RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
SF3B3-203ENST00000562874 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
SF3B3-203ENST00000562874 ATAD2Q6PL18 1390 aa22.71■■□□□ 1.23
SF3B3-203ENST00000562874 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
SF3B3-203ENST00000562874 PAK3O75914 559 aaPredicted RBP22.7■■□□□ 1.22
SF3B3-203ENST00000562874 GJD4Q96KN9 370 aaPredicted RBP22.7■■□□□ 1.22
SF3B3-203ENST00000562874 CENPJQ9HC77 1338 aaPredicted RBP22.7■■□□□ 1.22
SF3B3-203ENST00000562874 EP400Q96L91 3159 aa22.67■■□□□ 1.22
SF3B3-203ENST00000562874 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
SF3B3-203ENST00000562874 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
SF3B3-203ENST00000562874 ACEP12821 1306 aa22.65■■□□□ 1.22
SF3B3-203ENST00000562874 ROCK2O75116 1388 aaKnown RBP22.64■■□□□ 1.22
SF3B3-203ENST00000562874 SRPK2P78362 688 aaKnown RBP22.64■■□□□ 1.21
SF3B3-203ENST00000562874 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.21
SF3B3-203ENST00000562874 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
SF3B3-203ENST00000562874 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
SF3B3-203ENST00000562874 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
SF3B3-203ENST00000562874 CABP2Q9NPB3 220 aa22.63■■□□□ 1.21
SF3B3-203ENST00000562874 VPS72Q15906 364 aa22.61■■□□□ 1.21
SF3B3-203ENST00000562874 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
SF3B3-203ENST00000562874 THSD7AQ9UPZ6 1657 aa22.61■■□□□ 1.21
SF3B3-203ENST00000562874 MON2Q7Z3U7 1717 aa22.6■■□□□ 1.21
SF3B3-203ENST00000562874 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
SF3B3-203ENST00000562874 LMO7Q8WWI1 1683 aa22.6■■□□□ 1.21
SF3B3-203ENST00000562874 RGPD5Q99666 1765 aa22.58■■□□□ 1.21
SF3B3-203ENST00000562874 NBPF8Q3BBV2 869 aa22.58■■□□□ 1.21
SF3B3-203ENST00000562874 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
SF3B3-203ENST00000562874 PLEKHG3A1L390 1219 aa22.56■■□□□ 1.2
SF3B3-203ENST00000562874 PRDM11Q9NQV5 511 aa22.56■■□□□ 1.2
SF3B3-203ENST00000562874 WNK3Q9BYP7 1800 aa22.55■■□□□ 1.2
SF3B3-203ENST00000562874 RGPD1P0DJD0 1748 aa22.55■■□□□ 1.2
SF3B3-203ENST00000562874 SEPT12Q8IYM1 358 aa22.55■■□□□ 1.2
SF3B3-203ENST00000562874 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
SF3B3-203ENST00000562874 A0A0G2JS52 829 aa22.54■■□□□ 1.2
SF3B3-203ENST00000562874 MYT1Q01538 1121 aa22.54■■□□□ 1.2
SF3B3-203ENST00000562874 CHRNA2Q15822 529 aa22.54■■□□□ 1.2
SF3B3-203ENST00000562874 USP6P35125 1406 aa22.54■■□□□ 1.2
SF3B3-203ENST00000562874 TNS1Q9HBL0 1735 aaKnown RBP22.54■■□□□ 1.2
SF3B3-203ENST00000562874 ZC3H6P61129 1189 aaKnown RBP22.52■■□□□ 1.2
SF3B3-203ENST00000562874 FAM98CQ17RN3 349 aaKnown RBP22.51■■□□□ 1.19
SF3B3-203ENST00000562874 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
SF3B3-203ENST00000562874 CAMTA1Q9Y6Y1 1673 aa22.51■■□□□ 1.19
SF3B3-203ENST00000562874 EVC2Q86UK5 1308 aa22.51■■□□□ 1.19
SF3B3-203ENST00000562874 SLIT3O75094 1523 aa22.51■■□□□ 1.19
SF3B3-203ENST00000562874 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
SF3B3-203ENST00000562874 CABP1Q9NZU7 370 aa22.5■■□□□ 1.19
SF3B3-203ENST00000562874 USP19O94966 1318 aa22.5■■□□□ 1.19
SF3B3-203ENST00000562874 COL18A1P39060 1754 aa22.5■■□□□ 1.19
SF3B3-203ENST00000562874 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
SF3B3-203ENST00000562874 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
SF3B3-203ENST00000562874 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
SF3B3-203ENST00000562874 LTN1O94822 1766 aa22.48■■□□□ 1.19
SF3B3-203ENST00000562874 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
SF3B3-203ENST00000562874 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
SF3B3-203ENST00000562874 SSH2Q76I76 1423 aa22.46■■□□□ 1.19
SF3B3-203ENST00000562874 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
SF3B3-203ENST00000562874 PARP4Q9UKK3 1724 aaKnown RBP22.45■■□□□ 1.19
SF3B3-203ENST00000562874 ONECUT3O60422 494 aaPredicted RBP22.45■■□□□ 1.18
SF3B3-203ENST00000562874 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
SF3B3-203ENST00000562874 CPDO75976 1380 aa22.43■■□□□ 1.18
SF3B3-203ENST00000562874 COL5A2P05997 1499 aaPredicted RBP22.42■■□□□ 1.18
SF3B3-203ENST00000562874 BRD4O60885 1362 aaPredicted RBP22.42■■□□□ 1.18
SF3B3-203ENST00000562874 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
SF3B3-203ENST00000562874 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
SF3B3-203ENST00000562874 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
SF3B3-203ENST00000562874 SPATA31A1Q5TZJ5 1347 aa22.41■■□□□ 1.18
SF3B3-203ENST00000562874 FAM182BQ5T319 152 aa22.41■■□□□ 1.18
SF3B3-203ENST00000562874 LRRC37A3O60309 1634 aa22.41■■□□□ 1.18
SF3B3-203ENST00000562874 DEFB132Q7Z7B7 95 aa22.4■■□□□ 1.18
SF3B3-203ENST00000562874 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
SF3B3-203ENST00000562874 GCP02774 474 aa22.39■■□□□ 1.17
SF3B3-203ENST00000562874 NLRP6P59044 892 aa22.39■■□□□ 1.17
SF3B3-203ENST00000562874 CCDC125Q86Z20 511 aa22.39■■□□□ 1.17
SF3B3-203ENST00000562874 CPSF1Q10570 1443 aaKnown RBP22.39■■□□□ 1.17
SF3B3-203ENST00000562874 SBF2Q86WG5 1849 aa22.38■■□□□ 1.17
SF3B3-203ENST00000562874 NFAT5O94916 1531 aa22.38■■□□□ 1.17
SF3B3-203ENST00000562874 CD163L1Q9NR16 1453 aa22.38■■□□□ 1.17
SF3B3-203ENST00000562874 KTN1Q86UP2 1357 aaKnown RBP22.37■■□□□ 1.17
SF3B3-203ENST00000562874 TTC21BQ7Z4L5 1316 aa22.36■■□□□ 1.17
SF3B3-203ENST00000562874 EVA1CP58658 441 aa22.36■■□□□ 1.17
SF3B3-203ENST00000562874 LARP1Q6PKG0 1096 aaKnown RBP22.36■■□□□ 1.17
SF3B3-203ENST00000562874 SF3B2Q13435 895 aaKnown RBP22.35■■□□□ 1.17
SF3B3-203ENST00000562874 SOX12O15370 315 aa22.34■■□□□ 1.17
SF3B3-203ENST00000562874 RREB1Q92766 1687 aa22.33■■□□□ 1.16
SF3B3-203ENST00000562874 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
SF3B3-203ENST00000562874 ZRANB1Q9UGI0 708 aa22.31■■□□□ 1.16
SF3B3-203ENST00000562874 NUP188Q5SRE5 1749 aa22.31■■□□□ 1.16
SF3B3-203ENST00000562874 CRB1P82279 1406 aa22.31■■□□□ 1.16
SF3B3-203ENST00000562874 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
SF3B3-203ENST00000562874 AATKQ6ZMQ8 1374 aa22.3■■□□□ 1.16
SF3B3-203ENST00000562874 KIF20BQ96Q89 1820 aa22.29■■□□□ 1.16
SF3B3-203ENST00000562874 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
SF3B3-203ENST00000562874 ZNF692Q9BU19 519 aaPredicted RBP22.29■■□□□ 1.16
SF3B3-203ENST00000562874 MYOM1P52179 1685 aa22.28■■□□□ 1.16
SF3B3-203ENST00000562874 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.28■■□□□ 1.16
SF3B3-203ENST00000562874 A0A1W2PP64 1363 aa22.27■■□□□ 1.16
SF3B3-203ENST00000562874 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
SF3B3-203ENST00000562874 TCP11L2Q8N4U5 519 aa22.27■■□□□ 1.16
SF3B3-203ENST00000562874 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
SF3B3-203ENST00000562874 ABCC6O95255 1503 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms