RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
SHF-211ENST00000561278 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
SHF-211ENST00000561278 NWD2Q9ULI1 1742 aa17.99■□□□□ 0.47
SHF-211ENST00000561278 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
SHF-211ENST00000561278 QRICH2Q9H0J4 1663 aa17.98■□□□□ 0.47
SHF-211ENST00000561278 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
SHF-211ENST00000561278 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
SHF-211ENST00000561278 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
SHF-211ENST00000561278 A0A0G2JS52 829 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 MYT1Q01538 1121 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 VPS72Q15906 364 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 CCDC61Q9Y6R9 512 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 ACEP12821 1306 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
SHF-211ENST00000561278 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
SHF-211ENST00000561278 NUTM2GQ5VZR2 741 aa17.94■□□□□ 0.46
SHF-211ENST00000561278 BTG4Q9NY30 223 aa17.94■□□□□ 0.46
SHF-211ENST00000561278 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
SHF-211ENST00000561278 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SHF-211ENST00000561278 NRAPQ86VF7 1730 aa17.93■□□□□ 0.46
SHF-211ENST00000561278 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
SHF-211ENST00000561278 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
SHF-211ENST00000561278 PHRF1Q9P1Y6 1649 aaKnown RBP17.92■□□□□ 0.46
SHF-211ENST00000561278 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
SHF-211ENST00000561278 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
SHF-211ENST00000561278 EP400Q96L91 3159 aa17.9■□□□□ 0.46
SHF-211ENST00000561278 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
SHF-211ENST00000561278 KIAA0232Q92628 1395 aa17.89■□□□□ 0.45
SHF-211ENST00000561278 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
SHF-211ENST00000561278 FAM98CQ17RN3 349 aaKnown RBP17.88■□□□□ 0.45
SHF-211ENST00000561278 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
SHF-211ENST00000561278 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
SHF-211ENST00000561278 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
SHF-211ENST00000561278 EVC2Q86UK5 1308 aa17.87■□□□□ 0.45
SHF-211ENST00000561278 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
SHF-211ENST00000561278 NRKQ7Z2Y5 1582 aa17.87■□□□□ 0.45
SHF-211ENST00000561278 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
SHF-211ENST00000561278 CCDC125Q86Z20 511 aa17.85■□□□□ 0.45
SHF-211ENST00000561278 STRN4Q9NRL3 753 aa17.85■□□□□ 0.45
SHF-211ENST00000561278 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
SHF-211ENST00000561278 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
SHF-211ENST00000561278 SF3B2Q13435 895 aaKnown RBP17.83■□□□□ 0.44
SHF-211ENST00000561278 USP6P35125 1406 aa17.82■□□□□ 0.44
SHF-211ENST00000561278 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
SHF-211ENST00000561278 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
SHF-211ENST00000561278 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
SHF-211ENST00000561278 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
SHF-211ENST00000561278 NLRP13Q86W25 1043 aa17.82■□□□□ 0.44
SHF-211ENST00000561278 USP19O94966 1318 aa17.81■□□□□ 0.44
SHF-211ENST00000561278 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
SHF-211ENST00000561278 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
SHF-211ENST00000561278 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
SHF-211ENST00000561278 EVA1CP58658 441 aa17.8■□□□□ 0.44
SHF-211ENST00000561278 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
SHF-211ENST00000561278 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 GCP02774 474 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 NLRP6P59044 892 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 CPDO75976 1380 aa17.78■□□□□ 0.44
SHF-211ENST00000561278 SPATA31A1Q5TZJ5 1347 aa17.77■□□□□ 0.44
SHF-211ENST00000561278 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
SHF-211ENST00000561278 FAM182BQ5T319 152 aa17.76■□□□□ 0.43
SHF-211ENST00000561278 DEFB132Q7Z7B7 95 aa17.76■□□□□ 0.43
SHF-211ENST00000561278 LMO7Q8WWI1 1683 aa17.76■□□□□ 0.43
SHF-211ENST00000561278 CAMTA1Q9Y6Y1 1673 aa17.76■□□□□ 0.43
SHF-211ENST00000561278 SLIT3O75094 1523 aa17.74■□□□□ 0.43
SHF-211ENST00000561278 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
SHF-211ENST00000561278 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
SHF-211ENST00000561278 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
SHF-211ENST00000561278 KTN1Q86UP2 1357 aaKnown RBP17.73■□□□□ 0.43
SHF-211ENST00000561278 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
SHF-211ENST00000561278 COL5A2P05997 1499 aaPredicted RBP17.72■□□□□ 0.43
SHF-211ENST00000561278 SOX12O15370 315 aa17.72■□□□□ 0.43
SHF-211ENST00000561278 BAG6P46379 1132 aa17.72■□□□□ 0.43
SHF-211ENST00000561278 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
SHF-211ENST00000561278 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
SHF-211ENST00000561278 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
SHF-211ENST00000561278 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
SHF-211ENST00000561278 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
SHF-211ENST00000561278 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
SHF-211ENST00000561278 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
SHF-211ENST00000561278 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
SHF-211ENST00000561278 CRB1P82279 1406 aa17.68■□□□□ 0.42
SHF-211ENST00000561278 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
SHF-211ENST00000561278 MON2Q7Z3U7 1717 aa17.68■□□□□ 0.42
SHF-211ENST00000561278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHF-211ENST00000561278 KCNH5Q8NCM2 988 aa17.67■□□□□ 0.42
SHF-211ENST00000561278 HDGFL2Q7Z4V5 671 aaPredicted RBP17.66■□□□□ 0.42
SHF-211ENST00000561278 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
SHF-211ENST00000561278 TNS1Q9HBL0 1735 aaKnown RBP17.65■□□□□ 0.42
SHF-211ENST00000561278 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
SHF-211ENST00000561278 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
SHF-211ENST00000561278 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
SHF-211ENST00000561278 CD163L1Q9NR16 1453 aa17.64■□□□□ 0.41
SHF-211ENST00000561278 TRIM37O94972 964 aa17.64■□□□□ 0.41
SHF-211ENST00000561278 NFAT5O94916 1531 aa17.63■□□□□ 0.41
SHF-211ENST00000561278 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
SHF-211ENST00000561278 SLC12A5Q9H2X9 1139 aa17.63■□□□□ 0.41
SHF-211ENST00000561278 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms