RNA–Protein interactions for RNA: ENST00000561790.1

RAB43P1-201, Transcript of RAB43 pseudogene 1, humanhuman

BASIC

Gene RAB43P1, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43P1-201ENST00000561790 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
RAB43P1-201ENST00000561790 FAM98CQ17RN3 349 aaKnown RBP22.39■■□□□ 1.17
RAB43P1-201ENST00000561790 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
RAB43P1-201ENST00000561790 COL14A1Q05707 1796 aaKnown RBP22.35■■□□□ 1.17
RAB43P1-201ENST00000561790 HRCP23327 699 aa22.35■■□□□ 1.17
RAB43P1-201ENST00000561790 NUDT16Q96DE0 195 aaKnown RBP22.34■■□□□ 1.17
RAB43P1-201ENST00000561790 PRDM11Q9NQV5 511 aa22.34■■□□□ 1.17
RAB43P1-201ENST00000561790 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
RAB43P1-201ENST00000561790 BAG6P46379 1132 aa22.33■■□□□ 1.17
RAB43P1-201ENST00000561790 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
RAB43P1-201ENST00000561790 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
RAB43P1-201ENST00000561790 CDK19Q9BWU1 502 aa22.3■■□□□ 1.16
RAB43P1-201ENST00000561790 ITSN1Q15811 1721 aa22.3■■□□□ 1.16
RAB43P1-201ENST00000561790 ARHGEF28Q8N1W1 1705 aaKnown RBP22.29■■□□□ 1.16
RAB43P1-201ENST00000561790 ATP7BP35670 1465 aa22.28■■□□□ 1.16
RAB43P1-201ENST00000561790 KIAA0232Q92628 1395 aa22.26■■□□□ 1.15
RAB43P1-201ENST00000561790 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
RAB43P1-201ENST00000561790 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
RAB43P1-201ENST00000561790 ZC3H6P61129 1189 aaKnown RBP22.25■■□□□ 1.15
RAB43P1-201ENST00000561790 CHRNA2Q15822 529 aa22.25■■□□□ 1.15
RAB43P1-201ENST00000561790 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
RAB43P1-201ENST00000561790 CCDC61Q9Y6R9 512 aa22.25■■□□□ 1.15
RAB43P1-201ENST00000561790 CRYBG1Q9Y4K1 1723 aa22.25■■□□□ 1.15
RAB43P1-201ENST00000561790 ACEP12821 1306 aa22.24■■□□□ 1.15
RAB43P1-201ENST00000561790 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
RAB43P1-201ENST00000561790 NBPF8Q3BBV2 869 aa22.23■■□□□ 1.15
RAB43P1-201ENST00000561790 EVA1CP58658 441 aa22.22■■□□□ 1.15
RAB43P1-201ENST00000561790 EN1Q05925 392 aaPredicted RBP22.22■■□□□ 1.15
RAB43P1-201ENST00000561790 SPATA31A1Q5TZJ5 1347 aa22.22■■□□□ 1.15
RAB43P1-201ENST00000561790 POLR3AO14802 1390 aaPredicted RBP22.21■■□□□ 1.15
RAB43P1-201ENST00000561790 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
RAB43P1-201ENST00000561790 PLEKHG3A1L390 1219 aa22.2■■□□□ 1.14
RAB43P1-201ENST00000561790 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
RAB43P1-201ENST00000561790 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.14
RAB43P1-201ENST00000561790 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
RAB43P1-201ENST00000561790 PHRF1Q9P1Y6 1649 aaKnown RBP22.19■■□□□ 1.14
RAB43P1-201ENST00000561790 KIAA1210Q9ULL0 1709 aa22.19■■□□□ 1.14
RAB43P1-201ENST00000561790 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
RAB43P1-201ENST00000561790 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
RAB43P1-201ENST00000561790 FAM196AQ6ZSG2 479 aa22.17■■□□□ 1.14
RAB43P1-201ENST00000561790 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
RAB43P1-201ENST00000561790 LRP5O75197 1615 aa22.16■■□□□ 1.14
RAB43P1-201ENST00000561790 TRIM37O94972 964 aa22.15■■□□□ 1.14
RAB43P1-201ENST00000561790 CENPJQ9HC77 1338 aaPredicted RBP22.14■■□□□ 1.14
RAB43P1-201ENST00000561790 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
RAB43P1-201ENST00000561790 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
RAB43P1-201ENST00000561790 DISP2A7MBM2 1401 aa22.14■■□□□ 1.13
RAB43P1-201ENST00000561790 SSH2Q76I76 1423 aa22.14■■□□□ 1.13
RAB43P1-201ENST00000561790 R3HDM1Q15032 1099 aaKnown RBP22.13■■□□□ 1.13
RAB43P1-201ENST00000561790 BARGINQ6ZT62 677 aa22.13■■□□□ 1.13
RAB43P1-201ENST00000561790 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
RAB43P1-201ENST00000561790 EZH2Q15910 746 aaKnown RBP22.12■■□□□ 1.13
RAB43P1-201ENST00000561790 CABP2Q9NPB3 220 aa22.12■■□□□ 1.13
RAB43P1-201ENST00000561790 CPDO75976 1380 aa22.12■■□□□ 1.13
RAB43P1-201ENST00000561790 USP19O94966 1318 aa22.11■■□□□ 1.13
RAB43P1-201ENST00000561790 APBA3O96018 575 aa22.11■■□□□ 1.13
RAB43P1-201ENST00000561790 LARP1Q6PKG0 1096 aaKnown RBP22.11■■□□□ 1.13
RAB43P1-201ENST00000561790 TCP11L2Q8N4U5 519 aa22.11■■□□□ 1.13
RAB43P1-201ENST00000561790 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
RAB43P1-201ENST00000561790 TNS1Q9HBL0 1735 aaKnown RBP22.1■■□□□ 1.13
RAB43P1-201ENST00000561790 GCP02774 474 aa22.09■■□□□ 1.13
RAB43P1-201ENST00000561790 CAMKK2Q96RR4 588 aa22.09■■□□□ 1.13
RAB43P1-201ENST00000561790 CAMTA1Q9Y6Y1 1673 aa22.09■■□□□ 1.13
RAB43P1-201ENST00000561790 ZBTB7CA1YPR0 619 aa22.08■■□□□ 1.13
RAB43P1-201ENST00000561790 BRD4O60885 1362 aaPredicted RBP22.07■■□□□ 1.12
RAB43P1-201ENST00000561790 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
RAB43P1-201ENST00000561790 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
RAB43P1-201ENST00000561790 PARD3Q8TEW0 1356 aa22.06■■□□□ 1.12
RAB43P1-201ENST00000561790 NLRP6P59044 892 aa22.05■■□□□ 1.12
RAB43P1-201ENST00000561790 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
RAB43P1-201ENST00000561790 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
RAB43P1-201ENST00000561790 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.12
RAB43P1-201ENST00000561790 EVC2Q86UK5 1308 aa22.02■■□□□ 1.12
RAB43P1-201ENST00000561790 COL5A2P05997 1499 aaPredicted RBP22.02■■□□□ 1.12
RAB43P1-201ENST00000561790 USP6P35125 1406 aa22.01■■□□□ 1.11
RAB43P1-201ENST00000561790 NBPF14Q5TI25 921 aa22■■□□□ 1.11
RAB43P1-201ENST00000561790 CRB1P82279 1406 aa21.99■■□□□ 1.11
RAB43P1-201ENST00000561790 C11orf95C9JLR9 678 aaPredicted RBP21.99■■□□□ 1.11
RAB43P1-201ENST00000561790 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
RAB43P1-201ENST00000561790 TOM1L2Q6ZVM7 507 aa21.97■■□□□ 1.11
RAB43P1-201ENST00000561790 PARP4Q9UKK3 1724 aaKnown RBP21.95■■□□□ 1.1
RAB43P1-201ENST00000561790 DDB1Q16531 1140 aa21.95■■□□□ 1.1
RAB43P1-201ENST00000561790 SLIT3O75094 1523 aa21.95■■□□□ 1.1
RAB43P1-201ENST00000561790 NEUROD1Q13562 356 aa21.94■■□□□ 1.1
RAB43P1-201ENST00000561790 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
RAB43P1-201ENST00000561790 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
RAB43P1-201ENST00000561790 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
RAB43P1-201ENST00000561790 OVOS2A0A0G2JMS6 1433 aa21.93■■□□□ 1.1
RAB43P1-201ENST00000561790 OVOS2A0A0J9YW53 1432 aa21.93■■□□□ 1.1
RAB43P1-201ENST00000561790 OVOS2Q6IE36 1432 aa21.93■■□□□ 1.1
RAB43P1-201ENST00000561790 RREB1Q92766 1687 aa21.93■■□□□ 1.1
RAB43P1-201ENST00000561790 KCNH5Q8NCM2 988 aa21.92■■□□□ 1.1
RAB43P1-201ENST00000561790 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
RAB43P1-201ENST00000561790 TTC21BQ7Z4L5 1316 aa21.91■■□□□ 1.1
RAB43P1-201ENST00000561790 SOX12O15370 315 aa21.91■■□□□ 1.1
RAB43P1-201ENST00000561790 PIK3C2AO00443 1686 aa21.91■■□□□ 1.1
RAB43P1-201ENST00000561790 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
RAB43P1-201ENST00000561790 WDR17Q8IZU2 1322 aa21.9■■□□□ 1.1
RAB43P1-201ENST00000561790 CSB-PGBD3P0DP91 1061 aa21.9■■□□□ 1.1
RAB43P1-201ENST00000561790 AXIN2Q9Y2T1 843 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms