RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 CCDC61Q9Y6R9 512 aa23.57■■□□□ 1.36
KLHDC4-210ENST00000562913 ATAD2Q6PL18 1390 aa23.56■■□□□ 1.36
KLHDC4-210ENST00000562913 ACEP12821 1306 aa23.56■■□□□ 1.36
KLHDC4-210ENST00000562913 SRPK2P78362 688 aaKnown RBP23.55■■□□□ 1.36
KLHDC4-210ENST00000562913 CRYBG1Q9Y4K1 1723 aa23.55■■□□□ 1.36
KLHDC4-210ENST00000562913 POLR3AO14802 1390 aaPredicted RBP23.54■■□□□ 1.36
KLHDC4-210ENST00000562913 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
KLHDC4-210ENST00000562913 VPS72Q15906 364 aa23.53■■□□□ 1.36
KLHDC4-210ENST00000562913 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
KLHDC4-210ENST00000562913 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
KLHDC4-210ENST00000562913 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
KLHDC4-210ENST00000562913 EP400Q96L91 3159 aa23.51■■□□□ 1.35
KLHDC4-210ENST00000562913 CCDC9Q9Y3X0 531 aaKnown RBP23.51■■□□□ 1.35
KLHDC4-210ENST00000562913 BTG4Q9NY30 223 aa23.5■■□□□ 1.35
KLHDC4-210ENST00000562913 COL14A1Q05707 1796 aaKnown RBP23.5■■□□□ 1.35
KLHDC4-210ENST00000562913 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
KLHDC4-210ENST00000562913 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
KLHDC4-210ENST00000562913 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
KLHDC4-210ENST00000562913 TRIM26Q12899 539 aaPredicted RBP23.48■■□□□ 1.35
KLHDC4-210ENST00000562913 PHRF1Q9P1Y6 1649 aaKnown RBP23.47■■□□□ 1.35
KLHDC4-210ENST00000562913 BRWD3Q6RI45 1802 aa23.46■■□□□ 1.35
KLHDC4-210ENST00000562913 PRDM11Q9NQV5 511 aa23.46■■□□□ 1.35
KLHDC4-210ENST00000562913 SEPT12Q8IYM1 358 aa23.45■■□□□ 1.34
KLHDC4-210ENST00000562913 KIAA0232Q92628 1395 aa23.43■■□□□ 1.34
KLHDC4-210ENST00000562913 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
KLHDC4-210ENST00000562913 ABTB2Q8N961 1025 aa23.43■■□□□ 1.34
KLHDC4-210ENST00000562913 CABP1Q9NZU7 370 aa23.43■■□□□ 1.34
KLHDC4-210ENST00000562913 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
KLHDC4-210ENST00000562913 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
KLHDC4-210ENST00000562913 ZC3H6P61129 1189 aaKnown RBP23.41■■□□□ 1.34
KLHDC4-210ENST00000562913 CHRNA2Q15822 529 aa23.41■■□□□ 1.34
KLHDC4-210ENST00000562913 A0A0G2JS52 829 aa23.39■■□□□ 1.33
KLHDC4-210ENST00000562913 MYT1Q01538 1121 aa23.39■■□□□ 1.33
KLHDC4-210ENST00000562913 FAM98CQ17RN3 349 aaKnown RBP23.39■■□□□ 1.33
KLHDC4-210ENST00000562913 NRKQ7Z2Y5 1582 aa23.38■■□□□ 1.33
KLHDC4-210ENST00000562913 USP6P35125 1406 aa23.37■■□□□ 1.33
KLHDC4-210ENST00000562913 CARD11Q9BXL7 1154 aa23.37■■□□□ 1.33
KLHDC4-210ENST00000562913 USP19O94966 1318 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 KRT27Q7Z3Y8 459 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 NLRP13Q86W25 1043 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 BRD4O60885 1362 aaPredicted RBP23.36■■□□□ 1.33
KLHDC4-210ENST00000562913 STRN4Q9NRL3 753 aa23.35■■□□□ 1.33
KLHDC4-210ENST00000562913 CPDO75976 1380 aa23.32■■□□□ 1.32
KLHDC4-210ENST00000562913 GCP02774 474 aa23.32■■□□□ 1.32
KLHDC4-210ENST00000562913 BLMP54132 1417 aaPredicted RBP23.32■■□□□ 1.32
KLHDC4-210ENST00000562913 SSH2Q76I76 1423 aa23.32■■□□□ 1.32
KLHDC4-210ENST00000562913 NLRP6P59044 892 aa23.31■■□□□ 1.32
KLHDC4-210ENST00000562913 SPATA31A1Q5TZJ5 1347 aa23.31■■□□□ 1.32
KLHDC4-210ENST00000562913 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
KLHDC4-210ENST00000562913 CAMTA1Q9Y6Y1 1673 aa23.3■■□□□ 1.32
KLHDC4-210ENST00000562913 AKAP12Q02952 1782 aa23.29■■□□□ 1.32
KLHDC4-210ENST00000562913 PIK3C2AO00443 1686 aa23.29■■□□□ 1.32
KLHDC4-210ENST00000562913 LMO7Q8WWI1 1683 aa23.29■■□□□ 1.32
KLHDC4-210ENST00000562913 EVA1CP58658 441 aa23.29■■□□□ 1.32
KLHDC4-210ENST00000562913 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
KLHDC4-210ENST00000562913 ZNF692Q9BU19 519 aaPredicted RBP23.28■■□□□ 1.32
KLHDC4-210ENST00000562913 USP35Q9P2H5 1018 aa23.27■■□□□ 1.32
KLHDC4-210ENST00000562913 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
KLHDC4-210ENST00000562913 SLIT3O75094 1523 aa23.26■■□□□ 1.31
KLHDC4-210ENST00000562913 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
KLHDC4-210ENST00000562913 CPSF1Q10570 1443 aaKnown RBP23.25■■□□□ 1.31
KLHDC4-210ENST00000562913 SF3B2Q13435 895 aaKnown RBP23.25■■□□□ 1.31
KLHDC4-210ENST00000562913 FAM182BQ5T319 152 aa23.25■■□□□ 1.31
KLHDC4-210ENST00000562913 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
KLHDC4-210ENST00000562913 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
KLHDC4-210ENST00000562913 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
KLHDC4-210ENST00000562913 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
KLHDC4-210ENST00000562913 ZRANB1Q9UGI0 708 aa23.21■■□□□ 1.31
KLHDC4-210ENST00000562913 TTC21AQ8NDW8 1320 aa23.21■■□□□ 1.31
KLHDC4-210ENST00000562913 COL5A2P05997 1499 aaPredicted RBP23.21■■□□□ 1.31
KLHDC4-210ENST00000562913 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
KLHDC4-210ENST00000562913 AATKQ6ZMQ8 1374 aa23.19■■□□□ 1.3
KLHDC4-210ENST00000562913 BARGINQ6ZT62 677 aa23.19■■□□□ 1.3
KLHDC4-210ENST00000562913 SOX12O15370 315 aa23.18■■□□□ 1.3
KLHDC4-210ENST00000562913 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
KLHDC4-210ENST00000562913 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
KLHDC4-210ENST00000562913 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
KLHDC4-210ENST00000562913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
KLHDC4-210ENST00000562913 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
KLHDC4-210ENST00000562913 COL18A1P39060 1754 aa23.17■■□□□ 1.3
KLHDC4-210ENST00000562913 KCNH5Q8NCM2 988 aa23.16■■□□□ 1.3
KLHDC4-210ENST00000562913 SRCAPQ6ZRS2 3230 aa23.16■■□□□ 1.3
KLHDC4-210ENST00000562913 TESK2Q96S53 571 aa23.15■■□□□ 1.3
KLHDC4-210ENST00000562913 RGPD1P0DJD0 1748 aa23.15■■□□□ 1.3
KLHDC4-210ENST00000562913 CRB1P82279 1406 aa23.15■■□□□ 1.3
KLHDC4-210ENST00000562913 BAG6P46379 1132 aa23.14■■□□□ 1.29
KLHDC4-210ENST00000562913 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
KLHDC4-210ENST00000562913 ARHGEF25Q86VW2 580 aa23.14■■□□□ 1.29
KLHDC4-210ENST00000562913 AXIN2Q9Y2T1 843 aa23.14■■□□□ 1.29
KLHDC4-210ENST00000562913 THRAP3Q9Y2W1 955 aaKnown RBP23.14■■□□□ 1.29
KLHDC4-210ENST00000562913 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
KLHDC4-210ENST00000562913 NFAT5O94916 1531 aa23.13■■□□□ 1.29
KLHDC4-210ENST00000562913 FAM196AQ6ZSG2 479 aa23.12■■□□□ 1.29
KLHDC4-210ENST00000562913 NME9Q86XW9 330 aa23.12■■□□□ 1.29
KLHDC4-210ENST00000562913 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
KLHDC4-210ENST00000562913 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
KLHDC4-210ENST00000562913 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms