RNA–Protein interactions for RNA: ENST00000562174.5

EDC3-204, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-204ENST00000562174 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
EDC3-204ENST00000562174 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
EDC3-204ENST00000562174 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
EDC3-204ENST00000562174 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
EDC3-204ENST00000562174 EP400Q96L91 3159 aa16.97■□□□□ 0.31
EDC3-204ENST00000562174 ACEP12821 1306 aa16.97■□□□□ 0.31
EDC3-204ENST00000562174 PPIP5K1Q6PFW1 1433 aa16.97■□□□□ 0.31
EDC3-204ENST00000562174 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
EDC3-204ENST00000562174 GLI3P10071 1580 aa16.97■□□□□ 0.31
EDC3-204ENST00000562174 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
EDC3-204ENST00000562174 VPS72Q15906 364 aa16.96■□□□□ 0.31
EDC3-204ENST00000562174 COL14A1Q05707 1796 aaKnown RBP16.96■□□□□ 0.31
EDC3-204ENST00000562174 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
EDC3-204ENST00000562174 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
EDC3-204ENST00000562174 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
EDC3-204ENST00000562174 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
EDC3-204ENST00000562174 CABP2Q9NPB3 220 aa16.94■□□□□ 0.3
EDC3-204ENST00000562174 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
EDC3-204ENST00000562174 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
EDC3-204ENST00000562174 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
EDC3-204ENST00000562174 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
EDC3-204ENST00000562174 BTG4Q9NY30 223 aa16.92■□□□□ 0.3
EDC3-204ENST00000562174 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
EDC3-204ENST00000562174 KIAA0232Q92628 1395 aa16.9■□□□□ 0.3
EDC3-204ENST00000562174 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
EDC3-204ENST00000562174 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.3
EDC3-204ENST00000562174 A0A0G2JS52 829 aa16.89■□□□□ 0.29
EDC3-204ENST00000562174 MYT1Q01538 1121 aa16.89■□□□□ 0.29
EDC3-204ENST00000562174 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
EDC3-204ENST00000562174 USP6P35125 1406 aa16.88■□□□□ 0.29
EDC3-204ENST00000562174 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
EDC3-204ENST00000562174 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
EDC3-204ENST00000562174 USP19O94966 1318 aa16.88■□□□□ 0.29
EDC3-204ENST00000562174 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
EDC3-204ENST00000562174 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
EDC3-204ENST00000562174 ZC3H6P61129 1189 aaKnown RBP16.85■□□□□ 0.29
EDC3-204ENST00000562174 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
EDC3-204ENST00000562174 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
EDC3-204ENST00000562174 CPDO75976 1380 aa16.85■□□□□ 0.29
EDC3-204ENST00000562174 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
EDC3-204ENST00000562174 FAM98CQ17RN3 349 aaKnown RBP16.84■□□□□ 0.29
EDC3-204ENST00000562174 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
EDC3-204ENST00000562174 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
EDC3-204ENST00000562174 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
EDC3-204ENST00000562174 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
EDC3-204ENST00000562174 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
EDC3-204ENST00000562174 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
EDC3-204ENST00000562174 SLIT3O75094 1523 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 GCP02774 474 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 NLRP6P59044 892 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
EDC3-204ENST00000562174 PIK3C2AO00443 1686 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 THSD7AQ9UPZ6 1657 aa16.8■□□□□ 0.28
EDC3-204ENST00000562174 LMO7Q8WWI1 1683 aa16.79■□□□□ 0.28
EDC3-204ENST00000562174 SPATA31A1Q5TZJ5 1347 aa16.79■□□□□ 0.28
EDC3-204ENST00000562174 EVA1CP58658 441 aa16.79■□□□□ 0.28
EDC3-204ENST00000562174 SF3B2Q13435 895 aaKnown RBP16.79■□□□□ 0.28
EDC3-204ENST00000562174 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
EDC3-204ENST00000562174 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
EDC3-204ENST00000562174 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
EDC3-204ENST00000562174 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
EDC3-204ENST00000562174 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
EDC3-204ENST00000562174 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
EDC3-204ENST00000562174 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
EDC3-204ENST00000562174 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
EDC3-204ENST00000562174 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
EDC3-204ENST00000562174 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
EDC3-204ENST00000562174 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
EDC3-204ENST00000562174 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
EDC3-204ENST00000562174 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
EDC3-204ENST00000562174 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
EDC3-204ENST00000562174 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
EDC3-204ENST00000562174 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
EDC3-204ENST00000562174 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
EDC3-204ENST00000562174 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
EDC3-204ENST00000562174 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
EDC3-204ENST00000562174 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
EDC3-204ENST00000562174 TERF2IPQ9NYB0 399 aa16.72■□□□□ 0.27
EDC3-204ENST00000562174 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
EDC3-204ENST00000562174 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
EDC3-204ENST00000562174 CRB1P82279 1406 aa16.71■□□□□ 0.27
EDC3-204ENST00000562174 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
EDC3-204ENST00000562174 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
EDC3-204ENST00000562174 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
EDC3-204ENST00000562174 USP47Q96K76 1375 aa16.71■□□□□ 0.27
EDC3-204ENST00000562174 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
EDC3-204ENST00000562174 NFAT5O94916 1531 aa16.7■□□□□ 0.26
EDC3-204ENST00000562174 ST20-MTHFSA0A0A6YYL1 179 aa16.7■□□□□ 0.26
EDC3-204ENST00000562174 SOX12O15370 315 aa16.7■□□□□ 0.26
EDC3-204ENST00000562174 BAG6P46379 1132 aa16.7■□□□□ 0.26
EDC3-204ENST00000562174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
EDC3-204ENST00000562174 ABCC6O95255 1503 aa16.7■□□□□ 0.26
EDC3-204ENST00000562174 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
EDC3-204ENST00000562174 DEFB132Q7Z7B7 95 aa16.69■□□□□ 0.26
EDC3-204ENST00000562174 TESK2Q96S53 571 aa16.69■□□□□ 0.26
EDC3-204ENST00000562174 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
EDC3-204ENST00000562174 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
EDC3-204ENST00000562174 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms