RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
UBR1-203ENST00000562173 RUSC2Q8N2Y8 1516 aa9.97□□□□□ -0.81
UBR1-203ENST00000562173 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
UBR1-203ENST00000562173 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
UBR1-203ENST00000562173 HLA-CQ95604 372 aa9.97□□□□□ -0.81
UBR1-203ENST00000562173 IRX2Q9BZI1 471 aaPredicted RBP9.97□□□□□ -0.81
UBR1-203ENST00000562173 ABCC10Q5T3U5 1492 aa9.97□□□□□ -0.81
UBR1-203ENST00000562173 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
UBR1-203ENST00000562173 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
UBR1-203ENST00000562173 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
UBR1-203ENST00000562173 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
UBR1-203ENST00000562173 TTBK1Q5TCY1 1321 aaPredicted RBP9.95□□□□□ -0.82
UBR1-203ENST00000562173 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
UBR1-203ENST00000562173 BIVM-ERCC5R4GMW8 1640 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 HRCP23327 699 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 MSS51Q4VC12 460 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 BRICD5Q6PL45 260 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
UBR1-203ENST00000562173 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
UBR1-203ENST00000562173 ADH1BP00325 375 aa9.93□□□□□ -0.82
UBR1-203ENST00000562173 QPCTQ16769 361 aa9.93□□□□□ -0.82
UBR1-203ENST00000562173 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
UBR1-203ENST00000562173 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
UBR1-203ENST00000562173 ADGRL1O94910 1474 aa9.92□□□□□ -0.82
UBR1-203ENST00000562173 COL17A1Q9UMD9 1497 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 SOCS7O14512 581 aa9.92□□□□□ -0.82
UBR1-203ENST00000562173 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
UBR1-203ENST00000562173 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 HELBQ8NG08 1087 aaPredicted RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
UBR1-203ENST00000562173 CUL7Q14999 1698 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 GGCXP38435 758 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 RFC5P40937 340 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 TMEM259Q4ZIN3 620 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 MAPKBP1O60336 1514 aa9.91□□□□□ -0.82
UBR1-203ENST00000562173 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.82
UBR1-203ENST00000562173 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
UBR1-203ENST00000562173 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
UBR1-203ENST00000562173 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
UBR1-203ENST00000562173 SPSB2Q99619 263 aa9.9□□□□□ -0.82
UBR1-203ENST00000562173 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
UBR1-203ENST00000562173 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
UBR1-203ENST00000562173 S1PR4O95977 384 aa9.89□□□□□ -0.83
UBR1-203ENST00000562173 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
UBR1-203ENST00000562173 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
UBR1-203ENST00000562173 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
UBR1-203ENST00000562173 PRR7Q8TB68 274 aa9.87□□□□□ -0.83
UBR1-203ENST00000562173 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
UBR1-203ENST00000562173 APBB1O00213 710 aa9.86□□□□□ -0.83
UBR1-203ENST00000562173 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
UBR1-203ENST00000562173 FLIIQ13045 1269 aa9.86□□□□□ -0.83
UBR1-203ENST00000562173 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
UBR1-203ENST00000562173 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
UBR1-203ENST00000562173 JUNDP17535 347 aa9.85□□□□□ -0.83
UBR1-203ENST00000562173 MMP16P51512 607 aa9.85□□□□□ -0.83
UBR1-203ENST00000562173 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
UBR1-203ENST00000562173 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
UBR1-203ENST00000562173 ERICH3Q5RHP9 1530 aa9.85□□□□□ -0.83
UBR1-203ENST00000562173 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
UBR1-203ENST00000562173 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
UBR1-203ENST00000562173 USP17L8P0C7I0 530 aa9.83□□□□□ -0.84
UBR1-203ENST00000562173 PTPRNQ16849 979 aa9.83□□□□□ -0.84
UBR1-203ENST00000562173 ERICH6Q7L0X2 663 aa9.83□□□□□ -0.84
UBR1-203ENST00000562173 FAM160A2Q8N612 972 aaPredicted RBP9.83□□□□□ -0.84
UBR1-203ENST00000562173 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
UBR1-203ENST00000562173 SUPT5HO00267 1087 aaKnown RBP9.82□□□□□ -0.84
UBR1-203ENST00000562173 MCM6Q14566 821 aa9.82□□□□□ -0.84
UBR1-203ENST00000562173 AP1G2O75843 785 aa9.81□□□□□ -0.84
UBR1-203ENST00000562173 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
UBR1-203ENST00000562173 KIF21BO75037 1637 aa9.81□□□□□ -0.84
UBR1-203ENST00000562173 GFRA3O60609 400 aa9.8□□□□□ -0.84
UBR1-203ENST00000562173 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
UBR1-203ENST00000562173 SLC19A1P41440 591 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 LIAT1Q6ZQX7 453 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 TSC1Q92574 1164 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 PRDM9Q9NQV7 894 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 ASXL2Q76L83 1435 aa9.79□□□□□ -0.84
UBR1-203ENST00000562173 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
UBR1-203ENST00000562173 LCE2BO14633 110 aa9.78□□□□□ -0.84
UBR1-203ENST00000562173 CCNYL3P0C7X3 344 aa9.78□□□□□ -0.84
UBR1-203ENST00000562173 Q6ZNB5 142 aa9.78□□□□□ -0.84
UBR1-203ENST00000562173 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
UBR1-203ENST00000562173 TRIM67Q6ZTA4 783 aa9.77□□□□□ -0.85
UBR1-203ENST00000562173 ZCCHC11Q5TAX3 1644 aaKnown RBP9.77□□□□□ -0.85
UBR1-203ENST00000562173 NRG2O14511 850 aaPredicted RBP9.76□□□□□ -0.85
UBR1-203ENST00000562173 CTDSPL2Q05D32 466 aa9.76□□□□□ -0.85
UBR1-203ENST00000562173 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
UBR1-203ENST00000562173 F12P00748 615 aaPredicted RBP9.75□□□□□ -0.85
UBR1-203ENST00000562173 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
UBR1-203ENST00000562173 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
UBR1-203ENST00000562173 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
UBR1-203ENST00000562173 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
UBR1-203ENST00000562173 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
UBR1-203ENST00000562173 GLI2P10070 1586 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms