q6PFW1 1433 aa33.42■■■□□ 2.94
KIFC3-213ENST00000563028 FAM83GA6ND36 823 aa33.41■■■□□ 2.94
KIFC3-213ENST00000563028 EVC2Q86UK5 1308 aa33.4■■■□□ 2.94
KIFC3-213ENST00000563028 CARD11Q9BXL7 1154 aa33.38■■■□□ 2.93
KIFC3-213ENST00000563028 PLCH1Q4KWH8 1693 aa33.36■■■□□ 2.93
KIFC3-213ENST00000563028 CABP1Q9NZU7 370 aa33.35■■■□□ 2.93
KIFC3-213ENST00000563028 NWD2Q9ULI1 1742 aa33.34■■■□□ 2.93
KIFC3-213ENST00000563028 RALGAPBQ86X10 1494 aa33.34■■■□□ 2.93
KIFC3-213ENST00000563028 NUTM2GQ5VZR2 741 aa33.34■■■□□ 2.93
KIFC3-213ENST00000563028 CRYBG1Q9Y4K1 1723 aa33.33■■■□□ 2.93
KIFC3-213ENST00000563028 VPS72Q15906 364 aa33.32■■■□□ 2.92
KIFC3-213ENST00000563028 GLI3P10071 1580 aa33.31■■■□□ 2.92
KIFC3-213ENST00000563028 ABTB2Q8N961 1025 aa33.31■■■□□ 2.92
KIFC3-213ENST00000563028 BTG4Q9NY30 223 aa33.3■■■□□ 2.92
KIFC3-213ENST00000563028 CCDC9Q9Y3X0 531 aaKnown RBP33.3■■■□□ 2.92
KIFC3-213ENST00000563028 COL14A1Q05707 1796 aaKnown RBP33.28■■■□□ 2.92
KIFC3-213ENST00000563028 ATAD2Q6PL18 1390 aa33.27■■■□□ 2.92
KIFC3-213ENST00000563028 PRDM11Q9NQV5 511 aa33.27■■■□□ 2.92
KIFC3-213ENST00000563028 BRD4O60885 1362 aaPredicted RBP33.25■■■□□ 2.91
KIFC3-213ENST00000563028 PHRF1Q9P1Y6 1649 aaKnown RBP33.25■■■□□ 2.91
KIFC3-213ENST00000563028 KIAA0232Q92628 1395 aa33.24■■■□□ 2.91
KIFC3-213ENST00000563028 SBNO2Q9Y2G9 1366 aa33.24■■■□□ 2.91
KIFC3-213ENST00000563028 USP6P35125 1406 aa33.24■■■□□ 2.91
KIFC3-213ENST00000563028 NRAPQ86VF7 1730 aa33.23■■■□□ 2.91
KIFC3-213ENST00000563028 ZC3H6P61129 1189 aaKnown RBP33.22■■■□□ 2.91
KIFC3-213ENST00000563028 NLRP13Q86W25 1043 aa33.21■■■□□ 2.91
KIFC3-213ENST00000563028 CHRNA2Q15822 529 aa33.2■■■□□ 2.91
KIFC3-213ENST00000563028 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
KIFC3-213ENST00000563028 USP19O94966 1318 aa33.19■■■□□ 2.9
KIFC3-213ENST00000563028 SEPT12Q8IYM1 358 aa33.18■■■□□ 2.9
KIFC3-213ENST00000563028 ZNF692Q9BU19 519 aaPredicted RBP33.17■■■□□ 2.9
KIFC3-213ENST00000563028 ONECUT3O60422 494 aaPredicted RBP33.16■■■□□ 2.9
KIFC3-213ENST00000563028 SSH2Q76I76 1423 aa33.16■■■□□ 2.9
KIFC3-213ENST00000563028 NRKQ7Z2Y5 1582 aa33.16■■■□□ 2.9
KIFC3-213ENST00000563028 NLRP6P59044 892 aa33.14■■■□□ 2.9
KIFC3-213ENST00000563028 GCP02774 474 aa33.13■■■□□ 2.89
KIFC3-213ENST00000563028 SPATA31A5Q5VU36 1347 aa33.11■■■□□ 2.89
KIFC3-213ENST00000563028 SPATA31A7Q8IWB4 1347 aa33.11■■■□□ 2.89
KIFC3-213ENST00000563028 FAM98CQ17RN3 349 aaKnown RBP33.11■■■□□ 2.89
KIFC3-213ENST00000563028 CPDO75976 1380 aa33.1■■■□□ 2.89
KIFC3-213ENST00000563028 A0A0G2JS52 829 aa33.1■■■□□ 2.89
KIFC3-213ENST00000563028 MYT1Q01538 1121 aa33.1■■■□□ 2.89
KIFC3-213ENST00000563028 STRN4Q9NRL3 753 aa33.1■■■□□ 2.89
KIFC3-213ENST00000563028 CPSF1Q10570 1443 aaKnown RBP33.1■■■□□ 2.89
KIFC3-213ENST00000563028 BRWD3Q6RI45 1802 aa33.09■■■□□ 2.89
KIFC3-213ENST00000563028 AKAP12Q02952 1782 aa33.09■■■□□ 2.89
KIFC3-213ENST00000563028 TTC21BQ7Z4L5 1316 aa33.09■■■□□ 2.89
KIFC3-213ENST00000563028 ST20-MTHFSA0A0A6YYL1 179 aa33.08■■■□□ 2.89
KIFC3-213ENST00000563028 CLSPNQ9HAW4 1339 aa33.07■■■□□ 2.88
KIFC3-213ENST00000563028 KTN1Q86UP2 1357 aaKnown RBP33.07■■■□□ 2.88
KIFC3-213ENST00000563028 PIK3C2AO00443 1686 aa33.07■■■□□ 2.88
KIFC3-213ENST00000563028 EVA1CP58658 441 aa33.06■■■□□ 2.88
KIFC3-213ENST00000563028 TMC1Q8TDI8 760 aa33.06■■■□□ 2.88
KIFC3-213ENST00000563028 KRT27Q7Z3Y8 459 aa33.05■■■□□ 2.88
KIFC3-213ENST00000563028 TESK2Q96S53 571 aa33.05■■■□□ 2.88
KIFC3-213ENST00000563028 EP400Q96L91 3159 aa33.05■■■□□ 2.88
KIFC3-213ENST00000563028 TTC21AQ8NDW8 1320 aa33.04■■■□□ 2.88
KIFC3-213ENST00000563028 SPATA31A1Q5TZJ5 1347 aa33.03■■■□□ 2.88
KIFC3-213ENST00000563028 SLIT3O75094 1523 aa33.03■■■□□ 2.88
KIFC3-213ENST00000563028 TIMELESSQ9UNS1 1208 aa33.03■■■□□ 2.88
KIFC3-213ENST00000563028 CAMTA1Q9Y6Y1 1673 aa33.03■■■□□ 2.88
KIFC3-213ENST00000563028 CCDC125Q86Z20 511 aa33.02■■■□□ 2.88
KIFC3-213ENST00000563028 PUS7Q96PZ0 661 aaKnown RBP33.02■■■□□ 2.88
KIFC3-213ENST00000563028 SLC12A5Q9H2X9 1139 aa33.02■■■□□ 2.88
KIFC3-213ENST00000563028 ZBTB7CA1YPR0 619 aa33.01■■■□□ 2.87
KIFC3-213ENST00000563028 LMO7Q8WWI1 1683 aa33.01■■■□□ 2.87
KIFC3-213ENST00000563028 CD163L1Q9NR16 1453 aa32.99■■■□□ 2.87
KIFC3-213ENST00000563028 SLC24A1O60721 1099 aa32.99■■■□□ 2.87
KIFC3-213ENST00000563028 MON2Q7Z3U7 1717 aa32.99■■■□□ 2.87
KIFC3-213ENST00000563028 HDGFL2Q7Z4V5 671 aaPredicted RBP32.98■■■□□ 2.87
KIFC3-213ENST00000563028 LARP1Q6PKG0 1096 aaKnown RBP32.97■■■□□ 2.87
KIFC3-213ENST00000563028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.97■■■□□ 2.87
KIFC3-213ENST00000563028 USP35Q9P2H5 1018 aa32.97■■■□□ 2.87
KIFC3-213ENST00000563028 USP47Q96K76 1375 aa32.96■■■□□ 2.87
KIFC3-213ENST00000563028 KCNH5Q8NCM2 988 aa32.95■■■□□ 2.87
KIFC3-213ENST00000563028 SOX12O15370 315 aa32.94■■■□□ 2.86
KIFC3-213ENST00000563028 TERF2IPQ9NYB0 399 aa32.94■■■□□ 2.86
KIFC3-213ENST00000563028 THSD7AQ9UPZ6 1657 aa32.94■■■□□ 2.86
KIFC3-213ENST00000563028 AATKQ6ZMQ8 1374 aa32.94■■■□□ 2.86
KIFC3-213ENST00000563028 BLMP54132 1417 aaPredicted RBP32.94■■■□□ 2.86
KIFC3-213ENST00000563028 COL5A2P05997 1499 aaPredicted RBP32.93■■■□□ 2.86
KIFC3-213ENST00000563028 CCER1Q8TC90 406 aaPredicted RBP32.91■■■□□ 2.86
KIFC3-213ENST00000563028 ZRANB1Q9UGI0 708 aa32.91■■■□□ 2.86
KIFC3-213ENST00000563028 BARGINQ6ZT62 677 aa32.9■■■□□ 2.86
KIFC3-213ENST00000563028 ARHGEF25Q86VW2 580 aa32.9■■■□□ 2.86
KIFC3-213ENST00000563028 NME9Q86XW9 330 aa32.9■■■□□ 2.86
KIFC3-213ENST00000563028 A0A1W2PP64 1363 aa32.9■■■□□ 2.86
KIFC3-213ENST00000563028 TCP11L2Q8N4U5 519 aa32.89■■■□□ 2.86
KIFC3-213ENST00000563028 EDC4Q6P2E9 1401 aaKnown RBP32.88■■■□□ 2.85
KIFC3-213ENST00000563028 USP31Q70CQ4 1352 aa32.88■■■□□ 2.85
KIFC3-213ENST00000563028 NINLQ9Y2I6 1382 aa32.88■■■□□ 2.85
KIFC3-213ENST00000563028 TMF1P82094 1093 aa32.88■■■□□ 2.85
KIFC3-213ENST00000563028 SF3B2Q13435 895 aaKnown RBP32.87■■■□□ 2.85
KIFC3-213ENST00000563028 FAM182BQ5T319 152 aa32.87■■■□□ 2.85
KIFC3-213ENST00000563028 AXIN2Q9Y2T1 843 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms