RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 SPHKAPQ2M3C7 1700 aa10.7□□□□□ -0.7
SNX29-201ENST00000562510 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
SNX29-201ENST00000562510 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
SNX29-201ENST00000562510 UGGT1Q9NYU2 1555 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 LRRC7Q96NW7 1537 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 RGL3Q3MIN7 710 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
SNX29-201ENST00000562510 RGS17Q9UGC6 210 aaPredicted RBP10.69□□□□□ -0.7
SNX29-201ENST00000562510 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
SNX29-201ENST00000562510 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
SNX29-201ENST00000562510 DCAF11Q8TEB1 546 aa10.68□□□□□ -0.7
SNX29-201ENST00000562510 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
SNX29-201ENST00000562510 CLTCL1P53675 1640 aa10.68□□□□□ -0.7
SNX29-201ENST00000562510 ALKQ9UM73 1620 aa10.68□□□□□ -0.7
SNX29-201ENST00000562510 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
SNX29-201ENST00000562510 SLC34A2O95436 690 aa10.66□□□□□ -0.7
SNX29-201ENST00000562510 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNX29-201ENST00000562510 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
SNX29-201ENST00000562510 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
SNX29-201ENST00000562510 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
SNX29-201ENST00000562510 MFSD10Q14728 455 aa10.65□□□□□ -0.7
SNX29-201ENST00000562510 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
SNX29-201ENST00000562510 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNX29-201ENST00000562510 ERVK-7P63135 1459 aa10.65□□□□□ -0.7
SNX29-201ENST00000562510 FAM135BQ49AJ0 1406 aa10.65□□□□□ -0.7
SNX29-201ENST00000562510 SYNMO15061 1565 aa10.65□□□□□ -0.71
SNX29-201ENST00000562510 IDI1Q13907 227 aa10.64□□□□□ -0.71
SNX29-201ENST00000562510 TXNDC2Q86VQ3 553 aa10.64□□□□□ -0.71
SNX29-201ENST00000562510 WDR70Q9NW82 654 aa10.64□□□□□ -0.71
SNX29-201ENST00000562510 EID1Q9Y6B2 187 aa10.64□□□□□ -0.71
SNX29-201ENST00000562510 PIK3C2BO00750 1634 aa10.63□□□□□ -0.71
SNX29-201ENST00000562510 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
SNX29-201ENST00000562510 TBC1D12O60347 775 aa10.63□□□□□ -0.71
SNX29-201ENST00000562510 LTKP29376 864 aa10.63□□□□□ -0.71
SNX29-201ENST00000562510 CFAP65Q6ZU64 1925 aaKnown RBP10.62□□□□□ -0.71
SNX29-201ENST00000562510 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
SNX29-201ENST00000562510 ERBB3P21860 1342 aa10.62□□□□□ -0.71
SNX29-201ENST00000562510 POLR1AO95602 1720 aaPredicted RBP10.62□□□□□ -0.71
SNX29-201ENST00000562510 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
SNX29-201ENST00000562510 NUDT7P0C024 238 aa10.62□□□□□ -0.71
SNX29-201ENST00000562510 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
SNX29-201ENST00000562510 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
SNX29-201ENST00000562510 POTEAQ6S8J7 498 aa10.61□□□□□ -0.71
SNX29-201ENST00000562510 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
SNX29-201ENST00000562510 ADGRB3O60242 1522 aa10.61□□□□□ -0.71
SNX29-201ENST00000562510 KIF1BO60333 1816 aa10.61□□□□□ -0.71
SNX29-201ENST00000562510 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
SNX29-201ENST00000562510 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
SNX29-201ENST00000562510 ARHGAP23Q9P227 1491 aa10.6□□□□□ -0.71
SNX29-201ENST00000562510 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
SNX29-201ENST00000562510 KCNA6P17658 529 aa10.59□□□□□ -0.71
SNX29-201ENST00000562510 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX29-201ENST00000562510 MYOM2P54296 1465 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 TMEM94Q12767 1356 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 HSPA5P11021 654 aaKnown RBP10.58□□□□□ -0.72
SNX29-201ENST00000562510 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 SLIT1O75093 1534 aa10.58□□□□□ -0.72
SNX29-201ENST00000562510 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
SNX29-201ENST00000562510 NBPF1Q3BBV0 1214 aa10.57□□□□□ -0.72
SNX29-201ENST00000562510 VARS2Q5ST30 1063 aaKnown RBP10.57□□□□□ -0.72
SNX29-201ENST00000562510 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
SNX29-201ENST00000562510 NRXN1Q9ULB1 1477 aa10.56□□□□□ -0.72
SNX29-201ENST00000562510 TMEM131LA2VDJ0 1609 aa10.56□□□□□ -0.72
SNX29-201ENST00000562510 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
SNX29-201ENST00000562510 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
SNX29-201ENST00000562510 HIRIP3Q9BW71 556 aaPredicted RBP10.56□□□□□ -0.72
SNX29-201ENST00000562510 CARD11Q9BXL7 1154 aa10.56□□□□□ -0.72
SNX29-201ENST00000562510 ROCK2O75116 1388 aaKnown RBP10.55□□□□□ -0.72
SNX29-201ENST00000562510 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
SNX29-201ENST00000562510 ZFYVE9O95405 1425 aa10.55□□□□□ -0.72
SNX29-201ENST00000562510 TRPM1Q7Z4N2 1603 aa10.55□□□□□ -0.72
SNX29-201ENST00000562510 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
SNX29-201ENST00000562510 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
SNX29-201ENST00000562510 IFT172Q9UG01 1749 aa10.54□□□□□ -0.72
SNX29-201ENST00000562510 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
SNX29-201ENST00000562510 USP47Q96K76 1375 aa10.53□□□□□ -0.72
SNX29-201ENST00000562510 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
SNX29-201ENST00000562510 JCADQ9P266 1359 aa10.52□□□□□ -0.72
SNX29-201ENST00000562510 PPLO60437 1756 aa10.52□□□□□ -0.72
SNX29-201ENST00000562510 PIK3C2GO75747 1445 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 E2F4Q16254 413 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 SLC26A8Q96RN1 970 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 C14orf93Q9H972 538 aaKnown RBP10.52□□□□□ -0.73
SNX29-201ENST00000562510 STRCP1A6NGW2 1772 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 MSH6P52701 1360 aa10.52□□□□□ -0.73
SNX29-201ENST00000562510 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
SNX29-201ENST00000562510 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
SNX29-201ENST00000562510 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
SNX29-201ENST00000562510 DIEXFQ68CQ4 756 aaKnown RBP10.51□□□□□ -0.73
SNX29-201ENST00000562510 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
SNX29-201ENST00000562510 LAMC1P11047 1609 aa10.51□□□□□ -0.73
SNX29-201ENST00000562510 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
SNX29-201ENST00000562510 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
SNX29-201ENST00000562510 ST20-MTHFSA0A0A6YYL1 179 aa10.5□□□□□ -0.73
SNX29-201ENST00000562510 DPYSL4O14531 572 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms