RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 SBNO2Q9Y2G9 1366 aa26.42■■□□□ 1.82
PKD1-223ENST00000561668 MARF1Q9Y4F3 1742 aaKnown RBP26.4■■□□□ 1.82
PKD1-223ENST00000561668 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.81
PKD1-223ENST00000561668 UNC5CLQ8IV45 518 aa26.37■■□□□ 1.81
PKD1-223ENST00000561668 ABTB2Q8N961 1025 aa26.37■■□□□ 1.81
PKD1-223ENST00000561668 TOPAZ1Q8N9V7 1692 aa26.37■■□□□ 1.81
PKD1-223ENST00000561668 SLC24A1O60721 1099 aa26.35■■□□□ 1.81
PKD1-223ENST00000561668 ALS2Q96Q42 1657 aa26.34■■□□□ 1.81
PKD1-223ENST00000561668 NUTM2GQ5VZR2 741 aa26.34■■□□□ 1.81
PKD1-223ENST00000561668 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
PKD1-223ENST00000561668 BCL9LQ86UU0 1499 aa26.34■■□□□ 1.81
PKD1-223ENST00000561668 CDK12Q9NYV4 1490 aaPredicted RBP26.34■■□□□ 1.81
PKD1-223ENST00000561668 FAM83GA6ND36 823 aa26.33■■□□□ 1.81
PKD1-223ENST00000561668 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.8
PKD1-223ENST00000561668 ATAD2Q6PL18 1390 aa26.32■■□□□ 1.8
PKD1-223ENST00000561668 NLRP13Q86W25 1043 aa26.31■■□□□ 1.8
PKD1-223ENST00000561668 GJD4Q96KN9 370 aaPredicted RBP26.31■■□□□ 1.8
PKD1-223ENST00000561668 ATRNO75882 1429 aa26.31■■□□□ 1.8
PKD1-223ENST00000561668 CCDC9Q9Y3X0 531 aaKnown RBP26.3■■□□□ 1.8
PKD1-223ENST00000561668 SLIT2O94813 1529 aa26.29■■□□□ 1.8
PKD1-223ENST00000561668 ST20-MTHFSA0A0A6YYL1 179 aa26.29■■□□□ 1.8
PKD1-223ENST00000561668 PRDM11Q9NQV5 511 aa26.29■■□□□ 1.8
PKD1-223ENST00000561668 TESK2Q96S53 571 aa26.28■■□□□ 1.8
PKD1-223ENST00000561668 TMC1Q8TDI8 760 aa26.27■■□□□ 1.8
PKD1-223ENST00000561668 BTG4Q9NY30 223 aa26.27■■□□□ 1.8
PKD1-223ENST00000561668 ABCA3Q99758 1704 aa26.26■■□□□ 1.79
PKD1-223ENST00000561668 PUS7Q96PZ0 661 aaKnown RBP26.26■■□□□ 1.79
PKD1-223ENST00000561668 USP47Q96K76 1375 aa26.25■■□□□ 1.79
PKD1-223ENST00000561668 NLRP6P59044 892 aa26.25■■□□□ 1.79
PKD1-223ENST00000561668 USP6P35125 1406 aa26.24■■□□□ 1.79
PKD1-223ENST00000561668 ZC3H6P61129 1189 aaKnown RBP26.24■■□□□ 1.79
PKD1-223ENST00000561668 VPS72Q15906 364 aa26.24■■□□□ 1.79
PKD1-223ENST00000561668 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
PKD1-223ENST00000561668 RGS12O14924 1447 aa26.22■■□□□ 1.79
PKD1-223ENST00000561668 HDGFL2Q7Z4V5 671 aaPredicted RBP26.21■■□□□ 1.79
PKD1-223ENST00000561668 NWD2Q9ULI1 1742 aa26.21■■□□□ 1.79
PKD1-223ENST00000561668 KTN1Q86UP2 1357 aaKnown RBP26.2■■□□□ 1.79
PKD1-223ENST00000561668 COL14A1Q05707 1796 aaKnown RBP26.2■■□□□ 1.78
PKD1-223ENST00000561668 KIAA0232Q92628 1395 aa26.2■■□□□ 1.78
PKD1-223ENST00000561668 PLCH1Q4KWH8 1693 aa26.19■■□□□ 1.78
PKD1-223ENST00000561668 GCP02774 474 aa26.19■■□□□ 1.78
PKD1-223ENST00000561668 CHRNA2Q15822 529 aa26.19■■□□□ 1.78
PKD1-223ENST00000561668 TERF2IPQ9NYB0 399 aa26.19■■□□□ 1.78
PKD1-223ENST00000561668 TTC21BQ7Z4L5 1316 aa26.18■■□□□ 1.78
PKD1-223ENST00000561668 EVA1CP58658 441 aa26.18■■□□□ 1.78
PKD1-223ENST00000561668 TMF1P82094 1093 aa26.18■■□□□ 1.78
PKD1-223ENST00000561668 TTC21AQ8NDW8 1320 aa26.17■■□□□ 1.78
PKD1-223ENST00000561668 SLC12A5Q9H2X9 1139 aa26.17■■□□□ 1.78
PKD1-223ENST00000561668 UPF1Q92900 1129 aaKnown RBP eCLIP26.16■■□□□ 1.78
PKD1-223ENST00000561668 CRYBG1Q9Y4K1 1723 aa26.16■■□□□ 1.78
PKD1-223ENST00000561668 USP19O94966 1318 aa26.15■■□□□ 1.78
PKD1-223ENST00000561668 CPSF1Q10570 1443 aaKnown RBP26.15■■□□□ 1.78
PKD1-223ENST00000561668 A0A0G2JS52 829 aa26.14■■□□□ 1.78
PKD1-223ENST00000561668 MYT1Q01538 1121 aa26.14■■□□□ 1.78
PKD1-223ENST00000561668 CDCA8Q53HL2 280 aa26.14■■□□□ 1.78
PKD1-223ENST00000561668 STRN4Q9NRL3 753 aa26.14■■□□□ 1.78
PKD1-223ENST00000561668 PHRF1Q9P1Y6 1649 aaKnown RBP26.14■■□□□ 1.77
PKD1-223ENST00000561668 SSH2Q76I76 1423 aa26.14■■□□□ 1.77
PKD1-223ENST00000561668 ZBTB7CA1YPR0 619 aa26.13■■□□□ 1.77
PKD1-223ENST00000561668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.13■■□□□ 1.77
PKD1-223ENST00000561668 SEPT12Q8IYM1 358 aa26.12■■□□□ 1.77
PKD1-223ENST00000561668 KCNH5Q8NCM2 988 aa26.12■■□□□ 1.77
PKD1-223ENST00000561668 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
PKD1-223ENST00000561668 CPDO75976 1380 aa26.11■■□□□ 1.77
PKD1-223ENST00000561668 ONECUT3O60422 494 aaPredicted RBP26.1■■□□□ 1.77
PKD1-223ENST00000561668 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
PKD1-223ENST00000561668 NINLQ9Y2I6 1382 aa26.09■■□□□ 1.77
PKD1-223ENST00000561668 GLI3P10071 1580 aa26.09■■□□□ 1.77
PKD1-223ENST00000561668 FAM98CQ17RN3 349 aaKnown RBP26.08■■□□□ 1.77
PKD1-223ENST00000561668 SPATA31A5Q5VU36 1347 aa26.08■■□□□ 1.77
PKD1-223ENST00000561668 SPATA31A7Q8IWB4 1347 aa26.08■■□□□ 1.77
PKD1-223ENST00000561668 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
PKD1-223ENST00000561668 SOX12O15370 315 aa26.06■■□□□ 1.76
PKD1-223ENST00000561668 NRAPQ86VF7 1730 aa26.05■■□□□ 1.76
PKD1-223ENST00000561668 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
PKD1-223ENST00000561668 CD163L1Q9NR16 1453 aa26.04■■□□□ 1.76
PKD1-223ENST00000561668 PIK3C2AO00443 1686 aa26.04■■□□□ 1.76
PKD1-223ENST00000561668 KRT27Q7Z3Y8 459 aa26.03■■□□□ 1.76
PKD1-223ENST00000561668 USP35Q9P2H5 1018 aa26.03■■□□□ 1.76
PKD1-223ENST00000561668 EDC4Q6P2E9 1401 aaKnown RBP26.03■■□□□ 1.76
PKD1-223ENST00000561668 MON2Q7Z3U7 1717 aa26.02■■□□□ 1.76
PKD1-223ENST00000561668 NME9Q86XW9 330 aa26.02■■□□□ 1.76
PKD1-223ENST00000561668 SPATA31A1Q5TZJ5 1347 aa26.02■■□□□ 1.76
PKD1-223ENST00000561668 A0A1W2PP64 1363 aa26.02■■□□□ 1.76
PKD1-223ENST00000561668 SLIT3O75094 1523 aa26.01■■□□□ 1.75
PKD1-223ENST00000561668 AATKQ6ZMQ8 1374 aa26.01■■□□□ 1.75
PKD1-223ENST00000561668 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
PKD1-223ENST00000561668 LARP1Q6PKG0 1096 aaKnown RBP26■■□□□ 1.75
PKD1-223ENST00000561668 CAMTA1Q9Y6Y1 1673 aa25.99■■□□□ 1.75
PKD1-223ENST00000561668 ARHGEF25Q86VW2 580 aa25.99■■□□□ 1.75
PKD1-223ENST00000561668 ZRANB1Q9UGI0 708 aa25.99■■□□□ 1.75
PKD1-223ENST00000561668 USP31Q70CQ4 1352 aa25.98■■□□□ 1.75
PKD1-223ENST00000561668 TCP11L2Q8N4U5 519 aa25.96■■□□□ 1.75
PKD1-223ENST00000561668 ANKRD36BQ8N2N9 1353 aa25.95■■□□□ 1.75
PKD1-223ENST00000561668 THRAP3Q9Y2W1 955 aaKnown RBP25.95■■□□□ 1.74
PKD1-223ENST00000561668 SF3B2Q13435 895 aaKnown RBP25.94■■□□□ 1.74
PKD1-223ENST00000561668 BARGINQ6ZT62 677 aa25.94■■□□□ 1.74
PKD1-223ENST00000561668 TOM1L2Q6ZVM7 507 aa25.94■■□□□ 1.74
PKD1-223ENST00000561668 COG3Q96JB2 828 aa25.94■■□□□ 1.74
PKD1-223ENST00000561668 POLR3GLQ9BT43 218 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms