RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
USB1-205ENST00000561743 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
USB1-205ENST00000561743 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
USB1-205ENST00000561743 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
USB1-205ENST00000561743 EP400Q96L91 3159 aa19.43■□□□□ 0.7
USB1-205ENST00000561743 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
USB1-205ENST00000561743 CCDC61Q9Y6R9 512 aa19.43■□□□□ 0.7
USB1-205ENST00000561743 ATAD2Q6PL18 1390 aa19.43■□□□□ 0.7
USB1-205ENST00000561743 FAM83GA6ND36 823 aa19.42■□□□□ 0.7
USB1-205ENST00000561743 ACEP12821 1306 aa19.42■□□□□ 0.7
USB1-205ENST00000561743 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
USB1-205ENST00000561743 ROCK2O75116 1388 aaKnown RBP19.41■□□□□ 0.7
USB1-205ENST00000561743 PPIP5K1Q6PFW1 1433 aa19.41■□□□□ 0.7
USB1-205ENST00000561743 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
USB1-205ENST00000561743 VPS72Q15906 364 aa19.39■□□□□ 0.69
USB1-205ENST00000561743 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
USB1-205ENST00000561743 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
USB1-205ENST00000561743 NRKQ7Z2Y5 1582 aa19.37■□□□□ 0.69
USB1-205ENST00000561743 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
USB1-205ENST00000561743 BTG4Q9NY30 223 aa19.35■□□□□ 0.69
USB1-205ENST00000561743 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
USB1-205ENST00000561743 NUTM2GQ5VZR2 741 aa19.34■□□□□ 0.69
USB1-205ENST00000561743 CCDC9Q9Y3X0 531 aaKnown RBP19.34■□□□□ 0.69
USB1-205ENST00000561743 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
USB1-205ENST00000561743 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
USB1-205ENST00000561743 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
USB1-205ENST00000561743 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
USB1-205ENST00000561743 PRDM11Q9NQV5 511 aa19.32■□□□□ 0.68
USB1-205ENST00000561743 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
USB1-205ENST00000561743 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
USB1-205ENST00000561743 LMO7Q8WWI1 1683 aa19.31■□□□□ 0.68
USB1-205ENST00000561743 USP6P35125 1406 aa19.31■□□□□ 0.68
USB1-205ENST00000561743 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
USB1-205ENST00000561743 ABTB2Q8N961 1025 aa19.3■□□□□ 0.68
USB1-205ENST00000561743 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
USB1-205ENST00000561743 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
USB1-205ENST00000561743 USP19O94966 1318 aa19.29■□□□□ 0.68
USB1-205ENST00000561743 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
USB1-205ENST00000561743 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
USB1-205ENST00000561743 CHRNA2Q15822 529 aa19.28■□□□□ 0.68
USB1-205ENST00000561743 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
USB1-205ENST00000561743 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
USB1-205ENST00000561743 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
USB1-205ENST00000561743 MON2Q7Z3U7 1717 aa19.27■□□□□ 0.68
USB1-205ENST00000561743 FAM98CQ17RN3 349 aaKnown RBP19.26■□□□□ 0.67
USB1-205ENST00000561743 CCDC125Q86Z20 511 aa19.26■□□□□ 0.67
USB1-205ENST00000561743 CARD11Q9BXL7 1154 aa19.26■□□□□ 0.67
USB1-205ENST00000561743 CPDO75976 1380 aa19.26■□□□□ 0.67
USB1-205ENST00000561743 CAMTA1Q9Y6Y1 1673 aa19.26■□□□□ 0.67
USB1-205ENST00000561743 SLIT3O75094 1523 aa19.25■□□□□ 0.67
USB1-205ENST00000561743 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
USB1-205ENST00000561743 KRT27Q7Z3Y8 459 aa19.24■□□□□ 0.67
USB1-205ENST00000561743 NLRP13Q86W25 1043 aa19.24■□□□□ 0.67
USB1-205ENST00000561743 A0A0G2JS52 829 aa19.23■□□□□ 0.67
USB1-205ENST00000561743 MYT1Q01538 1121 aa19.23■□□□□ 0.67
USB1-205ENST00000561743 GCP02774 474 aa19.22■□□□□ 0.67
USB1-205ENST00000561743 CPSF1Q10570 1443 aaKnown RBP19.22■□□□□ 0.67
USB1-205ENST00000561743 SPATA31A1Q5TZJ5 1347 aa19.22■□□□□ 0.67
USB1-205ENST00000561743 STRN4Q9NRL3 753 aa19.21■□□□□ 0.67
USB1-205ENST00000561743 COL18A1P39060 1754 aa19.21■□□□□ 0.67
USB1-205ENST00000561743 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
USB1-205ENST00000561743 NLRP6P59044 892 aa19.19■□□□□ 0.66
USB1-205ENST00000561743 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
USB1-205ENST00000561743 COL5A2P05997 1499 aaPredicted RBP19.19■□□□□ 0.66
USB1-205ENST00000561743 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
USB1-205ENST00000561743 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
USB1-205ENST00000561743 CD163L1Q9NR16 1453 aa19.18■□□□□ 0.66
USB1-205ENST00000561743 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
USB1-205ENST00000561743 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
USB1-205ENST00000561743 KTN1Q86UP2 1357 aaKnown RBP19.17■□□□□ 0.66
USB1-205ENST00000561743 EVA1CP58658 441 aa19.16■□□□□ 0.66
USB1-205ENST00000561743 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
USB1-205ENST00000561743 PARP4Q9UKK3 1724 aaKnown RBP19.15■□□□□ 0.66
USB1-205ENST00000561743 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
USB1-205ENST00000561743 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
USB1-205ENST00000561743 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
USB1-205ENST00000561743 NFAT5O94916 1531 aa19.15■□□□□ 0.66
USB1-205ENST00000561743 FAM182BQ5T319 152 aa19.14■□□□□ 0.65
USB1-205ENST00000561743 DEFB132Q7Z7B7 95 aa19.14■□□□□ 0.65
USB1-205ENST00000561743 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
USB1-205ENST00000561743 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
USB1-205ENST00000561743 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
USB1-205ENST00000561743 LTN1O94822 1766 aa19.11■□□□□ 0.65
USB1-205ENST00000561743 CRB1P82279 1406 aa19.11■□□□□ 0.65
USB1-205ENST00000561743 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
USB1-205ENST00000561743 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
USB1-205ENST00000561743 TESK2Q96S53 571 aa19.11■□□□□ 0.65
USB1-205ENST00000561743 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
USB1-205ENST00000561743 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
USB1-205ENST00000561743 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
USB1-205ENST00000561743 KCNH5Q8NCM2 988 aa19.09■□□□□ 0.65
USB1-205ENST00000561743 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
USB1-205ENST00000561743 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
USB1-205ENST00000561743 SLC12A5Q9H2X9 1139 aa19.09■□□□□ 0.65
USB1-205ENST00000561743 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
USB1-205ENST00000561743 ABCC6O95255 1503 aa19.09■□□□□ 0.65
USB1-205ENST00000561743 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
USB1-205ENST00000561743 USP31Q70CQ4 1352 aa19.08■□□□□ 0.65
USB1-205ENST00000561743 ARHGEF25Q86VW2 580 aa19.08■□□□□ 0.64
USB1-205ENST00000561743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 699.2 ms