RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 RGS17Q9UGC6 210 aaPredicted RBP15.45■□□□□ 0.06
SNAPC5-204ENST00000562411 MYOM1P52179 1685 aa15.44■□□□□ 0.06
SNAPC5-204ENST00000562411 USP6P35125 1406 aa15.44■□□□□ 0.06
SNAPC5-204ENST00000562411 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
SNAPC5-204ENST00000562411 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
SNAPC5-204ENST00000562411 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
SNAPC5-204ENST00000562411 AFF2P51816 1311 aa15.43■□□□□ 0.06
SNAPC5-204ENST00000562411 PLEKHG3A1L390 1219 aa15.43■□□□□ 0.06
SNAPC5-204ENST00000562411 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
SNAPC5-204ENST00000562411 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
SNAPC5-204ENST00000562411 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
SNAPC5-204ENST00000562411 COL14A1Q05707 1796 aaKnown RBP15.41■□□□□ 0.06
SNAPC5-204ENST00000562411 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
SNAPC5-204ENST00000562411 TESK2Q96S53 571 aa15.41■□□□□ 0.06
SNAPC5-204ENST00000562411 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
SNAPC5-204ENST00000562411 CD163L1Q9NR16 1453 aa15.4■□□□□ 0.06
SNAPC5-204ENST00000562411 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
SNAPC5-204ENST00000562411 USP54Q70EL1 1684 aa15.38■□□□□ 0.05
SNAPC5-204ENST00000562411 CPSF1Q10570 1443 aaKnown RBP15.38■□□□□ 0.05
SNAPC5-204ENST00000562411 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
SNAPC5-204ENST00000562411 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
SNAPC5-204ENST00000562411 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
SNAPC5-204ENST00000562411 KTN1Q86UP2 1357 aaKnown RBP15.37■□□□□ 0.05
SNAPC5-204ENST00000562411 SLIT3O75094 1523 aa15.37■□□□□ 0.05
SNAPC5-204ENST00000562411 SLIT2O94813 1529 aa15.37■□□□□ 0.05
SNAPC5-204ENST00000562411 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
SNAPC5-204ENST00000562411 TMF1P82094 1093 aa15.36■□□□□ 0.05
SNAPC5-204ENST00000562411 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
SNAPC5-204ENST00000562411 A0A1W2PP64 1363 aa15.36■□□□□ 0.05
SNAPC5-204ENST00000562411 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
SNAPC5-204ENST00000562411 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
SNAPC5-204ENST00000562411 ATRNO75882 1429 aa15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 BCL9LQ86UU0 1499 aa15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 USP21Q9UK80 565 aa15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 USP19O94966 1318 aa15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 EDC4Q6P2E9 1401 aaKnown RBP15.34■□□□□ 0.05
SNAPC5-204ENST00000562411 GLI3P10071 1580 aa15.33■□□□□ 0.05
SNAPC5-204ENST00000562411 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
SNAPC5-204ENST00000562411 RGS12O14924 1447 aa15.33■□□□□ 0.04
SNAPC5-204ENST00000562411 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
SNAPC5-204ENST00000562411 HSPA5P11021 654 aaKnown RBP15.32■□□□□ 0.04
SNAPC5-204ENST00000562411 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
SNAPC5-204ENST00000562411 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
SNAPC5-204ENST00000562411 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
SNAPC5-204ENST00000562411 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 PUS7Q96PZ0 661 aaKnown RBP15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 TTC21AQ8NDW8 1320 aa15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 CDK12Q9NYV4 1490 aaPredicted RBP15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 LTN1O94822 1766 aa15.31■□□□□ 0.04
SNAPC5-204ENST00000562411 NFAT5O94916 1531 aa15.3■□□□□ 0.04
SNAPC5-204ENST00000562411 ANKRD36BQ8N2N9 1353 aa15.3■□□□□ 0.04
SNAPC5-204ENST00000562411 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
SNAPC5-204ENST00000562411 PRDM11Q9NQV5 511 aa15.3■□□□□ 0.04
SNAPC5-204ENST00000562411 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
SNAPC5-204ENST00000562411 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
SNAPC5-204ENST00000562411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNAPC5-204ENST00000562411 RXRBP28702 533 aa15.28■□□□□ 0.04
SNAPC5-204ENST00000562411 NLRP6P59044 892 aa15.28■□□□□ 0.04
SNAPC5-204ENST00000562411 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
SNAPC5-204ENST00000562411 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
SNAPC5-204ENST00000562411 TRPC5Q9UL62 973 aaPredicted RBP15.28■□□□□ 0.04
SNAPC5-204ENST00000562411 ZC3H6P61129 1189 aaKnown RBP15.27■□□□□ 0.04
SNAPC5-204ENST00000562411 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
SNAPC5-204ENST00000562411 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
SNAPC5-204ENST00000562411 OVOS2A0A0J9YW53 1432 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 OVOS2Q6IE36 1432 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 CPDO75976 1380 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 CHRNA2Q15822 529 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 NME9Q86XW9 330 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 COL18A1P39060 1754 aa15.26■□□□□ 0.03
SNAPC5-204ENST00000562411 WNK3Q9BYP7 1800 aa15.25■□□□□ 0.03
SNAPC5-204ENST00000562411 SOX12O15370 315 aa15.25■□□□□ 0.03
SNAPC5-204ENST00000562411 ANKRD26Q9UPS8 1709 aa15.25■□□□□ 0.03
SNAPC5-204ENST00000562411 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
SNAPC5-204ENST00000562411 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 ABCC6O95255 1503 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 GCP02774 474 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 CCDC9Q9Y3X0 531 aaKnown RBP15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
SNAPC5-204ENST00000562411 THSD7AQ9UPZ6 1657 aa15.23■□□□□ 0.03
SNAPC5-204ENST00000562411 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
SNAPC5-204ENST00000562411 VPS72Q15906 364 aa15.21■□□□□ 0.03
SNAPC5-204ENST00000562411 GJD4Q96KN9 370 aaPredicted RBP15.21■□□□□ 0.03
SNAPC5-204ENST00000562411 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
SNAPC5-204ENST00000562411 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
SNAPC5-204ENST00000562411 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
SNAPC5-204ENST00000562411 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
SNAPC5-204ENST00000562411 A0A0G2JS52 829 aa15.17■□□□□ 0.02
SNAPC5-204ENST00000562411 MYT1Q01538 1121 aa15.17■□□□□ 0.02
SNAPC5-204ENST00000562411 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms