RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
CDH1-203ENST00000561751 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
CDH1-203ENST00000561751 FBXO41Q8TF61 875 aa9.27□□□□□ -0.93
CDH1-203ENST00000561751 PLEKHH2Q8IVE3 1493 aa9.27□□□□□ -0.93
CDH1-203ENST00000561751 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 FMN1Q68DA7 1419 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 PPP1R3GB7ZBB8 358 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 C8orf34Q49A92 452 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
CDH1-203ENST00000561751 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
CDH1-203ENST00000561751 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
CDH1-203ENST00000561751 DYNC1I1O14576 645 aa9.25□□□□□ -0.93
CDH1-203ENST00000561751 DMTNQ08495 405 aa9.25□□□□□ -0.93
CDH1-203ENST00000561751 CNGB1Q14028 1251 aaPredicted RBP9.25□□□□□ -0.93
CDH1-203ENST00000561751 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
CDH1-203ENST00000561751 ANTXR1Q9H6X2 564 aa9.25□□□□□ -0.93
CDH1-203ENST00000561751 POGKQ9P215 609 aa9.25□□□□□ -0.93
CDH1-203ENST00000561751 A0A0U1RQG5 324 aaPredicted RBP9.24□□□□□ -0.93
CDH1-203ENST00000561751 CANXP27824 592 aaKnown RBP9.24□□□□□ -0.93
CDH1-203ENST00000561751 RALBP1Q15311 655 aa9.24□□□□□ -0.93
CDH1-203ENST00000561751 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
CDH1-203ENST00000561751 MRPL50Q8N5N7 158 aaKnown RBP9.24□□□□□ -0.93
CDH1-203ENST00000561751 TRIM44Q96DX7 344 aaPredicted RBP9.24□□□□□ -0.93
CDH1-203ENST00000561751 PPP1R9BQ96SB3 815 aa9.24□□□□□ -0.93
CDH1-203ENST00000561751 WDR7Q9Y4E6 1490 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 LETM1O95202 739 aaPredicted RBP9.23□□□□□ -0.93
CDH1-203ENST00000561751 MCM5P33992 734 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
CDH1-203ENST00000561751 SPRYD3Q8NCJ5 442 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 WNT2BQ93097 391 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
CDH1-203ENST00000561751 MCM4P33991 863 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 RGS3P49796 1198 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 CCDC173Q0VFZ6 552 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 CSPP1Q1MSJ5 1256 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 GRPEL1Q9HAV7 217 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
CDH1-203ENST00000561751 EIF3AQ14152 1382 aaKnown RBP9.22□□□□□ -0.93
CDH1-203ENST00000561751 MAGI3Q5TCQ9 1506 aa9.21□□□□□ -0.93
CDH1-203ENST00000561751 HECW1Q76N89 1606 aa9.21□□□□□ -0.93
CDH1-203ENST00000561751 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 DDX12PQ92771 950 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 ARXQ96QS3 562 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.94
CDH1-203ENST00000561751 NAIPQ13075 1403 aa9.21□□□□□ -0.94
CDH1-203ENST00000561751 KIAA0556O60303 1618 aa9.2□□□□□ -0.94
CDH1-203ENST00000561751 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
CDH1-203ENST00000561751 ZNF500O60304 480 aaPredicted RBP9.2□□□□□ -0.94
CDH1-203ENST00000561751 EPAS1Q99814 870 aa9.2□□□□□ -0.94
CDH1-203ENST00000561751 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.19□□□□□ -0.94
CDH1-203ENST00000561751 TMC1Q8TDI8 760 aa9.19□□□□□ -0.94
CDH1-203ENST00000561751 ANP32BQ92688 251 aaKnown RBP9.19□□□□□ -0.94
CDH1-203ENST00000561751 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
CDH1-203ENST00000561751 CHMP5Q9NZZ3 219 aa9.19□□□□□ -0.94
CDH1-203ENST00000561751 NAP1L2Q9ULW6 460 aaPredicted RBP9.19□□□□□ -0.94
CDH1-203ENST00000561751 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
CDH1-203ENST00000561751 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
CDH1-203ENST00000561751 RIPK4P57078 832 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 CTTNBP2Q8WZ74 1663 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 FYCO1Q9BQS8 1478 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 CCDC94Q9BW85 323 aaPredicted RBP9.18□□□□□ -0.94
CDH1-203ENST00000561751 KIAA1468Q9P260 1216 aa9.18□□□□□ -0.94
CDH1-203ENST00000561751 PTPRMP28827 1452 aa9.17□□□□□ -0.94
CDH1-203ENST00000561751 CD109Q6YHK3 1445 aa9.17□□□□□ -0.94
CDH1-203ENST00000561751 MYBBP1AQ9BQG0 1328 aaKnown RBP9.17□□□□□ -0.94
CDH1-203ENST00000561751 TRAK2O60296 914 aa9.17□□□□□ -0.94
CDH1-203ENST00000561751 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
CDH1-203ENST00000561751 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
CDH1-203ENST00000561751 PDIA6Q15084 440 aa9.17□□□□□ -0.94
CDH1-203ENST00000561751 VIRMAQ69YN4 1812 aaKnown RBP9.17□□□□□ -0.94
CDH1-203ENST00000561751 USP19O94966 1318 aa9.16□□□□□ -0.94
CDH1-203ENST00000561751 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
CDH1-203ENST00000561751 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
CDH1-203ENST00000561751 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
CDH1-203ENST00000561751 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
CDH1-203ENST00000561751 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
CDH1-203ENST00000561751 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
CDH1-203ENST00000561751 ARAP3Q8WWN8 1544 aa9.15□□□□□ -0.94
CDH1-203ENST00000561751 RPRD2Q5VT52 1461 aaKnown RBP9.15□□□□□ -0.94
CDH1-203ENST00000561751 CASKIN1Q8WXD9 1431 aa9.15□□□□□ -0.94
CDH1-203ENST00000561751 FAM193AP78312 1265 aa9.15□□□□□ -0.94
CDH1-203ENST00000561751 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
CDH1-203ENST00000561751 UPF2Q9HAU5 1272 aaKnown RBP9.15□□□□□ -0.94
CDH1-203ENST00000561751 FHOD3Q2V2M9 1422 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 ONECUT3O60422 494 aaPredicted RBP9.14□□□□□ -0.95
CDH1-203ENST00000561751 ZSCAN20P17040 1043 aaPredicted RBP9.14□□□□□ -0.95
CDH1-203ENST00000561751 MSNP26038 577 aaKnown RBP9.14□□□□□ -0.95
CDH1-203ENST00000561751 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms