RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 PHF8Q9UPP1 1060 aa35.86■■■■□ 3.33
AP4E1-207ENST00000561441 ZRANB1Q9UGI0 708 aa35.85■■■■□ 3.33
AP4E1-207ENST00000561441 INSRP06213 1382 aa35.84■■■■□ 3.33
AP4E1-207ENST00000561441 DMRT2Q9Y5R5 561 aa35.83■■■■□ 3.33
AP4E1-207ENST00000561441 ZNF335Q9H4Z2 1342 aaPredicted RBP35.83■■■■□ 3.33
AP4E1-207ENST00000561441 SCAF1Q9H7N4 1312 aaKnown RBP35.83■■■■□ 3.33
AP4E1-207ENST00000561441 ESCO1Q5FWF5 840 aa35.82■■■■□ 3.32
AP4E1-207ENST00000561441 COG3Q96JB2 828 aa35.82■■■■□ 3.32
AP4E1-207ENST00000561441 TTC21AQ8NDW8 1320 aa35.81■■■■□ 3.32
AP4E1-207ENST00000561441 WDR43Q15061 677 aaKnown RBP eCLIP35.81■■■■□ 3.32
AP4E1-207ENST00000561441 ADAMTS8Q9UP79 889 aa35.8■■■■□ 3.32
AP4E1-207ENST00000561441 DCCP43146 1447 aa35.8■■■■□ 3.32
AP4E1-207ENST00000561441 CFAP53Q96M91 514 aa35.78■■■■□ 3.32
AP4E1-207ENST00000561441 ATF3P18847 181 aa35.77■■■■□ 3.32
AP4E1-207ENST00000561441 BLMP54132 1417 aaPredicted RBP35.76■■■■□ 3.32
AP4E1-207ENST00000561441 LRRC7Q96NW7 1537 aa35.76■■■■□ 3.31
AP4E1-207ENST00000561441 ZBED9Q6R2W3 1325 aa35.76■■■■□ 3.31
AP4E1-207ENST00000561441 C1orf167Q5SNV9 1468 aa35.76■■■■□ 3.31
AP4E1-207ENST00000561441 ORAI2Q96SN7 254 aa35.75■■■■□ 3.31
AP4E1-207ENST00000561441 OVOS2A0A0J9YW53 1432 aa35.74■■■■□ 3.31
AP4E1-207ENST00000561441 OVOS2Q6IE36 1432 aa35.74■■■■□ 3.31
AP4E1-207ENST00000561441 AATKQ6ZMQ8 1374 aa35.73■■■■□ 3.31
AP4E1-207ENST00000561441 MSH6P52701 1360 aa35.72■■■■□ 3.31
AP4E1-207ENST00000561441 MST1RQ04912 1400 aa35.72■■■■□ 3.31
AP4E1-207ENST00000561441 CADPS2Q86UW7 1296 aa35.72■■■■□ 3.31
AP4E1-207ENST00000561441 POLKQ9UBT6 870 aa35.72■■■■□ 3.31
AP4E1-207ENST00000561441 FBLN1P23142 703 aa35.71■■■■□ 3.31
AP4E1-207ENST00000561441 USP31Q70CQ4 1352 aa35.69■■■■□ 3.3
AP4E1-207ENST00000561441 XIRP1Q702N8 1843 aaKnown RBP35.69■■■■□ 3.3
AP4E1-207ENST00000561441 SHPRHQ149N8 1683 aa35.67■■■■□ 3.3
AP4E1-207ENST00000561441 PNPLA6Q8IY17 1366 aa35.67■■■■□ 3.3
AP4E1-207ENST00000561441 PSME1Q06323 249 aa35.67■■■■□ 3.3
AP4E1-207ENST00000561441 COL3A1P02461 1466 aaPredicted RBP35.65■■■■□ 3.3
AP4E1-207ENST00000561441 PIK3C2AO00443 1686 aa35.64■■■■□ 3.3
AP4E1-207ENST00000561441 SMG6Q86US8 1419 aaKnown RBP35.64■■■■□ 3.3
AP4E1-207ENST00000561441 SENP3-EIF4A1A0A087X0R7 540 aa35.63■■■■□ 3.29
AP4E1-207ENST00000561441 FOXO3O43524 673 aa35.63■■■■□ 3.29
AP4E1-207ENST00000561441 PAK3O75914 559 aaPredicted RBP35.62■■■■□ 3.29
AP4E1-207ENST00000561441 KIF1AQ12756 1690 aa35.62■■■■□ 3.29
AP4E1-207ENST00000561441 EMILIN1Q9Y6C2 1016 aa35.61■■■■□ 3.29
AP4E1-207ENST00000561441 PPM1GO15355 546 aaPredicted RBP35.59■■■■□ 3.29
AP4E1-207ENST00000561441 NLRP6P59044 892 aa35.59■■■■□ 3.29
AP4E1-207ENST00000561441 RRS1Q15050 365 aaKnown RBP35.59■■■■□ 3.29
AP4E1-207ENST00000561441 ABTB2Q8N961 1025 aa35.59■■■■□ 3.29
AP4E1-207ENST00000561441 MAP2P11137 1827 aaKnown RBP35.57■■■■□ 3.28
AP4E1-207ENST00000561441 CDK12Q9NYV4 1490 aaPredicted RBP35.56■■■■□ 3.28
AP4E1-207ENST00000561441 DIAPH1O60610 1272 aaKnown RBP35.56■■■■□ 3.28
AP4E1-207ENST00000561441 NUDCQ9Y266 331 aa35.56■■■■□ 3.28
AP4E1-207ENST00000561441 CCDC146Q8IYE0 955 aa35.54■■■■□ 3.28
AP4E1-207ENST00000561441 USP54Q70EL1 1684 aa35.54■■■■□ 3.28
AP4E1-207ENST00000561441 NUTM2GQ5VZR2 741 aa35.54■■■■□ 3.28
AP4E1-207ENST00000561441 XPCQ01831 940 aaPredicted RBP35.53■■■■□ 3.28
AP4E1-207ENST00000561441 KRT28Q7Z3Y7 464 aa35.53■■■■□ 3.28
AP4E1-207ENST00000561441 U2AF1L5P0DN76 240 aaPredicted RBP35.51■■■■□ 3.28
AP4E1-207ENST00000561441 U2AF1Q01081 240 aaKnown RBP eCLIP35.51■■■■□ 3.28
AP4E1-207ENST00000561441 SALL2Q9Y467 1007 aaPredicted RBP35.5■■■■□ 3.27
AP4E1-207ENST00000561441 MARF1Q9Y4F3 1742 aaKnown RBP35.49■■■■□ 3.27
AP4E1-207ENST00000561441 SOX12O15370 315 aa35.49■■■■□ 3.27
AP4E1-207ENST00000561441 U2SURPO15042 1029 aaKnown RBP35.48■■■■□ 3.27
AP4E1-207ENST00000561441 TRPM3Q9HCF6 1732 aaPredicted RBP35.46■■■■□ 3.27
AP4E1-207ENST00000561441 SLAIN2Q9P270 581 aa35.46■■■■□ 3.27
AP4E1-207ENST00000561441 RUNDC1Q96C34 613 aa35.45■■■■□ 3.27
AP4E1-207ENST00000561441 MAP3K19Q56UN5 1328 aa35.45■■■■□ 3.27
AP4E1-207ENST00000561441 APAF1O14727 1248 aa35.44■■■■□ 3.26
AP4E1-207ENST00000561441 IL13P35225 146 aa35.44■■■■□ 3.26
AP4E1-207ENST00000561441 BRINP3Q76B58 766 aa35.43■■■■□ 3.26
AP4E1-207ENST00000561441 NPHP3Q7Z494 1330 aa35.43■■■■□ 3.26
AP4E1-207ENST00000561441 DDX17Q92841 729 aaKnown RBP35.42■■■■□ 3.26
AP4E1-207ENST00000561441 PEAK1Q9H792 1746 aa35.4■■■■□ 3.26
AP4E1-207ENST00000561441 SBNO1A3KN83 1393 aa35.39■■■■□ 3.26
AP4E1-207ENST00000561441 LTBP4Q8N2S1 1624 aa35.38■■■■□ 3.25
AP4E1-207ENST00000561441 PDE3BQ13370 1112 aa35.38■■■■□ 3.25
AP4E1-207ENST00000561441 HSP90AB2PQ58FF8 381 aa35.36■■■■□ 3.25
AP4E1-207ENST00000561441 NGEFQ8N5V2 710 aa35.36■■■■□ 3.25
AP4E1-207ENST00000561441 FLT4P35916 1363 aa35.36■■■■□ 3.25
AP4E1-207ENST00000561441 LMOD2Q6P5Q4 547 aa35.35■■■■□ 3.25
AP4E1-207ENST00000561441 KCNH5Q8NCM2 988 aa35.35■■■■□ 3.25
AP4E1-207ENST00000561441 PLEKHF1Q96S99 279 aa35.35■■■■□ 3.25
AP4E1-207ENST00000561441 PXDNQ92626 1479 aa35.35■■■■□ 3.25
AP4E1-207ENST00000561441 KIF24Q5T7B8 1368 aa35.34■■■■□ 3.25
AP4E1-207ENST00000561441 IQSEC2Q5JU85 1478 aa35.34■■■■□ 3.25
AP4E1-207ENST00000561441 AMPHP49418 695 aa35.34■■■■□ 3.25
AP4E1-207ENST00000561441 EIF4A2Q14240 407 aaKnown RBP35.34■■■■□ 3.25
AP4E1-207ENST00000561441 TCP11L2Q8N4U5 519 aa35.34■■■■□ 3.25
AP4E1-207ENST00000561441 ZNF521Q96K83 1311 aa35.33■■■■□ 3.25
AP4E1-207ENST00000561441 NFAT5O94916 1531 aa35.33■■■■□ 3.25
AP4E1-207ENST00000561441 FCHSD2O94868 740 aa35.33■■■■□ 3.25
AP4E1-207ENST00000561441 ALS2Q96Q42 1657 aa35.33■■■■□ 3.25
AP4E1-207ENST00000561441 USP19O94966 1318 aa35.33■■■■□ 3.25
AP4E1-207ENST00000561441 PNNQ9H307 717 aaKnown RBP35.32■■■■□ 3.25
AP4E1-207ENST00000561441 SLIT3O75094 1523 aa35.32■■■■□ 3.24
AP4E1-207ENST00000561441 RSPH6AQ9H0K4 717 aa35.29■■■■□ 3.24
AP4E1-207ENST00000561441 GCP02774 474 aa35.28■■■■□ 3.24
AP4E1-207ENST00000561441 GTF3C3Q9Y5Q9 886 aa35.28■■■■□ 3.24
AP4E1-207ENST00000561441 TNS3Q68CZ2 1445 aa35.28■■■■□ 3.24
AP4E1-207ENST00000561441 HOXC9P31274 260 aa35.28■■■■□ 3.24
AP4E1-207ENST00000561441 CDCA7LQ96GN5 454 aa35.27■■■■□ 3.24
AP4E1-207ENST00000561441 SPATA31A3Q5VYP0 1347 aa35.27■■■■□ 3.24
AP4E1-207ENST00000561441 HMOX1P09601 288 aa35.26■■■■□ 3.24
AP4E1-207ENST00000561441 RTL1A6NKG5 1358 aa35.26■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms