RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 SMPD1P17405 629 aa10.63□□□□□ -0.71
CHD9-206ENST00000562791 CTHP32929 405 aa10.63□□□□□ -0.71
CHD9-206ENST00000562791 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
CHD9-206ENST00000562791 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
CHD9-206ENST00000562791 SNIP1Q8TAD8 396 aaKnown RBP10.63□□□□□ -0.71
CHD9-206ENST00000562791 BAP1Q92560 729 aa10.63□□□□□ -0.71
CHD9-206ENST00000562791 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
CHD9-206ENST00000562791 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHD9-206ENST00000562791 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
CHD9-206ENST00000562791 AVPP01185 164 aa10.61□□□□□ -0.71
CHD9-206ENST00000562791 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
CHD9-206ENST00000562791 SIAH2O43255 324 aa10.6□□□□□ -0.71
CHD9-206ENST00000562791 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
CHD9-206ENST00000562791 EHBP1Q8NDI1 1231 aa10.6□□□□□ -0.71
CHD9-206ENST00000562791 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
CHD9-206ENST00000562791 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
CHD9-206ENST00000562791 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
CHD9-206ENST00000562791 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
CHD9-206ENST00000562791 CRIPAKQ8N1N5 446 aa10.57□□□□□ -0.72
CHD9-206ENST00000562791 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
CHD9-206ENST00000562791 POTECB2RU33 542 aa10.56□□□□□ -0.72
CHD9-206ENST00000562791 HPS1Q92902 700 aa10.56□□□□□ -0.72
CHD9-206ENST00000562791 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
CHD9-206ENST00000562791 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
CHD9-206ENST00000562791 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
CHD9-206ENST00000562791 ZNF787Q6DD87 383 aa10.54□□□□□ -0.72
CHD9-206ENST00000562791 AXIN1O15169 862 aa10.53□□□□□ -0.72
CHD9-206ENST00000562791 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
CHD9-206ENST00000562791 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
CHD9-206ENST00000562791 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
CHD9-206ENST00000562791 LRRN4Q8WUT4 740 aa10.53□□□□□ -0.72
CHD9-206ENST00000562791 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
CHD9-206ENST00000562791 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
CHD9-206ENST00000562791 VARSP26640 1264 aaKnown RBP10.5□□□□□ -0.73
CHD9-206ENST00000562791 AP1G2O75843 785 aa10.48□□□□□ -0.73
CHD9-206ENST00000562791 RFC5P40937 340 aa10.47□□□□□ -0.73
CHD9-206ENST00000562791 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
CHD9-206ENST00000562791 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
CHD9-206ENST00000562791 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
CHD9-206ENST00000562791 NR6A1Q15406 480 aa10.46□□□□□ -0.73
CHD9-206ENST00000562791 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
CHD9-206ENST00000562791 HMX1Q9NP08 348 aaPredicted RBP10.46□□□□□ -0.73
CHD9-206ENST00000562791 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 AGERQ15109 404 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 NBPF14Q5TI25 921 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 FAM174AQ8TBP5 190 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 EPS8L1Q8TE68 723 aa10.45□□□□□ -0.74
CHD9-206ENST00000562791 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
CHD9-206ENST00000562791 BPHLQ86WA6 291 aaPredicted RBP10.44□□□□□ -0.74
CHD9-206ENST00000562791 MPNDQ8N594 471 aa10.44□□□□□ -0.74
CHD9-206ENST00000562791 ARMC2Q8NEN0 867 aa10.44□□□□□ -0.74
CHD9-206ENST00000562791 ATP13A2Q9NQ11 1180 aa10.44□□□□□ -0.74
CHD9-206ENST00000562791 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
CHD9-206ENST00000562791 NNTQ13423 1086 aa10.43□□□□□ -0.74
CHD9-206ENST00000562791 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
CHD9-206ENST00000562791 ARID5BQ14865 1188 aa10.42□□□□□ -0.74
CHD9-206ENST00000562791 CDK15Q96Q40 435 aa10.42□□□□□ -0.74
CHD9-206ENST00000562791 MAGEB6P1A0A0J9YX57 407 aa10.41□□□□□ -0.74
CHD9-206ENST00000562791 ADH1CP00326 375 aa10.41□□□□□ -0.74
CHD9-206ENST00000562791 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
CHD9-206ENST00000562791 FKBPLQ9UIM3 349 aa10.41□□□□□ -0.74
CHD9-206ENST00000562791 BMP1P13497 986 aa10.4□□□□□ -0.74
CHD9-206ENST00000562791 ZNF775Q96BV0 537 aaPredicted RBP10.4□□□□□ -0.74
CHD9-206ENST00000562791 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.754e-10■□□□□ 9.3
CHD9-206ENST00000562791 CAPN5O15484 640 aaPredicted RBP10.38□□□□□ -0.75
CHD9-206ENST00000562791 NR3C2P08235 984 aa10.38□□□□□ -0.75
CHD9-206ENST00000562791 GRM5P41594 1212 aa10.38□□□□□ -0.75
CHD9-206ENST00000562791 TRIM46Q7Z4K8 759 aa10.38□□□□□ -0.75
CHD9-206ENST00000562791 OCSTAMPQ9BR26 566 aa10.38□□□□□ -0.75
CHD9-206ENST00000562791 C11orf95C9JLR9 678 aaPredicted RBP10.37□□□□□ -0.75
CHD9-206ENST00000562791 TIMP2P16035 220 aa10.37□□□□□ -0.75
CHD9-206ENST00000562791 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
CHD9-206ENST00000562791 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
CHD9-206ENST00000562791 KLF16Q9BXK1 252 aaPredicted RBP10.37□□□□□ -0.75
CHD9-206ENST00000562791 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
CHD9-206ENST00000562791 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
CHD9-206ENST00000562791 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
CHD9-206ENST00000562791 FSHRP23945 695 aa10.35□□□□□ -0.75
CHD9-206ENST00000562791 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
CHD9-206ENST00000562791 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
CHD9-206ENST00000562791 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
CHD9-206ENST00000562791 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
CHD9-206ENST00000562791 MAP4K5Q9Y4K4 846 aa10.34□□□□□ -0.75
CHD9-206ENST00000562791 NR5A1Q13285 461 aa10.33□□□□□ -0.76
CHD9-206ENST00000562791 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
CHD9-206ENST00000562791 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
CHD9-206ENST00000562791 ITPKCQ96DU7 683 aa10.33□□□□□ -0.76
CHD9-206ENST00000562791 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
CHD9-206ENST00000562791 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
CHD9-206ENST00000562791 ZIC2O95409 532 aaPredicted RBP10.31□□□□□ -0.76
CHD9-206ENST00000562791 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
CHD9-206ENST00000562791 ZBTB33Q86T24 672 aa10.29□□□□□ -0.76
CHD9-206ENST00000562791 ADAM32Q8TC27 787 aa10.29□□□□□ -0.76
CHD9-206ENST00000562791 SLC10A4Q96EP9 437 aa10.29□□□□□ -0.76
CHD9-206ENST00000562791 PTK2Q05397 1052 aa10.28□□□□□ -0.76
CHD9-206ENST00000562791 MRPL14Q6P1L8 145 aaKnown RBP10.28□□□□□ -0.76
CHD9-206ENST00000562791 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
CHD9-206ENST00000562791 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
CHD9-206ENST00000562791 GPSM3Q9Y4H4 160 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms