RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 BAG6P46379 1132 aa36.7■■■■□ 3.47
NME3-202ENST00000561637 NBPF1Q3BBV0 1214 aa36.7■■■■□ 3.47
NME3-202ENST00000561637 ANKARQ7Z5J8 1434 aa36.69■■■■□ 3.46
NME3-202ENST00000561637 BTG4Q9NY30 223 aa36.67■■■■□ 3.46
NME3-202ENST00000561637 ALS2Q96Q42 1657 aa36.67■■■■□ 3.46
NME3-202ENST00000561637 RGPD1P0DJD0 1748 aa36.65■■■■□ 3.46
NME3-202ENST00000561637 FAM182BQ5T319 152 aa36.65■■■■□ 3.46
NME3-202ENST00000561637 COL14A1Q05707 1796 aaKnown RBP36.65■■■■□ 3.46
NME3-202ENST00000561637 WASLO00401 505 aaPredicted RBP36.64■■■■□ 3.46
NME3-202ENST00000561637 KIAA1210Q9ULL0 1709 aa36.64■■■■□ 3.46
NME3-202ENST00000561637 TULP4Q9NRJ4 1543 aa36.64■■■■□ 3.46
NME3-202ENST00000561637 EN1Q05925 392 aaPredicted RBP36.63■■■■□ 3.45
NME3-202ENST00000561637 L3MBTL2Q969R5 705 aa36.62■■■■□ 3.45
NME3-202ENST00000561637 CRYBG1Q9Y4K1 1723 aa36.59■■■■□ 3.45
NME3-202ENST00000561637 TNS1Q9HBL0 1735 aaKnown RBP36.58■■■■□ 3.45
NME3-202ENST00000561637 NEUROD1Q13562 356 aa36.57■■■■□ 3.44
NME3-202ENST00000561637 THSD7AQ9UPZ6 1657 aa36.56■■■■□ 3.44
NME3-202ENST00000561637 ATP7BP35670 1465 aa36.55■■■■□ 3.44
NME3-202ENST00000561637 SPATA31A5Q5VU36 1347 aa36.55■■■■□ 3.44
NME3-202ENST00000561637 SPATA31A7Q8IWB4 1347 aa36.55■■■■□ 3.44
NME3-202ENST00000561637 EIF3AQ14152 1382 aaKnown RBP36.53■■■■□ 3.44
NME3-202ENST00000561637 R3HDM1Q15032 1099 aaKnown RBP36.53■■■■□ 3.44
NME3-202ENST00000561637 GPRASP1Q5JY77 1395 aa36.51■■■■□ 3.43
NME3-202ENST00000561637 NUDT16Q96DE0 195 aaKnown RBP36.49■■■■□ 3.43
NME3-202ENST00000561637 CDK19Q9BWU1 502 aa36.49■■■■□ 3.43
NME3-202ENST00000561637 DISP2A7MBM2 1401 aa36.47■■■■□ 3.43
NME3-202ENST00000561637 EZH2Q15910 746 aaKnown RBP36.46■■■■□ 3.43
NME3-202ENST00000561637 NGDNQ8NEJ9 315 aaKnown RBP36.44■■■■□ 3.42
NME3-202ENST00000561637 PRDM11Q9NQV5 511 aa36.42■■■■□ 3.42
NME3-202ENST00000561637 TRPM1Q7Z4N2 1603 aa36.41■■■■□ 3.42
NME3-202ENST00000561637 PAK3O75914 559 aaPredicted RBP36.41■■■■□ 3.42
NME3-202ENST00000561637 ITSN1Q15811 1721 aa36.41■■■■□ 3.42
NME3-202ENST00000561637 TOPAZ1Q8N9V7 1692 aa36.41■■■■□ 3.42
NME3-202ENST00000561637 CENPJQ9HC77 1338 aaPredicted RBP36.39■■■■□ 3.42
NME3-202ENST00000561637 SPATA31A1Q5TZJ5 1347 aa36.38■■■■□ 3.41
NME3-202ENST00000561637 TRIM37O94972 964 aa36.38■■■■□ 3.41
NME3-202ENST00000561637 CAMKK2Q96RR4 588 aa36.38■■■■□ 3.41
NME3-202ENST00000561637 QRICH2Q9H0J4 1663 aa36.37■■■■□ 3.41
NME3-202ENST00000561637 KIAA0232Q92628 1395 aa36.37■■■■□ 3.41
NME3-202ENST00000561637 PHRF1Q9P1Y6 1649 aaKnown RBP36.37■■■■□ 3.41
NME3-202ENST00000561637 CHRNA2Q15822 529 aa36.36■■■■□ 3.41
NME3-202ENST00000561637 NBPF8Q3BBV2 869 aa36.35■■■■□ 3.41
NME3-202ENST00000561637 CABP2Q9NPB3 220 aa36.33■■■■□ 3.41
NME3-202ENST00000561637 STRN4Q9NRL3 753 aa36.33■■■■□ 3.41
NME3-202ENST00000561637 ACEP12821 1306 aa36.32■■■■□ 3.4
NME3-202ENST00000561637 TRIM26Q12899 539 aaPredicted RBP36.31■■■■□ 3.4
NME3-202ENST00000561637 FAM196AQ6ZSG2 479 aa36.31■■■■□ 3.4
NME3-202ENST00000561637 CCDC61Q9Y6R9 512 aa36.3■■■■□ 3.4
NME3-202ENST00000561637 RREB1Q92766 1687 aa36.29■■■■□ 3.4
NME3-202ENST00000561637 POLR3AO14802 1390 aaPredicted RBP36.29■■■■□ 3.4
NME3-202ENST00000561637 ROCK2O75116 1388 aaKnown RBP36.29■■■■□ 3.4
NME3-202ENST00000561637 SRPK2P78362 688 aaKnown RBP36.29■■■■□ 3.4
NME3-202ENST00000561637 APBA3O96018 575 aa36.28■■■■□ 3.4
NME3-202ENST00000561637 ZC3H6P61129 1189 aaKnown RBP36.28■■■■□ 3.4
NME3-202ENST00000561637 NUTM2GQ5VZR2 741 aa36.27■■■■□ 3.4
NME3-202ENST00000561637 NUP188Q5SRE5 1749 aa36.27■■■■□ 3.4
NME3-202ENST00000561637 PLEKHG3A1L390 1219 aa36.26■■■■□ 3.4
NME3-202ENST00000561637 USP35Q9P2H5 1018 aa36.26■■■■□ 3.4
NME3-202ENST00000561637 PPIP5K1Q6PFW1 1433 aa36.24■■■■□ 3.39
NME3-202ENST00000561637 PARD3Q8TEW0 1356 aa36.21■■■■□ 3.39
NME3-202ENST00000561637 SSH2Q76I76 1423 aa36.19■■■■□ 3.38
NME3-202ENST00000561637 CAMTA1Q9Y6Y1 1673 aa36.19■■■■□ 3.38
NME3-202ENST00000561637 BARGINQ6ZT62 677 aa36.18■■■■□ 3.38
NME3-202ENST00000561637 NRKQ7Z2Y5 1582 aa36.17■■■■□ 3.38
NME3-202ENST00000561637 EVA1CP58658 441 aa36.16■■■■□ 3.38
NME3-202ENST00000561637 PDE3BQ13370 1112 aa36.16■■■■□ 3.38
NME3-202ENST00000561637 LARP1Q6PKG0 1096 aaKnown RBP36.15■■■■□ 3.38
NME3-202ENST00000561637 CABP1Q9NZU7 370 aa36.15■■■■□ 3.38
NME3-202ENST00000561637 TONSLQ96HA7 1378 aa36.15■■■■□ 3.38
NME3-202ENST00000561637 LMO7Q8WWI1 1683 aa36.14■■■■□ 3.38
NME3-202ENST00000561637 EVC2Q86UK5 1308 aa36.09■■■■□ 3.37
NME3-202ENST00000561637 TCP11L2Q8N4U5 519 aa36.09■■■■□ 3.37
NME3-202ENST00000561637 ABTB2Q8N961 1025 aa36.08■■■■□ 3.37
NME3-202ENST00000561637 YY1P25490 414 aa36.07■■■■□ 3.36
NME3-202ENST00000561637 NBPF14Q5TI25 921 aa36.07■■■■□ 3.36
NME3-202ENST00000561637 PARP4Q9UKK3 1724 aaKnown RBP36.07■■■■□ 3.36
NME3-202ENST00000561637 CARD11Q9BXL7 1154 aa36.06■■■■□ 3.36
NME3-202ENST00000561637 USP6P35125 1406 aa36.06■■■■□ 3.36
NME3-202ENST00000561637 USP19O94966 1318 aa36.05■■■■□ 3.36
NME3-202ENST00000561637 CPDO75976 1380 aa36.04■■■■□ 3.36
NME3-202ENST00000561637 SBF2Q86WG5 1849 aa36.01■■■■□ 3.36
NME3-202ENST00000561637 PEAK1Q9H792 1746 aa36■■■■□ 3.35
NME3-202ENST00000561637 COL5A2P05997 1499 aaPredicted RBP35.99■■■■□ 3.35
NME3-202ENST00000561637 SPON1Q9HCB6 807 aa35.98■■■■□ 3.35
NME3-202ENST00000561637 THRAP3Q9Y2W1 955 aaKnown RBP35.98■■■■□ 3.35
NME3-202ENST00000561637 KCNQ2O43526 872 aa35.97■■■■□ 3.35
NME3-202ENST00000561637 GCP02774 474 aa35.96■■■■□ 3.35
NME3-202ENST00000561637 PPP1R1BQ9UD71 204 aaPredicted RBP35.96■■■■□ 3.35
NME3-202ENST00000561637 PIK3C2AO00443 1686 aa35.95■■■■□ 3.35
NME3-202ENST00000561637 NLRP13Q86W25 1043 aa35.94■■■■□ 3.34
NME3-202ENST00000561637 SBNO2Q9Y2G9 1366 aa35.93■■■■□ 3.34
NME3-202ENST00000561637 AKAP12Q02952 1782 aa35.92■■■■□ 3.34
NME3-202ENST00000561637 RGPD3A6NKT7 1758 aaPredicted RBP35.92■■■■□ 3.34
NME3-202ENST00000561637 RGPD4Q7Z3J3 1758 aa35.92■■■■□ 3.34
NME3-202ENST00000561637 BRD4O60885 1362 aaPredicted RBP35.91■■■■□ 3.34
NME3-202ENST00000561637 LRRC37A3O60309 1634 aa35.91■■■■□ 3.34
NME3-202ENST00000561637 NLRP6P59044 892 aa35.91■■■■□ 3.34
NME3-202ENST00000561637 CRB1P82279 1406 aa35.91■■■■□ 3.34
NME3-202ENST00000561637 OVOS2A0A0G2JMS6 1433 aa35.89■■■■□ 3.34
NME3-202ENST00000561637 OVOS2A0A0J9YW53 1432 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms