RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
AC010542.3-202ENST00000561728 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
AC010542.3-202ENST00000561728 SGIP1Q9BQI5 828 aa15.17■□□□□ 0.02
AC010542.3-202ENST00000561728 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
AC010542.3-202ENST00000561728 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
AC010542.3-202ENST00000561728 NUTM2FA1L443 756 aa15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 CDC42BPGQ6DT37 1551 aa15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 ABCA3Q99758 1704 aa15.14■□□□□ 0.01
AC010542.3-202ENST00000561728 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
AC010542.3-202ENST00000561728 PSME1Q06323 249 aa15.13■□□□□ 0.01
AC010542.3-202ENST00000561728 JMYQ8N9B5 988 aa15.13■□□□□ 0.01
AC010542.3-202ENST00000561728 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
AC010542.3-202ENST00000561728 RGPD3A6NKT7 1758 aaPredicted RBP15.12■□□□□ 0.01
AC010542.3-202ENST00000561728 RGPD4Q7Z3J3 1758 aa15.12■□□□□ 0.01
AC010542.3-202ENST00000561728 SPATA31A1Q5TZJ5 1347 aa15.12■□□□□ 0.01
AC010542.3-202ENST00000561728 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
AC010542.3-202ENST00000561728 COL14A1Q05707 1796 aaKnown RBP15.11■□□□□ 0.01
AC010542.3-202ENST00000561728 PLSCR1O15162 318 aa15.11■□□□□ 0.01
AC010542.3-202ENST00000561728 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
AC010542.3-202ENST00000561728 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
AC010542.3-202ENST00000561728 PCNTO95613 3336 aa15.09■□□□□ 0.01
AC010542.3-202ENST00000561728 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
AC010542.3-202ENST00000561728 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
AC010542.3-202ENST00000561728 KIF3CO14782 793 aa15.07■□□□□ 0
AC010542.3-202ENST00000561728 SLC15A2Q16348 729 aa15.07■□□□□ 0
AC010542.3-202ENST00000561728 ADCY9O60503 1353 aa15.06■□□□□ 0
AC010542.3-202ENST00000561728 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
AC010542.3-202ENST00000561728 FAM161AQ3B820 660 aa15.05■□□□□ -0
AC010542.3-202ENST00000561728 USP35Q9P2H5 1018 aa15.05■□□□□ -0
AC010542.3-202ENST00000561728 SBNO1A3KN83 1393 aa15.05■□□□□ -0
AC010542.3-202ENST00000561728 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
AC010542.3-202ENST00000561728 WDR90Q96KV7 1748 aa15.05■□□□□ -0
AC010542.3-202ENST00000561728 NAIPQ13075 1403 aa15.03■□□□□ -0
AC010542.3-202ENST00000561728 TNS2Q63HR2 1409 aa15.03■□□□□ -0
AC010542.3-202ENST00000561728 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
AC010542.3-202ENST00000561728 STRN4Q9NRL3 753 aa15.03■□□□□ -0
AC010542.3-202ENST00000561728 TECPR2O15040 1411 aa15.02■□□□□ -0
AC010542.3-202ENST00000561728 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
AC010542.3-202ENST00000561728 BARGINQ6ZT62 677 aa15.02■□□□□ -0
AC010542.3-202ENST00000561728 PRDM11Q9NQV5 511 aa15.02■□□□□ -0
AC010542.3-202ENST00000561728 TOMM70O94826 608 aa15.01□□□□□ -0.01
AC010542.3-202ENST00000561728 POLD1P28340 1107 aa15.01□□□□□ -0.01
AC010542.3-202ENST00000561728 HTRA3P83110 453 aa15.01□□□□□ -0.01
AC010542.3-202ENST00000561728 PROM2Q8N271 834 aa15.01□□□□□ -0.01
AC010542.3-202ENST00000561728 NLGN2Q8NFZ4 835 aa15.01□□□□□ -0.01
AC010542.3-202ENST00000561728 HSPA1AP0DMV8 641 aaKnown RBP15□□□□□ -0.01
AC010542.3-202ENST00000561728 HSPA1BP0DMV9 641 aaKnown RBP15□□□□□ -0.01
AC010542.3-202ENST00000561728 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
AC010542.3-202ENST00000561728 OVOS2A0A0G2JMS6 1433 aa14.99□□□□□ -0.01
AC010542.3-202ENST00000561728 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
AC010542.3-202ENST00000561728 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
AC010542.3-202ENST00000561728 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
AC010542.3-202ENST00000561728 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
AC010542.3-202ENST00000561728 TXNRD1Q16881 649 aa14.97□□□□□ -0.01
AC010542.3-202ENST00000561728 DAPK1P53355 1430 aa14.97□□□□□ -0.01
AC010542.3-202ENST00000561728 E9PCH4 1651 aa14.97□□□□□ -0.01
AC010542.3-202ENST00000561728 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
AC010542.3-202ENST00000561728 FMN2Q9NZ56 1722 aa14.93□□□□□ -0.02
AC010542.3-202ENST00000561728 EVA1CP58658 441 aa14.93□□□□□ -0.02
AC010542.3-202ENST00000561728 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
AC010542.3-202ENST00000561728 NRXN1Q9ULB1 1477 aa14.91□□□□□ -0.02
AC010542.3-202ENST00000561728 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
AC010542.3-202ENST00000561728 PMFBP1Q8TBY8 1022 aa14.91□□□□□ -0.02
AC010542.3-202ENST00000561728 SBF2Q86WG5 1849 aa14.91□□□□□ -0.02
AC010542.3-202ENST00000561728 MLLT1Q03111 559 aaPredicted RBP14.9□□□□□ -0.02
AC010542.3-202ENST00000561728 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
AC010542.3-202ENST00000561728 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
AC010542.3-202ENST00000561728 TOPAZ1Q8N9V7 1692 aa14.89□□□□□ -0.03
AC010542.3-202ENST00000561728 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
AC010542.3-202ENST00000561728 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
AC010542.3-202ENST00000561728 KIAA0232Q92628 1395 aa14.88□□□□□ -0.03
AC010542.3-202ENST00000561728 WAPLQ7Z5K2 1190 aa14.88□□□□□ -0.03
AC010542.3-202ENST00000561728 SLC16A10Q8TF71 515 aa14.88□□□□□ -0.03
AC010542.3-202ENST00000561728 THRAP3Q9Y2W1 955 aaKnown RBP14.88□□□□□ -0.03
AC010542.3-202ENST00000561728 PARP4Q9UKK3 1724 aaKnown RBP14.87□□□□□ -0.03
AC010542.3-202ENST00000561728 RBM46Q8TBY0 533 aaKnown RBP14.87□□□□□ -0.03
AC010542.3-202ENST00000561728 VGFO15240 615 aaPredicted RBP14.86□□□□□ -0.03
AC010542.3-202ENST00000561728 TULP4Q9NRJ4 1543 aa14.86□□□□□ -0.03
AC010542.3-202ENST00000561728 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
AC010542.3-202ENST00000561728 ATP7BP35670 1465 aa14.85□□□□□ -0.03
AC010542.3-202ENST00000561728 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
AC010542.3-202ENST00000561728 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
AC010542.3-202ENST00000561728 USP19O94966 1318 aa14.85□□□□□ -0.03
AC010542.3-202ENST00000561728 RGPD8O14715 1765 aaPredicted RBP14.84□□□□□ -0.03
AC010542.3-202ENST00000561728 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
AC010542.3-202ENST00000561728 FSTL1Q12841 308 aa14.83□□□□□ -0.04
AC010542.3-202ENST00000561728 STK26Q9P289 416 aa14.83□□□□□ -0.04
AC010542.3-202ENST00000561728 ALS2Q96Q42 1657 aa14.82□□□□□ -0.04
AC010542.3-202ENST00000561728 DDB1Q16531 1140 aa14.82□□□□□ -0.04
AC010542.3-202ENST00000561728 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
AC010542.3-202ENST00000561728 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 ZC3H6P61129 1189 aaKnown RBP14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 CLTCL1P53675 1640 aa14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 CRYBG1Q9Y4K1 1723 aa14.8□□□□□ -0.04
AC010542.3-202ENST00000561728 NMRK2Q9NPI5 230 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms