RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 POLR3AO14802 1390 aaPredicted RBP29.96■■■□□ 2.39
NR4A1-219ENST00000562373 BCL9LQ86UU0 1499 aa29.95■■■□□ 2.39
NR4A1-219ENST00000562373 TRPC5Q9UL62 973 aaPredicted RBP29.95■■■□□ 2.39
NR4A1-219ENST00000562373 ABCA3Q99758 1704 aa29.91■■■□□ 2.38
NR4A1-219ENST00000562373 FAM83GA6ND36 823 aa29.91■■■□□ 2.38
NR4A1-219ENST00000562373 ATRNO75882 1429 aa29.9■■■□□ 2.38
NR4A1-219ENST00000562373 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.38
NR4A1-219ENST00000562373 SLIT2O94813 1529 aa29.88■■■□□ 2.37
NR4A1-219ENST00000562373 RGS12O14924 1447 aa29.87■■■□□ 2.37
NR4A1-219ENST00000562373 ABTB2Q8N961 1025 aa29.86■■■□□ 2.37
NR4A1-219ENST00000562373 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
NR4A1-219ENST00000562373 GJD4Q96KN9 370 aaPredicted RBP29.84■■■□□ 2.37
NR4A1-219ENST00000562373 CDK12Q9NYV4 1490 aaPredicted RBP29.84■■■□□ 2.37
NR4A1-219ENST00000562373 ST20-MTHFSA0A0A6YYL1 179 aa29.81■■■□□ 2.36
NR4A1-219ENST00000562373 ZC3H6P61129 1189 aaKnown RBP29.81■■■□□ 2.36
NR4A1-219ENST00000562373 CRYBG1Q9Y4K1 1723 aa29.81■■■□□ 2.36
NR4A1-219ENST00000562373 BTG4Q9NY30 223 aa29.8■■■□□ 2.36
NR4A1-219ENST00000562373 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
NR4A1-219ENST00000562373 CHRNA2Q15822 529 aa29.79■■■□□ 2.36
NR4A1-219ENST00000562373 CCDC9Q9Y3X0 531 aaKnown RBP29.79■■■□□ 2.36
NR4A1-219ENST00000562373 USP6P35125 1406 aa29.79■■■□□ 2.36
NR4A1-219ENST00000562373 PLCH1Q4KWH8 1693 aa29.79■■■□□ 2.36
NR4A1-219ENST00000562373 SBNO2Q9Y2G9 1366 aa29.78■■■□□ 2.36
NR4A1-219ENST00000562373 PRDM11Q9NQV5 511 aa29.77■■■□□ 2.36
NR4A1-219ENST00000562373 UPF1Q92900 1129 aaKnown RBP eCLIP29.76■■■□□ 2.35
NR4A1-219ENST00000562373 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.76■■■□□ 2.35
NR4A1-219ENST00000562373 ATAD2Q6PL18 1390 aa29.76■■■□□ 2.35
NR4A1-219ENST00000562373 KIAA0232Q92628 1395 aa29.76■■■□□ 2.35
NR4A1-219ENST00000562373 VPS72Q15906 364 aa29.75■■■□□ 2.35
NR4A1-219ENST00000562373 TMC1Q8TDI8 760 aa29.75■■■□□ 2.35
NR4A1-219ENST00000562373 TESK2Q96S53 571 aa29.75■■■□□ 2.35
NR4A1-219ENST00000562373 NLRP13Q86W25 1043 aa29.74■■■□□ 2.35
NR4A1-219ENST00000562373 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
NR4A1-219ENST00000562373 PHRF1Q9P1Y6 1649 aaKnown RBP29.74■■■□□ 2.35
NR4A1-219ENST00000562373 GLI3P10071 1580 aa29.73■■■□□ 2.35
NR4A1-219ENST00000562373 NLRP6P59044 892 aa29.73■■■□□ 2.35
NR4A1-219ENST00000562373 ZNF692Q9BU19 519 aaPredicted RBP29.73■■■□□ 2.35
NR4A1-219ENST00000562373 SLC12A5Q9H2X9 1139 aa29.72■■■□□ 2.35
NR4A1-219ENST00000562373 SSH2Q76I76 1423 aa29.71■■■□□ 2.35
NR4A1-219ENST00000562373 NWD2Q9ULI1 1742 aa29.71■■■□□ 2.35
NR4A1-219ENST00000562373 COL14A1Q05707 1796 aaKnown RBP29.71■■■□□ 2.35
NR4A1-219ENST00000562373 USP19O94966 1318 aa29.71■■■□□ 2.35
NR4A1-219ENST00000562373 TTC21BQ7Z4L5 1316 aa29.71■■■□□ 2.35
NR4A1-219ENST00000562373 GCP02774 474 aa29.7■■■□□ 2.35
NR4A1-219ENST00000562373 BRD4O60885 1362 aaPredicted RBP29.69■■■□□ 2.34
NR4A1-219ENST00000562373 KTN1Q86UP2 1357 aaKnown RBP29.68■■■□□ 2.34
NR4A1-219ENST00000562373 USP47Q96K76 1375 aa29.68■■■□□ 2.34
NR4A1-219ENST00000562373 CPSF1Q10570 1443 aaKnown RBP29.68■■■□□ 2.34
NR4A1-219ENST00000562373 AKAP12Q02952 1782 aa29.67■■■□□ 2.34
NR4A1-219ENST00000562373 ZBTB7CA1YPR0 619 aa29.67■■■□□ 2.34
NR4A1-219ENST00000562373 NRAPQ86VF7 1730 aa29.67■■■□□ 2.34
NR4A1-219ENST00000562373 STRN4Q9NRL3 753 aa29.66■■■□□ 2.34
NR4A1-219ENST00000562373 NRKQ7Z2Y5 1582 aa29.65■■■□□ 2.34
NR4A1-219ENST00000562373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.65■■■□□ 2.34
NR4A1-219ENST00000562373 ZRANB1Q9UGI0 708 aa29.65■■■□□ 2.34
NR4A1-219ENST00000562373 SEPT12Q8IYM1 358 aa29.64■■■□□ 2.34
NR4A1-219ENST00000562373 PIK3C2AO00443 1686 aa29.63■■■□□ 2.33
NR4A1-219ENST00000562373 CD163L1Q9NR16 1453 aa29.63■■■□□ 2.33
NR4A1-219ENST00000562373 SOX12O15370 315 aa29.62■■■□□ 2.33
NR4A1-219ENST00000562373 FAM98CQ17RN3 349 aaKnown RBP29.62■■■□□ 2.33
NR4A1-219ENST00000562373 A0A0G2JS52 829 aa29.6■■■□□ 2.33
NR4A1-219ENST00000562373 MYT1Q01538 1121 aa29.6■■■□□ 2.33
NR4A1-219ENST00000562373 HDGFL2Q7Z4V5 671 aaPredicted RBP29.6■■■□□ 2.33
NR4A1-219ENST00000562373 PUS7Q96PZ0 661 aaKnown RBP29.6■■■□□ 2.33
NR4A1-219ENST00000562373 SPATA31A5Q5VU36 1347 aa29.6■■■□□ 2.33
NR4A1-219ENST00000562373 SPATA31A7Q8IWB4 1347 aa29.6■■■□□ 2.33
NR4A1-219ENST00000562373 ONECUT3O60422 494 aaPredicted RBP29.59■■■□□ 2.33
NR4A1-219ENST00000562373 EVA1CP58658 441 aa29.59■■■□□ 2.33
NR4A1-219ENST00000562373 TTC21AQ8NDW8 1320 aa29.59■■■□□ 2.33
NR4A1-219ENST00000562373 CPDO75976 1380 aa29.58■■■□□ 2.33
NR4A1-219ENST00000562373 NME9Q86XW9 330 aa29.58■■■□□ 2.33
NR4A1-219ENST00000562373 CAMTA1Q9Y6Y1 1673 aa29.57■■■□□ 2.32
NR4A1-219ENST00000562373 TMF1P82094 1093 aa29.57■■■□□ 2.32
NR4A1-219ENST00000562373 BRWD3Q6RI45 1802 aa29.57■■■□□ 2.32
NR4A1-219ENST00000562373 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
NR4A1-219ENST00000562373 SLIT3O75094 1523 aa29.55■■■□□ 2.32
NR4A1-219ENST00000562373 A0A1W2PP64 1363 aa29.55■■■□□ 2.32
NR4A1-219ENST00000562373 LARP1Q6PKG0 1096 aaKnown RBP29.55■■■□□ 2.32
NR4A1-219ENST00000562373 TERF2IPQ9NYB0 399 aa29.55■■■□□ 2.32
NR4A1-219ENST00000562373 USP35Q9P2H5 1018 aa29.55■■■□□ 2.32
NR4A1-219ENST00000562373 SPATA31A1Q5TZJ5 1347 aa29.53■■■□□ 2.32
NR4A1-219ENST00000562373 SLC24A1O60721 1099 aa29.53■■■□□ 2.32
NR4A1-219ENST00000562373 LMO7Q8WWI1 1683 aa29.5■■■□□ 2.31
NR4A1-219ENST00000562373 KRT27Q7Z3Y8 459 aa29.5■■■□□ 2.31
NR4A1-219ENST00000562373 AXIN2Q9Y2T1 843 aa29.5■■■□□ 2.31
NR4A1-219ENST00000562373 ARHGEF25Q86VW2 580 aa29.49■■■□□ 2.31
NR4A1-219ENST00000562373 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
NR4A1-219ENST00000562373 EDC4Q6P2E9 1401 aaKnown RBP29.47■■■□□ 2.31
NR4A1-219ENST00000562373 FAM182BQ5T319 152 aa29.47■■■□□ 2.31
NR4A1-219ENST00000562373 AATKQ6ZMQ8 1374 aa29.46■■■□□ 2.31
NR4A1-219ENST00000562373 USP31Q70CQ4 1352 aa29.46■■■□□ 2.31
NR4A1-219ENST00000562373 COL5A2P05997 1499 aaPredicted RBP29.44■■■□□ 2.3
NR4A1-219ENST00000562373 NINLQ9Y2I6 1382 aa29.44■■■□□ 2.3
NR4A1-219ENST00000562373 HSPA5P11021 654 aaKnown RBP29.43■■■□□ 2.3
NR4A1-219ENST00000562373 COL18A1P39060 1754 aa29.43■■■□□ 2.3
NR4A1-219ENST00000562373 POLR3GLQ9BT43 218 aa29.41■■■□□ 2.3
NR4A1-219ENST00000562373 NFAT5O94916 1531 aa29.4■■■□□ 2.3
NR4A1-219ENST00000562373 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
NR4A1-219ENST00000562373 TCP11L2Q8N4U5 519 aa29.4■■■□□ 2.3
NR4A1-219ENST00000562373 ANKRD36BQ8N2N9 1353 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms