RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
COMMD4-206ENST00000562610 PLEKHG3A1L390 1219 aa22.82■■□□□ 1.24
COMMD4-206ENST00000562610 CABLES1Q8TDN4 633 aa22.82■■□□□ 1.24
COMMD4-206ENST00000562610 NWD2Q9ULI1 1742 aa22.81■■□□□ 1.24
COMMD4-206ENST00000562610 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
COMMD4-206ENST00000562610 SOCS7O14512 581 aa22.8■■□□□ 1.24
COMMD4-206ENST00000562610 ATAD2Q6PL18 1390 aa22.79■■□□□ 1.24
COMMD4-206ENST00000562610 USP47Q96K76 1375 aa22.78■■□□□ 1.24
COMMD4-206ENST00000562610 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
COMMD4-206ENST00000562610 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
COMMD4-206ENST00000562610 COL14A1Q05707 1796 aaKnown RBP22.77■■□□□ 1.24
COMMD4-206ENST00000562610 USP21Q9UK80 565 aa22.77■■□□□ 1.24
COMMD4-206ENST00000562610 USP6P35125 1406 aa22.76■■□□□ 1.23
COMMD4-206ENST00000562610 PIK3C2AO00443 1686 aa22.76■■□□□ 1.23
COMMD4-206ENST00000562610 ST20-MTHFSA0A0A6YYL1 179 aa22.75■■□□□ 1.23
COMMD4-206ENST00000562610 NRAPQ86VF7 1730 aa22.74■■□□□ 1.23
COMMD4-206ENST00000562610 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
COMMD4-206ENST00000562610 QTRT2Q9H974 415 aaKnown RBP22.73■■□□□ 1.23
COMMD4-206ENST00000562610 SLIT2O94813 1529 aa22.72■■□□□ 1.23
COMMD4-206ENST00000562610 RXRBP28702 533 aa22.72■■□□□ 1.23
COMMD4-206ENST00000562610 NUTM2GQ5VZR2 741 aa22.72■■□□□ 1.23
COMMD4-206ENST00000562610 BCL9LQ86UU0 1499 aa22.72■■□□□ 1.23
COMMD4-206ENST00000562610 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
COMMD4-206ENST00000562610 ABTB2Q8N961 1025 aa22.7■■□□□ 1.22
COMMD4-206ENST00000562610 TESK2Q96S53 571 aa22.7■■□□□ 1.22
COMMD4-206ENST00000562610 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
COMMD4-206ENST00000562610 ATRNO75882 1429 aa22.7■■□□□ 1.22
COMMD4-206ENST00000562610 CDK12Q9NYV4 1490 aaPredicted RBP22.7■■□□□ 1.22
COMMD4-206ENST00000562610 TMC1Q8TDI8 760 aa22.68■■□□□ 1.22
COMMD4-206ENST00000562610 RGS12O14924 1447 aa22.67■■□□□ 1.22
COMMD4-206ENST00000562610 CPSF1Q10570 1443 aaKnown RBP22.67■■□□□ 1.22
COMMD4-206ENST00000562610 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
COMMD4-206ENST00000562610 RBM6P78332 1123 aaKnown RBP22.67■■□□□ 1.22
COMMD4-206ENST00000562610 GLI3P10071 1580 aa22.66■■□□□ 1.22
COMMD4-206ENST00000562610 SSH2Q76I76 1423 aa22.65■■□□□ 1.22
COMMD4-206ENST00000562610 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
COMMD4-206ENST00000562610 CD163L1Q9NR16 1453 aa22.65■■□□□ 1.22
COMMD4-206ENST00000562610 UNC5CLQ8IV45 518 aa22.64■■□□□ 1.21
COMMD4-206ENST00000562610 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
COMMD4-206ENST00000562610 PRDM11Q9NQV5 511 aa22.64■■□□□ 1.21
COMMD4-206ENST00000562610 MYOM1P52179 1685 aa22.64■■□□□ 1.21
COMMD4-206ENST00000562610 KIAA0232Q92628 1395 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 USP19O94966 1318 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 SLIT3O75094 1523 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 USP54Q70EL1 1684 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 NLRP13Q86W25 1043 aa22.63■■□□□ 1.21
COMMD4-206ENST00000562610 TMF1P82094 1093 aa22.62■■□□□ 1.21
COMMD4-206ENST00000562610 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
COMMD4-206ENST00000562610 TTC21BQ7Z4L5 1316 aa22.61■■□□□ 1.21
COMMD4-206ENST00000562610 NLRP6P59044 892 aa22.61■■□□□ 1.21
COMMD4-206ENST00000562610 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-206ENST00000562610 PUS7Q96PZ0 661 aaKnown RBP22.61■■□□□ 1.21
COMMD4-206ENST00000562610 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
COMMD4-206ENST00000562610 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
COMMD4-206ENST00000562610 BRWD3Q6RI45 1802 aa22.6■■□□□ 1.21
COMMD4-206ENST00000562610 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
COMMD4-206ENST00000562610 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
COMMD4-206ENST00000562610 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
COMMD4-206ENST00000562610 A0A1W2PP64 1363 aa22.6■■□□□ 1.21
COMMD4-206ENST00000562610 CCDC9Q9Y3X0 531 aaKnown RBP22.59■■□□□ 1.21
COMMD4-206ENST00000562610 CHRNA2Q15822 529 aa22.58■■□□□ 1.21
COMMD4-206ENST00000562610 GJD4Q96KN9 370 aaPredicted RBP22.58■■□□□ 1.21
COMMD4-206ENST00000562610 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
COMMD4-206ENST00000562610 LTN1O94822 1766 aa22.58■■□□□ 1.2
COMMD4-206ENST00000562610 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
COMMD4-206ENST00000562610 KIF20BQ96Q89 1820 aa22.57■■□□□ 1.2
COMMD4-206ENST00000562610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
COMMD4-206ENST00000562610 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
COMMD4-206ENST00000562610 VPS72Q15906 364 aa22.56■■□□□ 1.2
COMMD4-206ENST00000562610 CPDO75976 1380 aa22.55■■□□□ 1.2
COMMD4-206ENST00000562610 GCP02774 474 aa22.55■■□□□ 1.2
COMMD4-206ENST00000562610 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
COMMD4-206ENST00000562610 CDCA8Q53HL2 280 aa22.54■■□□□ 1.2
COMMD4-206ENST00000562610 COL18A1P39060 1754 aa22.53■■□□□ 1.2
COMMD4-206ENST00000562610 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
COMMD4-206ENST00000562610 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
COMMD4-206ENST00000562610 NFAT5O94916 1531 aa22.52■■□□□ 1.2
COMMD4-206ENST00000562610 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
COMMD4-206ENST00000562610 SOX12O15370 315 aa22.51■■□□□ 1.19
COMMD4-206ENST00000562610 NME9Q86XW9 330 aa22.51■■□□□ 1.19
COMMD4-206ENST00000562610 STRN4Q9NRL3 753 aa22.51■■□□□ 1.19
COMMD4-206ENST00000562610 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
COMMD4-206ENST00000562610 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
COMMD4-206ENST00000562610 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
COMMD4-206ENST00000562610 USP31Q70CQ4 1352 aa22.48■■□□□ 1.19
COMMD4-206ENST00000562610 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
COMMD4-206ENST00000562610 THSD7AQ9UPZ6 1657 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 A0A0G2JS52 829 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 MYT1Q01538 1121 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 WNK3Q9BYP7 1800 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
COMMD4-206ENST00000562610 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
COMMD4-206ENST00000562610 EVA1CP58658 441 aa22.45■■□□□ 1.18
COMMD4-206ENST00000562610 SPATA31A5Q5VU36 1347 aa22.45■■□□□ 1.18
COMMD4-206ENST00000562610 SPATA31A7Q8IWB4 1347 aa22.45■■□□□ 1.18
COMMD4-206ENST00000562610 ABCC6O95255 1503 aa22.44■■□□□ 1.18
COMMD4-206ENST00000562610 FAM98CQ17RN3 349 aaKnown RBP22.44■■□□□ 1.18
COMMD4-206ENST00000562610 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms