RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ALS2Q96Q42 1657 aa33.9■■■■□ 3.02
CDR2-202ENST00000561630 ATRNO75882 1429 aa33.9■■■■□ 3.02
CDR2-202ENST00000561630 PPIP5K1Q6PFW1 1433 aa33.9■■■■□ 3.02
CDR2-202ENST00000561630 SLIT2O94813 1529 aa33.89■■■■□ 3.02
CDR2-202ENST00000561630 UNC5CLQ8IV45 518 aa33.85■■■■□ 3.01
CDR2-202ENST00000561630 CABP1Q9NZU7 370 aa33.85■■■■□ 3.01
CDR2-202ENST00000561630 SBNO2Q9Y2G9 1366 aa33.85■■■■□ 3.01
CDR2-202ENST00000561630 CLSPNQ9HAW4 1339 aa33.84■■■■□ 3.01
CDR2-202ENST00000561630 ABCA3Q99758 1704 aa33.84■■■■□ 3.01
CDR2-202ENST00000561630 RGS12O14924 1447 aa33.83■■■■□ 3.01
CDR2-202ENST00000561630 FAM83GA6ND36 823 aa33.8■■■■□ 3
CDR2-202ENST00000561630 BRD4O60885 1362 aaPredicted RBP33.78■■■■□ 3
CDR2-202ENST00000561630 GJD4Q96KN9 370 aaPredicted RBP33.78■■■■□ 3
CDR2-202ENST00000561630 TIMELESSQ9UNS1 1208 aa33.76■■■□□ 2.99
CDR2-202ENST00000561630 ATAD2Q6PL18 1390 aa33.75■■■□□ 2.99
CDR2-202ENST00000561630 NUTM2GQ5VZR2 741 aa33.75■■■□□ 2.99
CDR2-202ENST00000561630 ABTB2Q8N961 1025 aa33.75■■■□□ 2.99
CDR2-202ENST00000561630 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.75■■■□□ 2.99
CDR2-202ENST00000561630 USP6P35125 1406 aa33.73■■■□□ 2.99
CDR2-202ENST00000561630 CRYBG1Q9Y4K1 1723 aa33.73■■■□□ 2.99
CDR2-202ENST00000561630 VPS72Q15906 364 aa33.71■■■□□ 2.99
CDR2-202ENST00000561630 PLCH1Q4KWH8 1693 aa33.69■■■□□ 2.98
CDR2-202ENST00000561630 BTG4Q9NY30 223 aa33.69■■■□□ 2.98
CDR2-202ENST00000561630 NWD2Q9ULI1 1742 aa33.69■■■□□ 2.98
CDR2-202ENST00000561630 ZNF692Q9BU19 519 aaPredicted RBP33.68■■■□□ 2.98
CDR2-202ENST00000561630 PRDM11Q9NQV5 511 aa33.68■■■□□ 2.98
CDR2-202ENST00000561630 USP19O94966 1318 aa33.68■■■□□ 2.98
CDR2-202ENST00000561630 SSH2Q76I76 1423 aa33.68■■■□□ 2.98
CDR2-202ENST00000561630 NLRP13Q86W25 1043 aa33.67■■■□□ 2.98
CDR2-202ENST00000561630 UPF1Q92900 1129 aaKnown RBP eCLIP33.67■■■□□ 2.98
CDR2-202ENST00000561630 ST20-MTHFSA0A0A6YYL1 179 aa33.66■■■□□ 2.98
CDR2-202ENST00000561630 KIAA0232Q92628 1395 aa33.66■■■□□ 2.98
CDR2-202ENST00000561630 COL14A1Q05707 1796 aaKnown RBP33.65■■■□□ 2.98
CDR2-202ENST00000561630 TESK2Q96S53 571 aa33.65■■■□□ 2.98
CDR2-202ENST00000561630 GLI3P10071 1580 aa33.64■■■□□ 2.98
CDR2-202ENST00000561630 CPSF1Q10570 1443 aaKnown RBP33.63■■■□□ 2.97
CDR2-202ENST00000561630 ZC3H6P61129 1189 aaKnown RBP33.63■■■□□ 2.97
CDR2-202ENST00000561630 PUS7Q96PZ0 661 aaKnown RBP33.63■■■□□ 2.97
CDR2-202ENST00000561630 PHRF1Q9P1Y6 1649 aaKnown RBP33.63■■■□□ 2.97
CDR2-202ENST00000561630 CCER1Q8TC90 406 aaPredicted RBP33.61■■■□□ 2.97
CDR2-202ENST00000561630 CCDC9Q9Y3X0 531 aaKnown RBP33.61■■■□□ 2.97
CDR2-202ENST00000561630 SLC24A1O60721 1099 aa33.6■■■□□ 2.97
CDR2-202ENST00000561630 TTC21BQ7Z4L5 1316 aa33.59■■■□□ 2.97
CDR2-202ENST00000561630 GCP02774 474 aa33.59■■■□□ 2.97
CDR2-202ENST00000561630 NLRP6P59044 892 aa33.59■■■□□ 2.97
CDR2-202ENST00000561630 CHRNA2Q15822 529 aa33.59■■■□□ 2.97
CDR2-202ENST00000561630 NRKQ7Z2Y5 1582 aa33.58■■■□□ 2.97
CDR2-202ENST00000561630 CPDO75976 1380 aa33.58■■■□□ 2.97
CDR2-202ENST00000561630 NRAPQ86VF7 1730 aa33.57■■■□□ 2.96
CDR2-202ENST00000561630 ONECUT3O60422 494 aaPredicted RBP33.57■■■□□ 2.96
CDR2-202ENST00000561630 KTN1Q86UP2 1357 aaKnown RBP33.57■■■□□ 2.96
CDR2-202ENST00000561630 USP47Q96K76 1375 aa33.57■■■□□ 2.96
CDR2-202ENST00000561630 TMC1Q8TDI8 760 aa33.55■■■□□ 2.96
CDR2-202ENST00000561630 TTC21AQ8NDW8 1320 aa33.54■■■□□ 2.96
CDR2-202ENST00000561630 SLC12A5Q9H2X9 1139 aa33.54■■■□□ 2.96
CDR2-202ENST00000561630 AKAP12Q02952 1782 aa33.52■■■□□ 2.96
CDR2-202ENST00000561630 CD163L1Q9NR16 1453 aa33.52■■■□□ 2.96
CDR2-202ENST00000561630 SEPT12Q8IYM1 358 aa33.52■■■□□ 2.96
CDR2-202ENST00000561630 PIK3C2AO00443 1686 aa33.51■■■□□ 2.95
CDR2-202ENST00000561630 EP400Q96L91 3159 aa33.51■■■□□ 2.95
CDR2-202ENST00000561630 SPATA31A5Q5VU36 1347 aa33.51■■■□□ 2.95
CDR2-202ENST00000561630 SPATA31A7Q8IWB4 1347 aa33.51■■■□□ 2.95
CDR2-202ENST00000561630 SLIT3O75094 1523 aa33.5■■■□□ 2.95
CDR2-202ENST00000561630 HDGFL2Q7Z4V5 671 aaPredicted RBP33.49■■■□□ 2.95
CDR2-202ENST00000561630 TERF2IPQ9NYB0 399 aa33.47■■■□□ 2.95
CDR2-202ENST00000561630 FAM98CQ17RN3 349 aaKnown RBP33.46■■■□□ 2.95
CDR2-202ENST00000561630 STRN4Q9NRL3 753 aa33.46■■■□□ 2.95
CDR2-202ENST00000561630 NINLQ9Y2I6 1382 aa33.46■■■□□ 2.95
CDR2-202ENST00000561630 TMF1P82094 1093 aa33.44■■■□□ 2.94
CDR2-202ENST00000561630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.44■■■□□ 2.94
CDR2-202ENST00000561630 CAMTA1Q9Y6Y1 1673 aa33.44■■■□□ 2.94
CDR2-202ENST00000561630 MON2Q7Z3U7 1717 aa33.44■■■□□ 2.94
CDR2-202ENST00000561630 EVA1CP58658 441 aa33.43■■■□□ 2.94
CDR2-202ENST00000561630 KCNH5Q8NCM2 988 aa33.43■■■□□ 2.94
CDR2-202ENST00000561630 SPATA31A1Q5TZJ5 1347 aa33.43■■■□□ 2.94
CDR2-202ENST00000561630 A0A1W2PP64 1363 aa33.43■■■□□ 2.94
CDR2-202ENST00000561630 LMO7Q8WWI1 1683 aa33.42■■■□□ 2.94
CDR2-202ENST00000561630 AATKQ6ZMQ8 1374 aa33.41■■■□□ 2.94
CDR2-202ENST00000561630 EDC4Q6P2E9 1401 aaKnown RBP33.41■■■□□ 2.94
CDR2-202ENST00000561630 USP31Q70CQ4 1352 aa33.4■■■□□ 2.94
CDR2-202ENST00000561630 A0A0G2JS52 829 aa33.4■■■□□ 2.94
CDR2-202ENST00000561630 MYT1Q01538 1121 aa33.4■■■□□ 2.94
CDR2-202ENST00000561630 KRT27Q7Z3Y8 459 aa33.38■■■□□ 2.93
CDR2-202ENST00000561630 ZBTB7CA1YPR0 619 aa33.37■■■□□ 2.93
CDR2-202ENST00000561630 LARP1Q6PKG0 1096 aaKnown RBP33.37■■■□□ 2.93
CDR2-202ENST00000561630 ARHGEF25Q86VW2 580 aa33.37■■■□□ 2.93
CDR2-202ENST00000561630 NME9Q86XW9 330 aa33.37■■■□□ 2.93
CDR2-202ENST00000561630 ZRANB1Q9UGI0 708 aa33.37■■■□□ 2.93
CDR2-202ENST00000561630 CDCA8Q53HL2 280 aa33.35■■■□□ 2.93
CDR2-202ENST00000561630 CCDC125Q86Z20 511 aa33.35■■■□□ 2.93
CDR2-202ENST00000561630 COL5A2P05997 1499 aaPredicted RBP33.35■■■□□ 2.93
CDR2-202ENST00000561630 SOX12O15370 315 aa33.34■■■□□ 2.93
CDR2-202ENST00000561630 BRWD3Q6RI45 1802 aa33.33■■■□□ 2.93
CDR2-202ENST00000561630 USP35Q9P2H5 1018 aa33.33■■■□□ 2.93
CDR2-202ENST00000561630 NFAT5O94916 1531 aa33.32■■■□□ 2.92
CDR2-202ENST00000561630 BARGINQ6ZT62 677 aa33.31■■■□□ 2.92
CDR2-202ENST00000561630 ANKRD36BQ8N2N9 1353 aa33.31■■■□□ 2.92
CDR2-202ENST00000561630 THSD7AQ9UPZ6 1657 aa33.3■■■□□ 2.92
CDR2-202ENST00000561630 TCP11L2Q8N4U5 519 aa33.3■■■□□ 2.92
CDR2-202ENST00000561630 AXIN2Q9Y2T1 843 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms