RNA–Protein interactions for RNA: ENST00000561224.5

PEX11A-204, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

TSL 4 BASIC

Gene PEX11A, Length 529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-204ENST00000561224 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.52
PEX11A-204ENST00000561224 PLEKHG3A1L390 1219 aa18.27■□□□□ 0.52
PEX11A-204ENST00000561224 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
PEX11A-204ENST00000561224 TOPAZ1Q8N9V7 1692 aa18.27■□□□□ 0.52
PEX11A-204ENST00000561224 SLIT2O94813 1529 aa18.27■□□□□ 0.51
PEX11A-204ENST00000561224 GJD4Q96KN9 370 aaPredicted RBP18.26■□□□□ 0.51
PEX11A-204ENST00000561224 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
PEX11A-204ENST00000561224 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
PEX11A-204ENST00000561224 CABP1Q9NZU7 370 aa18.25■□□□□ 0.51
PEX11A-204ENST00000561224 ALS2Q96Q42 1657 aa18.25■□□□□ 0.51
PEX11A-204ENST00000561224 ABCA3Q99758 1704 aa18.24■□□□□ 0.51
PEX11A-204ENST00000561224 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
PEX11A-204ENST00000561224 RALGAPBQ86X10 1494 aa18.24■□□□□ 0.51
PEX11A-204ENST00000561224 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
PEX11A-204ENST00000561224 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
PEX11A-204ENST00000561224 BTG4Q9NY30 223 aa18.22■□□□□ 0.51
PEX11A-204ENST00000561224 PLCH1Q4KWH8 1693 aa18.2■□□□□ 0.5
PEX11A-204ENST00000561224 VPS72Q15906 364 aa18.2■□□□□ 0.5
PEX11A-204ENST00000561224 ZC3H6P61129 1189 aaKnown RBP18.19■□□□□ 0.5
PEX11A-204ENST00000561224 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
PEX11A-204ENST00000561224 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
PEX11A-204ENST00000561224 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
PEX11A-204ENST00000561224 A0A0G2JS52 829 aa18.18■□□□□ 0.5
PEX11A-204ENST00000561224 MYT1Q01538 1121 aa18.18■□□□□ 0.5
PEX11A-204ENST00000561224 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
PEX11A-204ENST00000561224 USP6P35125 1406 aa18.17■□□□□ 0.5
PEX11A-204ENST00000561224 GLI3P10071 1580 aa18.17■□□□□ 0.5
PEX11A-204ENST00000561224 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
PEX11A-204ENST00000561224 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
PEX11A-204ENST00000561224 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
PEX11A-204ENST00000561224 SBNO2Q9Y2G9 1366 aa18.15■□□□□ 0.5
PEX11A-204ENST00000561224 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
PEX11A-204ENST00000561224 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
PEX11A-204ENST00000561224 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
PEX11A-204ENST00000561224 NLRP6P59044 892 aa18.14■□□□□ 0.49
PEX11A-204ENST00000561224 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
PEX11A-204ENST00000561224 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
PEX11A-204ENST00000561224 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
PEX11A-204ENST00000561224 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
PEX11A-204ENST00000561224 USP19O94966 1318 aa18.13■□□□□ 0.49
PEX11A-204ENST00000561224 FAM98CQ17RN3 349 aaKnown RBP18.12■□□□□ 0.49
PEX11A-204ENST00000561224 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
PEX11A-204ENST00000561224 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
PEX11A-204ENST00000561224 GCP02774 474 aa18.11■□□□□ 0.49
PEX11A-204ENST00000561224 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
PEX11A-204ENST00000561224 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
PEX11A-204ENST00000561224 NRAPQ86VF7 1730 aa18.1■□□□□ 0.49
PEX11A-204ENST00000561224 EVA1CP58658 441 aa18.1■□□□□ 0.49
PEX11A-204ENST00000561224 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
PEX11A-204ENST00000561224 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
PEX11A-204ENST00000561224 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
PEX11A-204ENST00000561224 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
PEX11A-204ENST00000561224 SOX12O15370 315 aa18.09■□□□□ 0.49
PEX11A-204ENST00000561224 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
PEX11A-204ENST00000561224 CLSPNQ9HAW4 1339 aa18.08■□□□□ 0.49
PEX11A-204ENST00000561224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
PEX11A-204ENST00000561224 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
PEX11A-204ENST00000561224 CPDO75976 1380 aa18.07■□□□□ 0.48
PEX11A-204ENST00000561224 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
PEX11A-204ENST00000561224 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
PEX11A-204ENST00000561224 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
PEX11A-204ENST00000561224 USP47Q96K76 1375 aa18.06■□□□□ 0.48
PEX11A-204ENST00000561224 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
PEX11A-204ENST00000561224 ONECUT3O60422 494 aaPredicted RBP18.06■□□□□ 0.48
PEX11A-204ENST00000561224 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
PEX11A-204ENST00000561224 TESK2Q96S53 571 aa18.06■□□□□ 0.48
PEX11A-204ENST00000561224 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
PEX11A-204ENST00000561224 PIK3C2AO00443 1686 aa18.05■□□□□ 0.48
PEX11A-204ENST00000561224 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
PEX11A-204ENST00000561224 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
PEX11A-204ENST00000561224 TIMELESSQ9UNS1 1208 aa18.04■□□□□ 0.48
PEX11A-204ENST00000561224 SLIT3O75094 1523 aa18.03■□□□□ 0.48
PEX11A-204ENST00000561224 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
PEX11A-204ENST00000561224 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
PEX11A-204ENST00000561224 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
PEX11A-204ENST00000561224 AKAP12Q02952 1782 aa18.02■□□□□ 0.47
PEX11A-204ENST00000561224 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 TMF1P82094 1093 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 NME9Q86XW9 330 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
PEX11A-204ENST00000561224 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
PEX11A-204ENST00000561224 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
PEX11A-204ENST00000561224 FAM182BQ5T319 152 aa18■□□□□ 0.47
PEX11A-204ENST00000561224 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
PEX11A-204ENST00000561224 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
PEX11A-204ENST00000561224 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
PEX11A-204ENST00000561224 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
PEX11A-204ENST00000561224 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
PEX11A-204ENST00000561224 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
PEX11A-204ENST00000561224 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
PEX11A-204ENST00000561224 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
PEX11A-204ENST00000561224 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
PEX11A-204ENST00000561224 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
PEX11A-204ENST00000561224 EP400Q96L91 3159 aa17.96■□□□□ 0.47
PEX11A-204ENST00000561224 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
PEX11A-204ENST00000561224 BARGINQ6ZT62 677 aa17.96■□□□□ 0.47
PEX11A-204ENST00000561224 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
PEX11A-204ENST00000561224 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms