RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 NUTM2DQ5VT03 806 aaPredicted RBP9.18□□□□□ -0.94
CASC4-211ENST00000561305 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
CASC4-211ENST00000561305 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
CASC4-211ENST00000561305 POLR3EQ9NVU0 708 aa9.18□□□□□ -0.94
CASC4-211ENST00000561305 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
CASC4-211ENST00000561305 PER1O15534 1290 aaPredicted RBP9.17□□□□□ -0.94
CASC4-211ENST00000561305 CTHP32929 405 aa9.17□□□□□ -0.94
CASC4-211ENST00000561305 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
CASC4-211ENST00000561305 ZNF511Q8NB15 262 aa9.17□□□□□ -0.94
CASC4-211ENST00000561305 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
CASC4-211ENST00000561305 SKIV2LQ15477 1246 aaKnown RBP9.16□□□□□ -0.94
CASC4-211ENST00000561305 HPS1Q92902 700 aa9.16□□□□□ -0.94
CASC4-211ENST00000561305 FAM117AQ9C073 453 aa9.16□□□□□ -0.94
CASC4-211ENST00000561305 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
CASC4-211ENST00000561305 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
CASC4-211ENST00000561305 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
CASC4-211ENST00000561305 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
CASC4-211ENST00000561305 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
CASC4-211ENST00000561305 MPNDQ8N594 471 aa9.13□□□□□ -0.95
CASC4-211ENST00000561305 HELBQ8NG08 1087 aaPredicted RBP9.13□□□□□ -0.95
CASC4-211ENST00000561305 TSC1Q92574 1164 aa9.12□□□□□ -0.95
CASC4-211ENST00000561305 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASC4-211ENST00000561305 PROCA1Q8NCQ7 364 aaPredicted RBP9.11□□□□□ -0.95
CASC4-211ENST00000561305 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
CASC4-211ENST00000561305 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
CASC4-211ENST00000561305 FBXO31Q5XUX0 539 aaPredicted RBP9.1□□□□□ -0.95
CASC4-211ENST00000561305 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
CASC4-211ENST00000561305 FOXJ1Q92949 421 aa9.09□□□□□ -0.95
CASC4-211ENST00000561305 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
CASC4-211ENST00000561305 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
CASC4-211ENST00000561305 ARMC2Q8NEN0 867 aa9.08□□□□□ -0.96
CASC4-211ENST00000561305 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
CASC4-211ENST00000561305 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
CASC4-211ENST00000561305 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
CASC4-211ENST00000561305 FAM174AQ8TBP5 190 aa9.07□□□□□ -0.96
CASC4-211ENST00000561305 CDK15Q96Q40 435 aa9.06□□□□□ -0.96
CASC4-211ENST00000561305 C11orf95C9JLR9 678 aaPredicted RBP9.05□□□□□ -0.96
CASC4-211ENST00000561305 SH3RF1Q7Z6J0 888 aa9.05□□□□□ -0.96
CASC4-211ENST00000561305 BPHLQ86WA6 291 aaPredicted RBP9.05□□□□□ -0.96
CASC4-211ENST00000561305 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
CASC4-211ENST00000561305 NBPF14Q5TI25 921 aa9.03□□□□□ -0.96
CASC4-211ENST00000561305 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
CASC4-211ENST00000561305 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
CASC4-211ENST00000561305 GPKOWQ92917 476 aaPredicted RBP eCLIP9.03□□□□□ -0.96
CASC4-211ENST00000561305 C1QTNF2Q9BXJ5 285 aa9.03□□□□□ -0.96
CASC4-211ENST00000561305 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
CASC4-211ENST00000561305 CAPN5O15484 640 aaPredicted RBP9.02□□□□□ -0.97
CASC4-211ENST00000561305 ADH1CP00326 375 aa9.02□□□□□ -0.97
CASC4-211ENST00000561305 NNTQ13423 1086 aa9.02□□□□□ -0.97
CASC4-211ENST00000561305 AGERQ15109 404 aa9.02□□□□□ -0.97
CASC4-211ENST00000561305 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
CASC4-211ENST00000561305 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
CASC4-211ENST00000561305 TRIM46Q7Z4K8 759 aa9□□□□□ -0.97
CASC4-211ENST00000561305 KIFC2Q96AC6 838 aa9□□□□□ -0.97
CASC4-211ENST00000561305 KLF16Q9BXK1 252 aaPredicted RBP9□□□□□ -0.97
CASC4-211ENST00000561305 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
CASC4-211ENST00000561305 AP1G2O75843 785 aa8.99□□□□□ -0.97
CASC4-211ENST00000561305 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
CASC4-211ENST00000561305 TIMP2P16035 220 aa8.99□□□□□ -0.97
CASC4-211ENST00000561305 GRM5P41594 1212 aa8.99□□□□□ -0.97
CASC4-211ENST00000561305 PDXDC2PQ6P474 469 aa8.99□□□□□ -0.97
CASC4-211ENST00000561305 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
CASC4-211ENST00000561305 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
CASC4-211ENST00000561305 NR5A1Q13285 461 aa8.98□□□□□ -0.97
CASC4-211ENST00000561305 ARID5BQ14865 1188 aa8.98□□□□□ -0.97
CASC4-211ENST00000561305 NR6A1Q15406 480 aa8.98□□□□□ -0.97
CASC4-211ENST00000561305 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
CASC4-211ENST00000561305 MAP4K5Q9Y4K4 846 aa8.98□□□□□ -0.97
CASC4-211ENST00000561305 ZC3H4Q9UPT8 1303 aaKnown RBP8.98□□□□□ -0.97
CASC4-211ENST00000561305 RFC5P40937 340 aa8.97□□□□□ -0.97
CASC4-211ENST00000561305 WDR4P57081 412 aaKnown RBP8.97□□□□□ -0.97
CASC4-211ENST00000561305 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
CASC4-211ENST00000561305 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
CASC4-211ENST00000561305 BMP1P13497 986 aa8.96□□□□□ -0.98
CASC4-211ENST00000561305 TREML4Q6UXN2 200 aa8.96□□□□□ -0.98
CASC4-211ENST00000561305 IL27Q8NEV9 243 aa8.96□□□□□ -0.98
CASC4-211ENST00000561305 MAGEB6P1A0A0J9YX57 407 aa8.95□□□□□ -0.98
CASC4-211ENST00000561305 NR3C2P08235 984 aa8.95□□□□□ -0.98
CASC4-211ENST00000561305 USP17L8P0C7I0 530 aa8.95□□□□□ -0.98
CASC4-211ENST00000561305 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
CASC4-211ENST00000561305 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
CASC4-211ENST00000561305 VASH1Q7L8A9 365 aaPredicted RBP8.93□□□□□ -0.98
CASC4-211ENST00000561305 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
CASC4-211ENST00000561305 ARHGAP9Q9BRR9 750 aa8.93□□□□□ -0.98
CASC4-211ENST00000561305 CARD14Q9BXL6 1004 aa8.93□□□□□ -0.98
CASC4-211ENST00000561305 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
CASC4-211ENST00000561305 GPSM3Q9Y4H4 160 aa8.93□□□□□ -0.98
CASC4-211ENST00000561305 ZIC2O95409 532 aaPredicted RBP8.92□□□□□ -0.98
CASC4-211ENST00000561305 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
CASC4-211ENST00000561305 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
CASC4-211ENST00000561305 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
CASC4-211ENST00000561305 ITPKCQ96DU7 683 aa8.92□□□□□ -0.98
CASC4-211ENST00000561305 ZFP42Q96MM3 310 aa8.92□□□□□ -0.98
CASC4-211ENST00000561305 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
CASC4-211ENST00000561305 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
CASC4-211ENST00000561305 FSHRP23945 695 aa8.91□□□□□ -0.98
CASC4-211ENST00000561305 WFS1O76024 890 aa8.9□□□□□ -0.98
CASC4-211ENST00000561305 PTK2Q05397 1052 aa8.9□□□□□ -0.98
CASC4-211ENST00000561305 CDV3Q9UKY7 258 aaKnown RBP8.9□□□□□ -0.98
CASC4-211ENST00000561305 TERTO14746 1132 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms