RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
USP8-216ENST00000561206 PCDHGC3Q9UN70 934 aa10.46□□□□□ -0.73
USP8-216ENST00000561206 MDM2Q00987 491 aaPredicted RBP10.45□□□□□ -0.74
USP8-216ENST00000561206 GPR161Q8N6U8 529 aaKnown RBP10.44□□□□□ -0.74
USP8-216ENST00000561206 IRF6O14896 467 aa10.43□□□□□ -0.74
USP8-216ENST00000561206 FOXK2Q01167 660 aa10.43□□□□□ -0.74
USP8-216ENST00000561206 DESI1Q6ICB0 168 aa10.43□□□□□ -0.74
USP8-216ENST00000561206 FAM174AQ8TBP5 190 aa10.43□□□□□ -0.74
USP8-216ENST00000561206 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
USP8-216ENST00000561206 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
USP8-216ENST00000561206 FDX1P10109 184 aa10.42□□□□□ -0.74
USP8-216ENST00000561206 ZFAND3Q9H8U3 227 aa10.42□□□□□ -0.74
USP8-216ENST00000561206 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
USP8-216ENST00000561206 ZNF385CQ66K41 422 aaPredicted RBP10.41□□□□□ -0.74
USP8-216ENST00000561206 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
USP8-216ENST00000561206 NR5A1Q13285 461 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.74
USP8-216ENST00000561206 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 MEIOBQ8N635 442 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
USP8-216ENST00000561206 CNTNAP3BQ96NU0 1288 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 CNTNAP3Q9BZ76 1288 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.74
USP8-216ENST00000561206 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 XP32Q5T750 250 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 GPAT2Q6NUI2 795 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
USP8-216ENST00000561206 ARHGEF15O94989 841 aa10.38□□□□□ -0.75
USP8-216ENST00000561206 NR3C2P08235 984 aa10.38□□□□□ -0.75
USP8-216ENST00000561206 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
USP8-216ENST00000561206 KANK3Q6NY19 840 aa10.38□□□□□ -0.75
USP8-216ENST00000561206 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
USP8-216ENST00000561206 CLCN1P35523 988 aa10.36□□□□□ -0.75
USP8-216ENST00000561206 UPP2O95045 317 aa10.35□□□□□ -0.75
USP8-216ENST00000561206 BMP2P12643 396 aa10.35□□□□□ -0.75
USP8-216ENST00000561206 GRM5P41594 1212 aa10.35□□□□□ -0.75
USP8-216ENST00000561206 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
USP8-216ENST00000561206 SPDYE5A6NIY4 337 aa10.34□□□□□ -0.75
USP8-216ENST00000561206 IRS1P35568 1242 aa10.34□□□□□ -0.75
USP8-216ENST00000561206 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
USP8-216ENST00000561206 SPTLC1O15269 473 aa10.33□□□□□ -0.76
USP8-216ENST00000561206 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.33□□□□□ -0.762e-6■□□□□ 10.7
USP8-216ENST00000561206 SVOPQ8N4V2 548 aa10.33□□□□□ -0.76
USP8-216ENST00000561206 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
USP8-216ENST00000561206 PTSQ03393 145 aa10.3□□□□□ -0.76
USP8-216ENST00000561206 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
USP8-216ENST00000561206 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
USP8-216ENST00000561206 FOXJ1Q92949 421 aa10.3□□□□□ -0.76
USP8-216ENST00000561206 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
USP8-216ENST00000561206 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
USP8-216ENST00000561206 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
USP8-216ENST00000561206 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
USP8-216ENST00000561206 SCARF2Q96GP6 870 aaPredicted RBP10.29□□□□□ -0.76
USP8-216ENST00000561206 KRTAP4-8Q9BYQ9 185 aa10.29□□□□□ -0.76
USP8-216ENST00000561206 MTMR2Q13614 643 aa10.28□□□□□ -0.76
USP8-216ENST00000561206 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
USP8-216ENST00000561206 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
USP8-216ENST00000561206 ADAM23O75077 832 aa10.27□□□□□ -0.77
USP8-216ENST00000561206 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
USP8-216ENST00000561206 F12P00748 615 aaPredicted RBP10.26□□□□□ -0.77
USP8-216ENST00000561206 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
USP8-216ENST00000561206 CCDC155Q8N6L0 562 aa10.25□□□□□ -0.77
USP8-216ENST00000561206 C1QTNF2Q9BXJ5 285 aa10.25□□□□□ -0.77
USP8-216ENST00000561206 MAP4K5Q9Y4K4 846 aa10.25□□□□□ -0.77
USP8-216ENST00000561206 SLC35F4A4IF30 521 aa10.24□□□□□ -0.77
USP8-216ENST00000561206 NDUFV2P19404 249 aa10.24□□□□□ -0.77
USP8-216ENST00000561206 GJA5P36382 358 aa10.24□□□□□ -0.77
USP8-216ENST00000561206 MARSP56192 900 aaKnown RBP10.24□□□□□ -0.77
USP8-216ENST00000561206 CTHP32929 405 aa10.23□□□□□ -0.77
USP8-216ENST00000561206 BPHLQ86WA6 291 aaPredicted RBP10.23□□□□□ -0.77
USP8-216ENST00000561206 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
USP8-216ENST00000561206 ITGA6P23229 1130 aa10.2□□□□□ -0.78
USP8-216ENST00000561206 TRMT44Q8IYL2 757 aaKnown RBP10.2□□□□□ -0.78
USP8-216ENST00000561206 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
USP8-216ENST00000561206 MSTNO14793 375 aa10.19□□□□□ -0.78
USP8-216ENST00000561206 SPINT1O43278 529 aa10.19□□□□□ -0.78
USP8-216ENST00000561206 SH3RF1Q7Z6J0 888 aa10.19□□□□□ -0.78
USP8-216ENST00000561206 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
USP8-216ENST00000561206 PLA2G4EQ3MJ16 856 aa10.18□□□□□ -0.78
USP8-216ENST00000561206 SV2AQ7L0J3 742 aa10.18□□□□□ -0.78
USP8-216ENST00000561206 ITGB2P05107 769 aa10.17□□□□□ -0.78
USP8-216ENST00000561206 FSHRP23945 695 aa10.17□□□□□ -0.78
USP8-216ENST00000561206 Q6ZVU0 165 aa10.17□□□□□ -0.78
USP8-216ENST00000561206 VWA5B2Q8N398 1253 aa10.17□□□□□ -0.78
USP8-216ENST00000561206 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
USP8-216ENST00000561206 SPOCK3Q9BQ16 436 aa10.16□□□□□ -0.78
USP8-216ENST00000561206 FIGNL2A6NMB9 653 aa10.15□□□□□ -0.78
USP8-216ENST00000561206 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
USP8-216ENST00000561206 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
USP8-216ENST00000561206 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
USP8-216ENST00000561206 AGERQ15109 404 aa10.15□□□□□ -0.78
USP8-216ENST00000561206 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
USP8-216ENST00000561206 KRI1Q8N9T8 703 aaKnown RBP10.15□□□□□ -0.78
USP8-216ENST00000561206 DCAF5Q96JK2 942 aa10.14□□□□□ -0.79
USP8-216ENST00000561206 PROCP04070 461 aa10.13□□□□□ -0.79
USP8-216ENST00000561206 CELA2BP08218 269 aaPredicted RBP10.12□□□□□ -0.79
USP8-216ENST00000561206 VASH1Q7L8A9 365 aaPredicted RBP10.12□□□□□ -0.79
USP8-216ENST00000561206 ARMC2Q8NEN0 867 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms